Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 2.7e-214 748.4 382 100.0
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 7.2e-111 404.8 402 55.5
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 2.1e-102 376.7 406 51.2
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 1.8e-101 373.6 400 50.5
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.2e-100 370.9 393 53.2
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 1.5e-100 370.5 396 51.5
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 1.3e-99 367.5 388 52.1
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 7.0e-98 361.7 355 55.2
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 1.7e-96 357.1 393 51.9
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 1.7e-96 357.1 393 51.9
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 2.2e-96 356.7 395 50.4
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 5.0e-96 355.5 396 50.0
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 6.5e-96 355.1 410 49.5
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 2.5e-95 353.2 391 52.7
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 7.2e-95 351.7 416 47.8
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 9.4e-95 351.3 361 53.5
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 9.4e-95 351.3 406 50.0
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.6e-94 350.5 434 47.9
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 2.1e-94 350.1 399 51.1
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.0e-93 347.8 403 51.1
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 2.3e-93 346.7 403 50.1
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 2.0e-92 343.6 403 50.1
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 2.0e-92 343.6 400 50.0
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 2.6e-92 343.2 404 49.5
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 1.1e-90 337.8 399 48.4
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.4e-90 337.4 381 49.1
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 5.9e-89 332.0 383 49.6
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 7.7e-89 331.6 396 48.2
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 1.0e-88 331.3 398 48.2
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 6.6e-88 328.6 392 47.4
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 8.6e-88 328.2 392 47.7
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 1.5e-87 327.4 398 47.7
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 2.1e-86 323.6 375 49.1
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 4.7e-86 322.4 372 47.6
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 4.7e-86 322.4 377 48.8
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 1.8e-85 320.5 392 48.2
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 2.3e-85 320.1 365 49.6
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 2.3e-85 320.1 377 48.3
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 3.0e-85 319.7 396 46.0
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 4.0e-85 319.3 377 49.6
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 5.2e-85 318.9 372 47.3
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 1.2e-84 317.8 406 46.6
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 3.4e-84 316.2 396 47.2
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 5.7e-84 315.5 385 45.5
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 2.2e-83 313.5 403 45.2
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 2.9e-83 313.2 389 46.5
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 4.9e-83 312.4 382 46.1
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.4e-82 310.8 360 48.3
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 3.2e-82 309.7 353 48.2
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 4.1e-82 309.3 347 48.4
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 1.2e-81 307.8 322 53.7
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 4.6e-81 305.8 379 47.5
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 5.9e-81 305.4 366 49.2
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 5.9e-81 305.4 407 45.5
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 5.0e-80 302.4 390 45.1
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 6.6e-80 302.0 395 44.6
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.5e-79 300.8 337 50.1
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 1.5e-79 300.8 362 46.1
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 2.5e-79 300.1 359 50.1
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 4.3e-79 299.3 388 44.6
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 2.1e-78 297.0 389 44.7
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 3.6e-78 296.2 378 45.2
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 8.0e-78 295.0 320 52.5
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 8.0e-78 295.0 406 44.3
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 1.0e-77 294.7 345 46.7
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 1.4e-77 294.3 319 52.0
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.8e-77 293.9 373 47.2
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 3.1e-77 293.1 398 44.5
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 6.8e-77 292.0 390 45.6
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 6.8e-77 292.0 390 45.6
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 2.0e-76 290.4 390 45.9
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 3.4e-76 289.7 403 42.7
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 7.5e-76 288.5 367 44.1
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 9.8e-76 288.1 343 49.3
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 1.3e-75 287.7 394 44.7
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 1.7e-75 287.3 345 46.1
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 1.7e-75 287.3 350 47.4
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 2.9e-75 286.6 344 48.3
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 3.7e-75 286.2 337 47.2
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 1.9e-74 283.9 396 43.4
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 2.3e-72 276.9 395 42.8
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 7.3e-71 271.9 393 43.5
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 1.2e-70 271.2 356 44.9
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 6.2e-70 268.9 388 44.6
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 1.8e-69 267.3 381 43.3
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 3.1e-69 266.5 339 46.3
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 8.9e-69 265.0 321 46.7
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 1.5e-68 264.2 389 40.1
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 2.6e-68 263.5 397 41.6
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 5.8e-68 262.3 393 41.7
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 5.8e-68 262.3 342 45.6
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 1.9e-66 257.3 380 42.6
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 2.1e-65 253.8 341 45.7
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 7.8e-65 251.9 391 40.2
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 5.1e-64 249.2 384 40.9
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 8.6e-64 248.4 391 40.9
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 2.5e-63 246.9 391 40.2
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 2.5e-63 246.9 391 40.2
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 1.4e-61 241.1 333 42.0
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 3.1e-61 240.0 391 38.9
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 6.0e-57 225.7 176 61.4
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.7e-56 224.2 385 40.8
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 8.9e-53 211.8 288 44.4
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.3e-51 208.0 197 53.3
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 4.9e-51 206.1 201 50.2
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 7.1e-50 202.2 236 46.2
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.3e-48 198.0 222 50.9
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 6.4e-43 179.1 207 45.9
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 1.7e-40 171.0 150 55.3
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 2.2e-27 127.5 443 27.3
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 5.1e-24 116.3 92 57.6
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 1.1e-23 115.2 408 27.5
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 4.3e-23 113.2 190 41.6
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 5.7e-23 112.8 185 37.8
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 2.1e-22 110.9 267 32.6
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 2.6e-20 104.0 418 24.6
Peaxi162Scf00244g00111 Petunia axillaris HOM05D005759 ORTHO05D007172 1.0e-16 92.0 83 60.2
GSVIVG01034723001 Vitis vinifera HOM05D005759 ORTHO05D007172 2.5e-15 87.4 101 46.5
Lsat_1_v5_gn_7_84341 Lactuca sativa HOM05D005759 ORTHO05D007172 7.7e-12 75.9 96 43.8
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 1.4e-10 71.6 103 39.8
CBR_g23342 Chara braunii HOM05D005759 ORTHO05D002561 3.6e-09 67.0 413 23.7
FAN01G1973 Fragaria x ananassa HOM05D005759 ORTHO05D007172 5.1e-08 63.2 274 25.5
Ca_11766_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 1.3e-06 58.5 37 67.6


User provided reference genes

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