Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.7e-252 875.5 441 100.0
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.0e-193 680.2 405 81.7
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 9.6e-192 673.7 405 80.7
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.2e-189 666.8 405 79.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 9.9e-189 663.7 405 78.5
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 4.9e-188 661.4 405 78.8
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 6.4e-188 661.0 405 78.3
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.4e-187 659.8 404 78.7
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 2.1e-186 656.0 405 78.5
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.0e-185 653.7 407 78.1
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 8.7e-185 650.6 404 78.2
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.5e-184 649.8 405 78.8
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 5.6e-184 647.9 403 78.9
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 9.6e-184 647.1 406 78.1
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 6.2e-183 644.4 401 78.8
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.4e-182 643.3 405 77.0
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 2.4e-182 642.5 403 76.9
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.1e-182 642.1 402 79.1
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 3.1e-182 642.1 405 78.3
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.1e-182 642.1 403 78.2
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 3.1e-182 642.1 403 78.2
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.0e-182 641.7 401 78.8
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 6.9e-182 641.0 401 76.1
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 9.0e-182 640.6 404 78.2
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.2e-181 640.2 401 78.6
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.2e-181 640.2 405 76.8
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.0e-181 639.4 401 76.8
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 3.4e-181 638.6 405 76.0
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.5e-181 638.3 422 73.5
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 7.6e-181 637.5 405 78.0
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 7.6e-181 637.5 424 73.3
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.3e-180 636.7 403 77.7
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.3e-180 636.7 405 77.0
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 4.9e-180 634.8 422 73.7
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 6.4e-180 634.4 405 77.8
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 8.4e-180 634.0 401 77.1
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 1.1e-179 633.6 405 76.5
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 1.4e-179 633.3 405 76.3
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.4e-179 633.3 441 70.5
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 4.2e-179 631.7 401 78.1
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.5e-179 631.3 401 77.1
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 9.3e-179 630.6 401 77.1
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.2e-178 630.2 405 76.3
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.2e-178 630.2 412 75.5
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 2.1e-178 629.4 405 75.6
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.7e-178 629.0 427 73.1
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.7e-178 629.0 404 77.2
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.7e-178 629.0 403 75.4
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.5e-178 628.6 401 76.8
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 4.6e-178 628.2 412 76.0
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 4.6e-178 628.2 405 74.6
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.0e-177 627.1 412 75.5
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 1.0e-177 627.1 401 77.1
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 1.0e-177 627.1 418 73.0
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.3e-177 626.7 405 76.0
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.3e-177 626.7 402 76.4
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.8e-177 626.3 419 74.9
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.8e-177 626.3 401 76.3
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.8e-177 626.3 401 73.6
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 2.3e-177 625.9 401 76.6
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 3.9e-177 625.2 401 76.8
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 6.7e-177 624.4 400 75.5
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 6.7e-177 624.4 402 76.1
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 6.7e-177 624.4 400 77.8
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 6.7e-177 624.4 397 75.8
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 1.5e-176 623.2 405 76.3
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.9e-176 622.9 401 76.6
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 9.6e-176 620.5 405 74.3
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 1.6e-175 619.8 401 74.6
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 8.2e-175 617.5 401 75.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.4e-174 616.7 401 75.6
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 5.3e-174 614.8 401 75.3
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 6.9e-174 614.4 405 73.6
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 2.0e-173 612.8 401 74.6
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 2.6e-173 612.5 432 71.5
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 1.0e-172 610.5 403 74.2
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.9e-172 609.0 402 72.9
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 3.8e-172 608.6 401 76.1
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.1e-171 607.1 403 73.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.5e-171 605.9 403 73.7
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.6e-170 603.2 401 75.1
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 2.1e-170 602.8 403 72.5
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.7e-170 602.4 403 73.0
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.5e-170 602.1 401 73.6
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 4.6e-170 601.7 403 73.2
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 4.6e-170 601.7 403 73.2
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 4.6e-170 601.7 403 73.2
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 6.0e-170 601.3 403 72.7
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 3.9e-169 598.6 404 72.3
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 3.9e-169 598.6 403 73.0
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 5.1e-169 598.2 400 73.0
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 6.7e-169 597.8 400 73.0
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.3e-168 595.1 401 74.1
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 5.7e-168 594.7 400 72.5
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 5.7e-168 594.7 401 74.1
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.6e-167 593.2 404 72.0
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 1.8e-166 589.7 404 71.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 2.4e-166 589.3 400 71.5
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.7e-164 583.2 369 77.0
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.9e-164 582.4 407 69.8
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 5.5e-163 578.2 400 70.5
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 5.5e-163 578.2 411 68.9
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.2e-162 577.0 410 70.0
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.6e-162 576.6 403 69.5
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 4.6e-162 575.1 404 71.5
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.4e-161 573.5 400 69.5
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 7.4e-160 567.8 401 68.6
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.9e-155 553.1 404 67.1
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.6e-154 550.1 401 68.6
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.5e-152 543.5 401 66.3
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.7e-148 530.0 314 82.2
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 1.4e-137 493.8 412 59.0
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 5.0e-132 475.3 399 59.4
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 4.7e-130 468.8 406 57.4
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.0e-124 451.1 315 69.8
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 4.0e-113 412.5 403 54.6
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 5.4e-102 375.6 305 61.3
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.5e-99 367.5 357 54.3
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 5.4e-94 349.0 524 38.2
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 5.1e-84 315.8 202 75.2
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 7.3e-75 285.4 188 72.9
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 5.7e-59 232.6 194 59.8
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 2.4e-57 227.3 179 62.0
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 3.1e-57 226.9 179 62.0
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.3e-52 211.5 207 57.0
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 3.6e-45 186.8 145 68.3
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.8e-42 177.2 148 64.2
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 2.6e-35 154.1 125 64.0
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 4.1e-33 146.7 367 28.6
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 5.2e-28 129.8 98 67.3
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.7e-23 114.8 63 92.1
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 8.5e-23 112.5 60 86.7
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.8e-18 97.4 68 76.5
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 9.1e-17 92.4 65 69.2
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 2.7e-13 80.9 69 62.3


User provided reference genes

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