Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030192 Daucus carota HOM05D000742 ORTHO05D177254 3.2e-90 335.1 176 100.0
DCAR_025112 Daucus carota HOM05D000742 ORTHO05D176450 5.7e-79 297.7 213 79.3
DCAR_029483 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-46 189.5 116 87.9
DCAR_008239 Daucus carota HOM05D000742 ORTHO05D000924 7.0e-45 184.5 122 82.8
DCAR_014071 Daucus carota HOM05D000742 ORTHO05D178383 1.9e-34 149.8 94 86.2
DCAR_019852 Daucus carota HOM05D000742 ORTHO05D176806 1.6e-20 103.6 70 78.6
Actinidia25989 Actinidia chinensis HOM05D000742 ORTHO05D000924 7.9e-12 74.7 133 42.9
COL.COLO4_16965 Corchorus olitorius HOM05D000742 ORTHO05D000924 3.9e-11 72.4 166 34.9
Duzib084G0106 Durio zibethinus HOM05D000742 ORTHO05D000924 5.1e-11 72.0 167 32.9
Actinidia03353 Actinidia chinensis HOM05D000742 ORTHO05D000924 6.7e-11 71.6 167 35.9
TAR374G1002 Trochodendron aralioides HOM05D000742 ORTHO05D000924 6.7e-11 71.6 167 33.5
SGA_v2.0_scaffold44G16899 Striga asiatica HOM05D000742 ORTHO05D000924 2.5e-10 69.7 168 32.7
BraA03t14158Z Brassica rapa HOM05D000742 ORTHO05D000924 3.3e-10 69.3 168 33.3
Thhalv10025761m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 3.3e-10 69.3 167 34.1
Potri.001G138400 Populus trichocarpa HOM05D000742 ORTHO05D000924 3.3e-10 69.3 165 32.7
Nitab4.5_0001762g0030 Nicotiana tabacum HOM05D000742 ORTHO05D000924 5.6e-10 68.6 166 31.3
Thecc.05G215300 Theobroma cacao HOM05D000742 ORTHO05D000924 7.4e-10 68.2 168 33.3
Aa31LG6G470 Aethionema arabicum HOM05D000742 ORTHO05D000924 9.6e-10 67.8 168 32.1
Ciclev10016191m.g Citrus clementina HOM05D000742 ORTHO05D000924 9.6e-10 67.8 165 33.3
Duzib177G0694 Durio zibethinus HOM05D000742 ORTHO05D000924 9.6e-10 67.8 166 31.9
Gohir.A03G000044 Gossypium hirsutum HOM05D000742 ORTHO05D000924 9.6e-10 67.8 166 31.9
Medtr5g029640 Medicago truncatula HOM05D000742 ORTHO05D000924 9.6e-10 67.8 165 33.9
Psat0s2923g0040 Pisum sativum HOM05D000742 ORTHO05D000924 9.6e-10 67.8 165 33.9
Sp7g16390 Schrenkiella parvula HOM05D000742 ORTHO05D000924 9.6e-10 67.8 167 31.1
AT4G17720 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 1.3e-09 67.4 167 32.9
Lsat_1_v5_gn_6_3440 Lactuca sativa HOM05D000742 ORTHO05D000924 1.3e-09 67.4 136 33.8
Lalb_Chr09g0325561 Lupinus albus HOM05D000742 ORTHO05D000924 1.3e-09 67.4 165 32.7
Thecc.03G307700 Theobroma cacao HOM05D000742 ORTHO05D000924 1.3e-09 67.4 166 33.1
Atru.chr6.1630 Acer truncatum HOM05D000742 ORTHO05D000924 1.6e-09 67.0 164 31.7
BcaC06g33585 Brassica carinata HOM05D000742 ORTHO05D000924 1.6e-09 67.0 167 33.5
BcaNung04038 Brassica carinata HOM05D000742 ORTHO05D000924 1.6e-09 67.0 167 32.9
A03p50660 Brassica napus HOM05D000742 ORTHO05D000924 1.6e-09 67.0 167 32.9
C07p49050 Brassica napus HOM05D000742 ORTHO05D000924 1.6e-09 67.0 167 33.5
BolC7t45410H Brassica oleracea HOM05D000742 ORTHO05D000924 1.6e-09 67.0 167 33.5
Glyma.09G206900 Glycine max HOM05D000742 ORTHO05D000924 1.6e-09 67.0 166 32.5
Sabra01G0107200 Salix brachista HOM05D000742 ORTHO05D000924 1.6e-09 67.0 165 31.5
AL7G36850 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 2.1e-09 66.6 167 32.9
CARHR224440 Cardamine hirsuta HOM05D000742 ORTHO05D000924 2.1e-09 66.6 167 31.7
Ca_08148_v3 Cicer arietinum L. HOM05D000742 ORTHO05D000924 2.1e-09 66.6 165 33.9
Eucgr.E00244 Eucalyptus grandis HOM05D000742 ORTHO05D000924 2.1e-09 66.6 167 32.3
Duzib205G0173 Durio zibethinus HOM05D000742 ORTHO05D000924 2.8e-09 66.2 169 32.5
Nn1g01981 Nelumbo nucifera HOM05D000742 ORTHO05D000924 3.7e-09 65.9 166 31.9
Potri.003G095400 Populus trichocarpa HOM05D000742 ORTHO05D000924 3.7e-09 65.9 167 31.7
Glyma.01G015500 Glycine max HOM05D000742 ORTHO05D000924 4.8e-09 65.5 165 32.1
PGR042G0913 Punica granatum HOM05D000742 ORTHO05D000924 6.2e-09 65.1 176 31.8
Sabra03G0064300 Salix brachista HOM05D000742 ORTHO05D000924 6.2e-09 65.1 170 31.2
Carub.0007s2364 Capsella rubella HOM05D000742 ORTHO05D000924 8.1e-09 64.7 167 32.3
unitig_92.g28228 Utricularia gibba HOM05D000742 ORTHO05D000924 8.1e-09 64.7 162 32.7
GSVIVG01013098001 Vitis vinifera HOM05D000742 ORTHO05D000924 8.1e-09 64.7 167 32.3
GSVIVG01024381001 Vitis vinifera HOM05D000742 ORTHO05D000924 8.1e-09 64.7 166 31.9
BcaNung00064 Brassica carinata HOM05D000742 ORTHO05D000924 1.1e-08 64.3 167 32.3
Duzib128G1876 Durio zibethinus HOM05D000742 ORTHO05D000924 1.1e-08 64.3 165 31.5
Eucgr.E02851 Eucalyptus grandis HOM05D000742 ORTHO05D000924 1.1e-08 64.3 167 31.7
Gorai.003G184200 Gossypium raimondii HOM05D000742 ORTHO05D000924 1.1e-08 64.3 163 31.3
Manes.09G125200 Manihot esculenta HOM05D000742 ORTHO05D000924 1.1e-08 64.3 166 28.9
Phvul.002G138100 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 1.1e-08 64.3 165 30.9
TPR.G8079 Trifolium pratense HOM05D000742 ORTHO05D000924 1.1e-08 64.3 165 31.5
CDE06G2438 Ceratophyllum demersum HOM05D000742 ORTHO05D000924 1.4e-08 63.9 166 29.5
COL.COLO4_15225 Corchorus olitorius HOM05D000742 ORTHO05D000924 1.8e-08 63.5 165 30.9
Manes.17G010500 Manihot esculenta HOM05D000742 ORTHO05D000924 1.8e-08 63.5 163 31.9
Zm00001eb379100 Zea mays HOM05D000742 ORTHO05D000924 1.8e-08 63.5 167 31.1
Gohir.D03G051500 Gossypium hirsutum HOM05D000742 ORTHO05D000924 2.4e-08 63.2 166 31.3
Peaxi162Scf00170g00921 Petunia axillaris HOM05D000742 ORTHO05D000924 2.4e-08 63.2 166 31.9
CSS0044634 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 3.1e-08 62.8 167 31.1
Gorai.003G053100 Gossypium raimondii HOM05D000742 ORTHO05D000924 3.1e-08 62.8 165 30.9
Phvul.011G019600 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 3.1e-08 62.8 145 32.4
Sp6g27280 Schrenkiella parvula HOM05D000742 ORTHO05D000924 3.1e-08 62.8 142 35.2
Gohir.A02G141000 Gossypium hirsutum HOM05D000742 ORTHO05D000924 4.0e-08 62.4 165 30.9
Gohir.D03G175200 Gossypium hirsutum HOM05D000742 ORTHO05D000924 4.0e-08 62.4 163 30.7
Nitab4.5_0000021g0620 Nicotiana tabacum HOM05D000742 ORTHO05D000924 4.0e-08 62.4 166 30.1
Hma1.2p1_0572F.1_g181190 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 5.3e-08 62.0 134 35.8
Hma1.2p1_3278F.1_g334813 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 5.3e-08 62.0 134 35.8
Zm00001eb268790 Zea mays HOM05D000742 ORTHO05D000924 5.3e-08 62.0 166 31.3
BraA03t10126Z Brassica rapa HOM05D000742 ORTHO05D000924 6.9e-08 61.6 165 29.1
Migut.F00090 Erythranthe guttata HOM05D000742 ORTHO05D000924 6.9e-08 61.6 167 31.7
unitig_52.g17201 Utricularia gibba HOM05D000742 ORTHO05D000924 6.9e-08 61.6 168 30.4
VMungo1215G1061 Vigna mungo HOM05D000742 ORTHO05D000924 6.9e-08 61.6 168 29.8
Actinidia38431 Actinidia chinensis HOM05D000742 ORTHO05D000924 9.0e-08 61.2 168 32.1
BcaC09g51615 Brassica carinata HOM05D000742 ORTHO05D000924 9.0e-08 61.2 166 30.1
A01p09790 Brassica napus HOM05D000742 ORTHO05D000924 9.0e-08 61.2 166 30.1
C01p11420 Brassica napus HOM05D000742 ORTHO05D000924 9.0e-08 61.2 166 30.1
BolC1t01111H Brassica oleracea HOM05D000742 ORTHO05D000924 9.0e-08 61.2 166 30.1
CSS0025586 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 9.0e-08 61.2 167 32.3
Dinv28988 Davidia involucrata HOM05D000742 ORTHO05D000924 9.0e-08 61.2 104 39.4
Lsat_1_v5_gn_3_19600 Lactuca sativa HOM05D000742 ORTHO05D000924 9.0e-08 61.2 167 32.3
Oeu028871.1 Olea europaea HOM05D000742 ORTHO05D000924 9.0e-08 61.2 167 31.1
Thhalv10001235m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 1.2e-07 60.8 171 27.5
Lsat_1_v5_gn_9_47681 Lactuca sativa HOM05D000742 ORTHO05D000924 1.2e-07 60.8 170 29.4
CSS0034082 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 1.5e-07 60.5 167 32.3
CiPaw.11G097100 Carya illinoinensis HOM05D000742 ORTHO05D000924 1.5e-07 60.5 166 31.3
Lj2g0003405 Lotus japonicus HOM05D000742 ORTHO05D000924 1.5e-07 60.5 165 31.5
MSTRG.13746 Avicennia marina HOM05D000742 ORTHO05D000924 2.0e-07 60.1 167 29.9
Hma1.2p1_0572F.1_g181200 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 2.0e-07 60.1 166 31.3
Os06g0112400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 2.0e-07 60.1 167 30.5
AUR62028187 Chenopodium quinoa HOM05D000742 ORTHO05D000924 2.6e-07 59.7 167 31.7
AUR62028191 Chenopodium quinoa HOM05D000742 ORTHO05D000924 2.6e-07 59.7 167 31.7
Cc08_g03430 Coffea canephora HOM05D000742 ORTHO05D000924 2.6e-07 59.7 165 30.9
ECA246G1529 Erigeron canadensis HOM05D000742 ORTHO05D000924 2.6e-07 59.7 167 32.9
Nn3g19410 Nelumbo nucifera HOM05D000742 ORTHO05D000924 2.6e-07 59.7 104 38.5
Os04g0594400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 2.6e-07 59.7 104 39.4
Sed0027016 Sechium edule HOM05D000742 ORTHO05D000924 2.6e-07 59.7 151 29.8
VMungo0251G0220 Vigna mungo HOM05D000742 ORTHO05D000924 2.6e-07 59.7 165 31.5
AT5G16840 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 3.4e-07 59.3 161 29.8
BraA01t00923Z Brassica rapa HOM05D000742 ORTHO05D000924 3.4e-07 59.3 168 31.5
AUR62002074 Chenopodium quinoa HOM05D000742 ORTHO05D000924 3.4e-07 59.3 167 31.7
DCAR_024957 Daucus carota HOM05D000742 ORTHO05D000924 3.4e-07 59.3 166 33.1
Sc19g0000120 Simmondsia chinensis HOM05D000742 ORTHO05D000924 3.4e-07 59.3 166 30.1
Zm00001eb223750 Zea mays HOM05D000742 ORTHO05D000924 3.4e-07 59.3 131 32.1
Gohir.A13G087200 Gossypium hirsutum HOM05D000742 ORTHO05D000924 4.5e-07 58.9 163 30.1
Gohir.D13G092800 Gossypium hirsutum HOM05D000742 ORTHO05D000924 4.5e-07 58.9 163 30.1
Gorai.010G139900 Gossypium raimondii HOM05D000742 ORTHO05D000924 4.5e-07 58.9 163 30.1
Lsat_1_v5_gn_3_68461 Lactuca sativa HOM05D000742 ORTHO05D000924 4.5e-07 58.9 170 28.8
Lsat_1_v5_gn_4_36960 Lactuca sativa HOM05D000742 ORTHO05D000924 4.5e-07 58.9 170 28.8
Lsat_1_v5_gn_5_106901 Lactuca sativa HOM05D000742 ORTHO05D000924 4.5e-07 58.9 170 28.8
Lsat_1_v5_gn_7_39100 Lactuca sativa HOM05D000742 ORTHO05D000924 4.5e-07 58.9 170 28.8
Lj5g0000224 Lotus japonicus HOM05D000742 ORTHO05D000924 4.5e-07 58.9 172 29.7
QL12p001218 Quercus lobata HOM05D000742 ORTHO05D000924 4.5e-07 58.9 165 30.9
Zm00001eb223760 Zea mays HOM05D000742 ORTHO05D000924 4.5e-07 58.9 131 32.1
EL10Ac3g05064 Beta vulgaris HOM05D000742 ORTHO05D000924 5.8e-07 58.5 166 29.5
Eucgr.K00081 Eucalyptus grandis HOM05D000742 ORTHO05D000924 5.8e-07 58.5 172 31.4
Prupe.5G029900 Prunus persica HOM05D000742 ORTHO05D000924 5.8e-07 58.5 165 31.5
Zm00001eb055110 Zea mays HOM05D000742 ORTHO05D000924 5.8e-07 58.5 163 31.9
Zm00001eb390160 Zea mays HOM05D000742 ORTHO05D000924 5.8e-07 58.5 131 31.3
AL8G11430 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 7.6e-07 58.2 171 26.9
Carub.0006s1506 Capsella rubella HOM05D000742 ORTHO05D000924 7.6e-07 58.2 164 29.3
Ciclev10021732m.g Citrus clementina HOM05D000742 ORTHO05D000924 7.6e-07 58.2 167 29.3
Duzib251G0005 Durio zibethinus HOM05D000742 ORTHO05D000924 7.6e-07 58.2 168 31.5
Lj1C1033T24 Lonicera japonica HOM05D000742 ORTHO05D000924 7.6e-07 58.2 169 29.6
Actinidia08750 Actinidia chinensis HOM05D000742 ORTHO05D000924 9.9e-07 57.8 167 33.5
Aa31sc182G20 Aethionema arabicum HOM05D000742 ORTHO05D000924 9.9e-07 57.8 162 27.2
AL6G27860 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 9.9e-07 57.8 161 29.2
AT5G46870 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 9.9e-07 57.8 171 27.5
arahy.Tifrunner.gnm1.ann1.BGND9H Arachis hypogaea HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 30.3
arahy.Tifrunner.gnm1.ann1.YQJ5CI Arachis hypogaea HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 30.3
BcaB01g05247 Brassica carinata HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 27.3
C03p09270 Brassica napus HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 27.3
BolC3t13423H Brassica oleracea HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 27.3
Haze_08175 Corylus avellana HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 29.1
ECA233G3221 Erigeron canadensis HOM05D000742 ORTHO05D000924 9.9e-07 57.8 165 31.5
Peaxi162Scf00516g00664 Petunia axillaris HOM05D000742 ORTHO05D000924 9.9e-07 57.8 167 29.3
Prupe.2G327200 Prunus persica HOM05D000742 ORTHO05D000924 9.9e-07 57.8 166 31.9
Gorai.013G183100 Gossypium raimondii HOM05D000742 ORTHO05D000924 1.3e-06 57.4 165 28.5
Nn4g24464 Nelumbo nucifera HOM05D000742 ORTHO05D000924 1.3e-06 57.4 162 30.2
unitig_699.g19790 Utricularia gibba HOM05D000742 ORTHO05D000924 1.3e-06 57.4 167 27.5
Aqoxy3G02213 Aquilegia oxysepala HOM05D000742 ORTHO05D000924 1.7e-06 57.0 165 30.3
A03p08010 Brassica napus HOM05D000742 ORTHO05D000924 1.7e-06 57.0 148 29.7
Gohir.D13G161300 Gossypium hirsutum HOM05D000742 ORTHO05D000924 1.7e-06 57.0 165 28.5
Lalb_Chr01g0000891 Lupinus albus HOM05D000742 ORTHO05D000924 1.7e-06 57.0 153 29.4
Medtr8g066460 Medicago truncatula HOM05D000742 ORTHO05D000924 1.7e-06 57.0 165 29.1
VMungo1215G2472 Vigna mungo HOM05D000742 ORTHO05D000924 1.7e-06 57.0 162 30.2
Ah.12g055360 Amaranthus hybridus HOM05D000742 ORTHO05D000924 2.2e-06 56.6 163 29.4
CSS0026657 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 2.2e-06 56.6 167 31.1
TPR.G3362 Trifolium pratense HOM05D000742 ORTHO05D000924 2.2e-06 56.6 165 30.3
Cpa.g.sc43.92 Carica papaya HOM05D000742 ORTHO05D000924 2.9e-06 56.2 169 28.4
Ca_22659_v3 Cicer arietinum L. HOM05D000742 ORTHO05D000924 2.9e-06 56.2 165 29.7
Gohir.A13G156500 Gossypium hirsutum HOM05D000742 ORTHO05D000924 2.9e-06 56.2 166 28.9
Os03g0713600 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 2.9e-06 56.2 164 30.5
Phvul.003G283600 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 2.9e-06 56.2 165 30.3
Solyc03g097110.4 Solanum lycopersicum HOM05D000742 ORTHO05D000924 2.9e-06 56.2 167 31.1
Sopen03g027850 Solanum pennellii HOM05D000742 ORTHO05D000924 2.9e-06 56.2 167 31.1
PGSC0003DMG400003159 Solanum tuberosum HOM05D000742 ORTHO05D000924 2.9e-06 56.2 167 31.1
Zm00001eb430040 Zea mays HOM05D000742 ORTHO05D000924 2.9e-06 56.2 104 37.5
Migut.E00777 Erythranthe guttata HOM05D000742 ORTHO05D000924 3.8e-06 55.8 167 29.9
HanXRQChr16g0512511 Helianthus annuus HOM05D000742 ORTHO05D000924 3.8e-06 55.8 169 29.0
PGR042G0529 Punica granatum HOM05D000742 ORTHO05D000924 3.8e-06 55.8 164 28.7
Sc01g0007270 Simmondsia chinensis HOM05D000742 ORTHO05D000924 3.8e-06 55.8 149 32.2
Zm00001eb072190 Zea mays HOM05D000742 ORTHO05D000924 3.8e-06 55.8 103 37.9
Dinv01892 Davidia involucrata HOM05D000742 ORTHO05D000924 4.9e-06 55.5 105 33.3
HanXRQChr02g0049391 Helianthus annuus HOM05D000742 ORTHO05D000924 4.9e-06 55.5 188 29.8
Lalb_Chr17g0338401 Lupinus albus HOM05D000742 ORTHO05D000924 4.9e-06 55.5 162 29.6
vmacro00295 Vaccinium macrocarpon HOM05D000742 ORTHO05D000924 4.9e-06 55.5 167 29.9
vmacro00302 Vaccinium macrocarpon HOM05D000742 ORTHO05D000924 4.9e-06 55.5 167 29.9
CANSAT21G2445 Cannabis sativa HOM05D000742 ORTHO05D000924 6.4e-06 55.1 166 28.3
ClCG09G016890 Citrullus lanatus HOM05D000742 ORTHO05D000924 6.4e-06 55.1 150 31.3
Lj6C734G7 Lonicera japonica HOM05D000742 ORTHO05D000924 6.4e-06 55.1 105 37.1
Oeu006300.3 Olea europaea HOM05D000742 ORTHO05D000924 6.4e-06 55.1 104 36.5
TAR636G2913 Trochodendron aralioides HOM05D000742 ORTHO05D000924 6.4e-06 55.1 167 31.7
Zm00001eb036540 Zea mays HOM05D000742 ORTHO05D000924 6.4e-06 55.1 104 37.5
Zm00001eb429380 Zea mays HOM05D000742 ORTHO05D000924 6.4e-06 55.1 104 37.5
Dinv29150 Davidia involucrata HOM05D000329 ORTHO05D002813 8.4e-06 54.7 166 31.9
SalBow4G1577 Salvia bowleyana HOM05D000742 ORTHO05D000924 8.4e-06 54.7 166 28.9
Sed0019813 Sechium edule HOM05D000742 ORTHO05D000924 8.4e-06 54.7 166 31.9
THA.LOC104806694 Tarenaya hassleriana HOM05D000742 ORTHO05D000924 8.4e-06 54.7 166 30.1


User provided reference genes

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