Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 2.1e-163 578.9 287 100.0
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 8.9e-106 387.5 297 67.0
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 1.2e-105 387.1 239 77.8
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 1.5e-105 386.7 287 67.9
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 2.0e-105 386.3 301 66.1
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 5.8e-105 384.8 272 68.8
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 6.4e-104 381.3 296 66.2
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 8.4e-104 380.9 289 66.4
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 8.4e-104 380.9 222 79.7
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 1.1e-103 380.6 272 70.2
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.4e-103 380.2 236 75.8
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 1.4e-103 380.2 236 75.8
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 1.9e-103 379.8 269 69.5
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 4.2e-103 378.6 304 64.1
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 5.4e-103 378.3 217 82.5
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 1.6e-102 376.7 270 68.9
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 2.7e-102 375.9 289 66.8
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 4.6e-102 375.2 305 63.3
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 1.0e-101 374.0 295 65.4
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 1.3e-101 373.6 225 78.7
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 1.3e-101 373.6 224 78.1
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 1.3e-101 373.6 222 78.8
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 2.3e-101 372.9 299 64.9
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 2.3e-101 372.9 265 68.3
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 5.1e-101 371.7 274 68.2
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 8.7e-101 370.9 295 64.4
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 8.7e-101 370.9 270 68.1
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.1e-100 370.5 244 74.2
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 1.1e-100 370.5 217 78.3
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 1.1e-100 370.5 271 67.5
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 1.5e-100 370.2 295 64.1
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 1.9e-100 369.8 271 67.9
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 1.9e-100 369.8 305 62.6
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 2.5e-100 369.4 305 63.0
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 3.3e-100 369.0 226 76.5
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 3.3e-100 369.0 290 66.2
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 4.3e-100 368.6 211 81.0
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 7.3e-100 367.9 267 70.4
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 7.3e-100 367.9 272 68.8
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 7.3e-100 367.9 278 66.2
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 9.6e-100 367.5 267 70.0
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 9.6e-100 367.5 224 75.9
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 1.2e-99 367.1 237 74.3
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.6e-99 366.7 280 67.1
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 2.1e-99 366.3 267 67.4
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 2.1e-99 366.3 279 65.6
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 2.8e-99 365.9 269 68.4
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 3.6e-99 365.5 268 67.2
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 4.7e-99 365.2 296 64.9
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 4.7e-99 365.2 222 77.0
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 6.2e-99 364.8 242 73.1
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 6.2e-99 364.8 234 72.2
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 1.4e-98 363.6 224 76.3
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 1.4e-98 363.6 259 68.7
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.4e-98 363.6 237 73.0
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 1.4e-98 363.6 260 70.0
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 1.4e-98 363.6 297 64.3
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 1.8e-98 363.2 294 65.0
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 1.8e-98 363.2 290 63.8
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 1.2e-97 360.5 237 72.6
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 1.2e-97 360.5 211 78.7
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 1.5e-97 360.1 295 64.4
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 1.5e-97 360.1 284 65.8
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 1.5e-97 360.1 266 66.5
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 3.4e-97 359.0 211 79.1
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 7.6e-97 357.8 269 65.1
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 7.6e-97 357.8 225 73.3
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 7.6e-97 357.8 225 73.3
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 7.6e-97 357.8 242 73.1
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.7e-96 356.7 269 64.3
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 2.2e-96 356.3 275 63.6
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 2.2e-96 356.3 227 74.9
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.9e-96 355.9 281 65.8
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 3.8e-96 355.5 295 61.7
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 6.4e-96 354.8 240 71.2
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 6.4e-96 354.8 231 74.9
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 8.4e-96 354.4 225 72.9
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 1.9e-95 353.2 255 67.8
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 3.2e-95 352.4 292 62.7
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 3.2e-95 352.4 284 62.0
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 7.1e-95 351.3 224 73.2
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 2.1e-94 349.7 266 66.2
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 7.8e-94 347.8 279 62.7
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 1.0e-93 347.4 278 61.9
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 1.3e-93 347.1 254 67.7
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 2.3e-93 346.3 226 73.5
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 5.1e-93 345.1 243 70.8
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 8.7e-93 344.4 291 60.5
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 1.1e-92 344.0 264 64.4
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 1.1e-92 344.0 211 75.8
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.9e-92 343.2 226 71.2
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 5.6e-92 341.7 258 63.6
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 7.3e-92 341.3 259 65.3
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 1.6e-91 340.1 250 65.6
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 3.6e-91 339.0 226 69.9
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 9.0e-90 334.3 294 61.9
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 2.0e-89 333.2 212 72.6
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 5.8e-89 331.6 213 73.2
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 5.8e-89 331.6 219 70.3
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 5.8e-89 331.6 232 67.7
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 2.2e-88 329.7 179 89.4
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 6.7e-85 318.2 220 67.3
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 3.1e-82 309.3 211 66.4
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 5.3e-82 308.5 261 57.1
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 1.2e-78 297.4 171 80.7
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 7.9e-78 294.7 175 77.1
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 3.1e-74 282.7 175 71.4
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 2.1e-70 270.0 222 56.8
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 2.7e-70 269.6 222 56.3
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 1.3e-69 267.3 194 66.0
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.9e-68 263.5 232 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 2.5e-68 263.1 214 56.5
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 5.9e-65 251.9 210 62.4
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 1.9e-63 246.9 217 59.4
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.5e-63 246.5 215 55.8
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 1.6e-62 243.8 172 64.0
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 5.7e-60 235.3 236 49.6
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 1.5e-57 227.3 297 46.5
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 1.6e-25 120.9 86 66.3
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.3e-19 101.3 198 34.3
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 7.8e-17 92.0 63 65.1
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 8.0e-14 82.0 245 27.8
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 1.4e-13 81.3 54 74.1
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 3.4e-12 76.6 80 55.0
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 5.4e-10 69.3 91 40.7
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 1.6e-09 67.8 61 54.1
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 1.6e-09 67.8 61 54.1
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 2.7e-09 67.0 191 30.4
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 1.6e-06 57.8 55 43.6
Os07g0660400 Oryza sativa ssp. japonica HOM05D005787 ORTHO05D007011 2.1e-06 57.4 89 38.2


User provided reference genes

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