Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 4.0e-176 621.3 316 100.0
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 5.8e-175 617.5 316 98.7
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 6.1e-148 527.7 312 83.3
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 2.6e-146 522.3 314 82.8
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 3.1e-144 515.4 316 79.4
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 3.2e-141 505.4 311 80.4
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 3.6e-140 501.9 312 77.6
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 3.0e-139 498.8 293 84.0
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 8.8e-139 497.3 316 76.9
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 1.5e-138 496.5 311 77.2
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 1.5e-138 496.5 316 76.3
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 2.0e-138 496.1 304 80.6
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 5.7e-138 494.6 303 79.5
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 9.7e-138 493.8 315 76.8
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.3e-137 493.4 313 76.4
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.7e-137 493.0 315 75.6
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 2.2e-137 492.7 316 76.3
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 2.8e-137 492.3 313 76.4
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 4.8e-137 491.5 312 78.5
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 8.3e-137 490.7 313 76.7
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.1e-136 490.3 316 76.9
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 1.1e-136 490.3 313 76.0
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 1.8e-136 489.6 316 75.0
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 4.1e-136 488.4 311 74.3
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.2e-135 486.9 316 75.3
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 1.6e-135 486.5 315 74.9
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 4.5e-135 485.0 312 73.7
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 4.5e-135 485.0 310 75.8
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 6.5e-134 481.1 330 72.4
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 1.5e-133 479.9 311 74.3
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 5.5e-133 478.0 316 73.1
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 1.2e-132 476.9 316 72.5
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 1.6e-132 476.5 311 74.6
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.6e-132 476.5 314 73.6
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 2.1e-132 476.1 316 72.8
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 2.1e-132 476.1 310 76.5
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 2.7e-132 475.7 316 72.5
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 1.0e-131 473.8 312 72.1
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 1.0e-131 473.8 316 72.5
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 3.0e-131 472.2 316 71.5
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 3.0e-131 472.2 316 72.5
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 8.8e-131 470.7 312 71.2
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 1.5e-130 469.9 315 73.0
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 2.0e-130 469.5 316 71.8
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 2.6e-130 469.2 316 71.8
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 5.7e-130 468.0 286 80.1
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 1.7e-129 466.5 316 71.8
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 1.7e-129 466.5 312 71.2
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 2.2e-129 466.1 312 70.8
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 2.8e-129 465.7 313 71.2
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 3.7e-129 465.3 315 71.7
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 4.8e-129 464.9 316 71.2
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 8.3e-129 464.2 312 70.8
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.4e-128 462.6 315 72.1
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 4.1e-128 461.8 315 71.4
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 4.1e-128 461.8 316 69.9
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 5.4e-128 461.5 315 70.8
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 9.1e-128 460.7 316 71.2
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 1.6e-127 459.9 297 72.7
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 2.0e-127 459.5 316 70.9
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 2.0e-127 459.5 289 76.1
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 3.5e-127 458.8 299 71.6
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 6.6e-126 454.5 316 69.9
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 8.6e-126 454.1 312 69.9
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 8.6e-126 454.1 316 70.3
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 3.3e-125 452.2 316 68.7
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 7.2e-125 451.1 300 73.3
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 9.5e-125 450.7 315 68.6
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.2e-124 450.3 315 68.3
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 1.6e-124 449.9 312 70.2
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 2.8e-124 449.1 316 69.0
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 4.7e-124 448.4 314 68.8
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 4.7e-124 448.4 300 73.0
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 6.1e-124 448.0 343 64.7
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 6.1e-124 448.0 312 70.2
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 2.3e-123 446.0 316 67.4
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 3.0e-123 445.7 315 68.3
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 4.0e-123 445.3 297 71.7
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 6.8e-123 444.5 324 68.2
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 2.0e-122 443.0 303 72.3
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 7.5e-122 441.0 306 70.9
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 2.8e-121 439.1 314 66.6
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 3.7e-121 438.7 299 69.2
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 3.7e-121 438.7 313 67.7
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 1.1e-120 437.2 315 67.6
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 1.1e-120 437.2 315 67.6
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 3.2e-120 435.6 315 67.3
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 3.2e-120 435.6 315 67.3
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 4.1e-120 435.3 313 69.6
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 5.4e-120 434.9 317 65.9
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 7.0e-120 434.5 315 67.0
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 2.7e-119 432.6 293 70.3
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 1.0e-118 430.6 316 66.8
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 2.3e-118 429.5 311 66.9
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 2.3e-118 429.5 315 66.3
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 2.3e-118 429.5 329 63.8
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.3e-118 429.5 329 63.8
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.3e-118 429.5 329 63.8
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 1.1e-117 427.2 299 68.2
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 1.1e-117 427.2 312 65.7
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.1e-117 427.2 315 65.4
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 1.5e-117 426.8 315 66.0
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 1.5e-117 426.8 313 67.4
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 2.5e-117 426.0 299 67.9
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 3.3e-117 425.6 299 67.6
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 3.3e-117 425.6 299 67.6
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 7.3e-117 424.5 329 62.9
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.6e-116 423.3 313 66.1
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 3.6e-116 422.2 323 63.8
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 8.0e-116 421.0 339 61.9
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 2.0e-114 416.4 291 68.0
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 1.9e-112 409.8 345 60.6
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 4.6e-111 405.2 314 65.0
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 6.0e-111 404.8 271 69.0
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 7.8e-111 404.4 257 74.3
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 1.3e-110 403.7 315 64.1
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.1e-107 394.0 329 61.7
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.4e-104 382.9 245 71.8
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 5.4e-104 381.7 303 64.4
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.8e-100 369.4 315 61.0
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 5.6e-93 345.1 302 57.6
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.8e-91 340.1 235 70.6
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 8.9e-91 337.8 319 53.3
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 2.6e-90 336.3 229 69.0
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.7e-86 323.6 225 70.2
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 9.0e-83 311.2 276 58.0
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 9.0e-83 311.2 328 49.4
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 2.0e-82 310.1 314 52.2
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 1.5e-77 293.9 307 48.2
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 1.1e-75 287.7 290 54.1
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 3.9e-70 269.2 230 62.6
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 6.7e-70 268.5 306 46.4
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 1.3e-65 254.2 296 47.0
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 4.8e-52 209.1 187 61.0
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 2.9e-49 199.9 295 40.3
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 5.7e-37 159.1 103 73.8
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 8.5e-33 145.2 94 74.5
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 3.6e-31 139.8 93 71.0
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 1.1e-29 134.8 90 73.3
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 3.2e-24 116.7 79 69.6
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 3.5e-18 96.7 90 56.7
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 3.5e-18 96.7 90 56.7
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 3.2e-16 90.1 112 45.5
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 6.8e-14 82.4 90 52.2
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 7.5e-13 79.0 97 51.5


User provided reference genes

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