Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 6.2e-292 1006.9 571 100.0
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 1.6e-154 550.4 577 53.2
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 4.5e-149 532.3 571 55.5
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 4.9e-148 528.9 575 52.9
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 4.9e-148 528.9 592 51.4
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 1.6e-146 523.9 573 54.5
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 9.6e-144 514.6 575 51.7
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 2.9e-140 503.1 573 52.2
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 1.6e-138 497.3 577 50.1
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.8e-137 493.8 581 54.6
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 4.3e-136 489.2 570 50.5
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.4e-134 484.2 577 50.3
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 3.9e-129 466.1 578 48.8
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 6.7e-129 465.3 573 49.9
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 8.8e-129 464.9 571 49.4
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 9.7e-128 461.5 578 48.6
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 2.2e-127 460.3 566 51.6
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 1.8e-126 457.2 580 47.9
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 3.1e-126 456.4 543 48.8
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 5.3e-126 455.7 568 47.5
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 2.0e-125 453.8 572 50.0
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 5.9e-125 452.2 553 49.4
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 1.7e-124 450.7 576 47.4
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 1.9e-123 447.2 557 53.5
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.5e-123 446.8 575 46.6
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 9.4e-123 444.9 579 48.2
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.2e-122 444.5 575 47.5
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 1.6e-122 444.1 577 45.6
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 1.6e-122 444.1 547 46.8
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 2.7e-122 443.4 540 47.8
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 7.9e-122 441.8 602 52.0
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 3.9e-121 439.5 575 44.7
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 1.1e-120 438.0 560 49.1
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.3e-119 434.5 571 47.8
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.7e-119 433.0 540 47.4
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 8.2e-119 431.8 573 45.2
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 1.4e-118 431.0 521 46.4
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 1.8e-118 430.6 580 45.2
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 4.1e-118 429.5 555 45.6
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 4.5e-117 426.0 552 45.1
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 5.9e-117 425.6 557 47.4
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 1.0e-116 424.9 573 44.0
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 8.5e-116 421.8 570 43.3
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.2e-115 419.5 573 43.3
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 7.2e-115 418.7 552 44.2
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 8.0e-114 415.2 540 45.7
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 7.5e-112 408.7 571 44.5
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 7.5e-112 408.7 540 44.8
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 7.5e-112 408.7 576 41.8
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 4.8e-111 406.0 534 48.3
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 8.2e-111 405.2 590 42.9
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.1e-110 403.3 580 43.4
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.3e-110 402.5 546 42.9
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.6e-109 401.0 574 40.8
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 7.7e-109 398.7 585 43.4
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 7.7e-109 398.7 552 43.5
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 1.3e-108 397.9 570 41.8
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 5.0e-108 396.0 564 42.2
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 1.5e-107 394.4 555 42.0
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 1.5e-107 394.4 581 42.7
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.2e-107 393.3 579 42.1
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 3.2e-107 393.3 580 40.7
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 4.2e-107 392.9 564 41.5
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 5.5e-107 392.5 578 45.8
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.6e-106 391.0 569 42.0
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 1.6e-106 391.0 578 41.7
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 2.3e-105 387.1 576 42.7
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 5.2e-105 386.0 585 46.8
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 6.8e-105 385.6 629 41.0
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 2.0e-104 384.0 573 42.6
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 2.0e-104 384.0 573 42.4
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 1.3e-103 381.3 575 42.6
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.8e-103 380.2 573 42.8
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 6.3e-103 379.0 561 40.8
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 6.3e-103 379.0 561 40.8
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 1.1e-102 378.3 500 45.4
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.8e-102 377.5 535 42.2
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 1.8e-102 377.5 538 41.8
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 7.0e-102 375.6 540 43.5
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.0e-101 374.0 569 41.5
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.0e-101 374.0 540 43.3
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.7e-101 373.6 569 41.7
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 4.5e-101 372.9 579 39.6
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.0e-100 371.7 546 42.5
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.0e-100 371.7 569 41.3
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.3e-100 371.3 561 41.4
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 6.5e-100 369.0 461 50.3
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.1e-99 368.2 580 39.5
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 1.5e-99 367.9 537 41.0
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 3.2e-99 366.7 534 41.0
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.6e-98 364.4 571 39.9
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 8.0e-98 362.1 574 41.3
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 1.8e-97 360.9 576 38.7
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 1.2e-96 358.2 545 40.2
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 7.5e-96 355.5 470 48.5
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.7e-95 354.4 380 52.9
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.1e-94 351.7 569 40.8
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 6.6e-92 342.4 475 44.6
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 1.5e-91 341.3 591 37.4
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 3.3e-91 340.1 572 36.5
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 7.3e-91 339.0 546 39.2
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 8.0e-90 335.5 541 41.6
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 4.0e-89 333.2 575 37.9
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 1.2e-88 331.6 462 48.1
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 4.4e-88 329.7 552 37.5
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 9.8e-88 328.6 359 54.0
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 1.3e-87 328.2 569 35.7
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 3.7e-87 326.6 571 35.6
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 2.4e-86 323.9 569 35.3
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 3.2e-86 323.6 536 37.7
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 2.3e-84 317.4 569 34.8
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.0e-84 317.0 389 47.6
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 3.9e-84 316.6 568 36.1
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.6e-82 311.2 569 34.8
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 6.2e-82 309.3 569 34.4
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 1.3e-79 301.6 559 36.7
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.7e-77 293.9 573 40.8
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 3.3e-75 287.0 568 34.2
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 3.6e-74 283.5 577 33.4
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.8e-73 281.2 459 38.6
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.9e-71 273.9 431 39.4
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 7.1e-70 269.2 492 37.8
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.2e-69 268.5 568 33.3
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 7.8e-69 265.8 536 34.0
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.0e-68 265.4 233 62.2
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 6.6e-68 262.7 464 36.4
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.6e-61 241.5 233 54.1
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 7.8e-53 212.6 233 50.6
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 7.8e-53 212.6 412 32.0
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 9.9e-48 195.7 455 33.0
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.0e-44 185.7 255 44.3
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 2.3e-44 184.5 366 34.4
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.5e-43 181.8 233 43.8
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.1e-41 174.1 326 36.2
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 9.9e-40 169.1 336 33.0
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.1e-37 161.4 245 40.8
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 2.1e-37 161.4 159 58.5
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 7.4e-35 152.9 150 58.7
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 9.6e-35 152.5 150 58.0
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 5.3e-33 146.7 543 27.8
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 1.1e-30 139.0 570 24.4
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 9.3e-30 136.0 476 25.4
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 4.6e-29 133.7 507 25.2
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 3.3e-27 127.5 155 45.8
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.4e-25 121.3 144 41.7
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 5.3e-25 120.2 134 46.3
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.3e-25 120.2 112 55.4
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.2e-24 119.0 516 22.7
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 2.0e-24 118.2 151 39.7
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.6e-24 117.9 213 39.0
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.9e-23 114.4 545 23.3
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 2.7e-21 107.8 163 40.5
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 3.0e-20 104.4 126 48.4
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.1e-19 102.4 157 42.7
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.7e-19 100.1 96 56.2
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 2.8e-18 97.8 532 22.7
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 6.9e-17 93.2 121 42.1
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.5e-16 92.0 112 40.2
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 5.0e-15 87.0 204 27.5
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 8.5e-15 86.3 162 33.3
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.9e-14 85.1 91 50.5
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 3.9e-12 77.4 115 40.0
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 5.1e-12 77.0 178 28.7
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 8.8e-12 76.3 95 43.2
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.3e-11 74.3 78 50.0
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 5.7e-11 73.6 111 38.7
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 7.4e-11 73.2 123 36.6
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 8.2e-10 69.7 111 37.8
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 8.2e-10 69.7 58 58.6
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.4e-09 68.9 60 58.3
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.4e-09 68.9 60 58.3
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.5e-08 65.5 66 51.5
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 5.9e-08 63.5 66 53.0
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 2.2e-07 61.6 75 40.0
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 2.2e-07 61.6 53 56.6
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 6.5e-07 60.1 77 46.8
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 8.5e-07 59.7 70 47.1
Actinidia17466 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.4e-06 58.9 145 31.7
GSVIVG01023070001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.9e-06 58.5 54 55.6


User provided reference genes

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