Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028870 Daucus carota HOM05D004403 ORTHO05D006164 1.6e-91 339.3 164 100.0
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 7.2e-76 287.3 158 89.9
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 3.3e-73 278.5 157 87.3
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 1.2e-67 260.0 158 80.4
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 2.3e-66 255.8 158 80.4
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 5.2e-66 254.6 159 81.1
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 5.7e-65 251.1 159 81.1
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 7.5e-65 250.8 159 79.9
Psat1g115160 Pisum sativum HOM05D004403 ORTHO05D006164 7.5e-65 250.8 158 77.2
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 2.2e-64 249.2 159 78.0
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 3.7e-64 248.4 158 76.6
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 8.2e-64 247.3 159 76.1
Dinv22934 Davidia involucrata HOM05D004403 ORTHO05D006164 1.4e-63 246.5 159 78.6
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 1.4e-63 246.5 158 76.6
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 1.8e-63 246.1 159 78.0
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 1.8e-63 246.1 158 77.2
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 1.8e-63 246.1 160 78.1
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 2.4e-63 245.7 159 74.8
TAR375G0129 Trochodendron aralioides HOM05D004403 ORTHO05D006164 3.1e-63 245.4 159 76.7
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 4.1e-63 245.0 158 75.9
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 5.3e-63 244.6 158 75.9
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 5.3e-63 244.6 158 77.2
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 5.3e-63 244.6 158 77.2
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 5.3e-63 244.6 158 77.2
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 7.0e-63 244.2 159 76.1
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 7.0e-63 244.2 158 75.9
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 9.1e-63 243.8 159 77.4
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 9.1e-63 243.8 159 77.4
COL.COLO4_14185 Corchorus olitorius HOM05D004403 ORTHO05D006164 9.1e-63 243.8 159 77.4
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 9.1e-63 243.8 158 75.9
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 1.2e-62 243.4 158 75.3
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 1.6e-62 243.0 159 78.0
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 1.6e-62 243.0 159 77.4
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 2.0e-62 242.7 159 76.7
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 2.7e-62 242.3 159 76.1
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 3.5e-62 241.9 159 75.5
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 3.5e-62 241.9 157 76.4
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 3.5e-62 241.9 159 74.8
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 7.7e-62 240.7 158 75.9
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 7.7e-62 240.7 158 75.9
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 1.0e-61 240.4 158 74.1
TPR.G11029 Trifolium pratense HOM05D004403 ORTHO05D006164 1.0e-61 240.4 158 76.6
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 1.3e-61 240.0 159 74.8
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 1.3e-61 240.0 157 75.8
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 1.3e-61 240.0 158 76.6
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 1.7e-61 239.6 159 76.1
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 2.9e-61 238.8 159 74.2
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 2.9e-61 238.8 157 75.2
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 5.0e-61 238.0 159 74.8
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 5.0e-61 238.0 159 74.8
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 1.5e-60 236.5 157 73.9
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 2.5e-60 235.7 159 74.2
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 3.2e-60 235.3 158 75.3
ClCG09G013390 Citrullus lanatus HOM05D004403 ORTHO05D006164 4.2e-60 235.0 154 74.7
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 5.5e-60 234.6 159 74.8
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 9.4e-60 233.8 158 73.4
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 1.6e-59 233.0 159 74.8
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 1.6e-59 233.0 158 74.7
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 2.1e-59 232.6 159 73.6
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 1.0e-58 230.3 159 74.8
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 1.4e-58 229.9 158 73.4
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 1.4e-58 229.9 158 73.4
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 2.3e-58 229.2 192 65.6
CDE12G0834 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 5.2e-58 228.0 158 70.9
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 6.8e-58 227.6 159 72.3
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 1.5e-57 226.5 158 67.7
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 2.0e-57 226.1 157 72.0
SEGI_12165 Sequoiadendron giganteum HOM05D004403 ORTHO05D006164 7.5e-57 224.2 156 69.9
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 1.3e-56 223.4 158 67.7
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 1.3e-56 223.4 158 67.7
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 2.2e-56 222.6 158 72.8
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 2.8e-56 222.2 159 70.4
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 2.8e-56 222.2 159 70.4
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.8e-56 221.5 159 71.7
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.8e-56 221.5 159 71.7
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 4.8e-56 221.5 159 71.7
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 1.4e-55 219.9 159 71.1
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.4e-55 219.9 159 71.1
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.4e-55 219.9 159 71.1
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 5.4e-55 218.0 158 68.4
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 7.0e-55 217.6 158 69.6
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 1.0e-53 213.8 198 59.1
HPP92_003527 Vanilla planifolia HOM05D004403 ORTHO05D006164 1.0e-53 213.8 159 66.0
CARHR264440 Cardamine hirsuta HOM05D004403 ORTHO05D006164 1.3e-53 213.4 158 68.4
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 2.3e-53 212.6 158 68.4
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 2.3e-53 212.6 158 66.5
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 2.9e-53 212.2 158 67.1
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 2.9e-53 212.2 158 67.1
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 2.9e-53 212.2 158 67.1
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 2.9e-53 212.2 158 67.1
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 2.9e-53 212.2 158 67.1
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.1e-52 210.3 158 68.4
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 1.5e-52 209.9 158 66.5
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 2.5e-52 209.1 156 68.6
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 4.2e-52 208.4 158 66.5
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 1.6e-51 206.5 137 73.0
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 6.8e-50 201.1 158 65.8
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 8.9e-50 200.7 156 64.1
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.2e-49 200.3 146 69.9
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 7.5e-49 197.6 156 62.2
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 2.8e-48 195.7 156 61.5
Lsat_1_v5_gn_5_118921 Lactuca sativa HOM05D004403 ORTHO05D006164 7.3e-44 181.0 129 72.1
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 1.4e-42 176.8 156 57.1
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 5.4e-39 164.9 131 66.4
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 7.0e-39 164.5 155 57.4
MD07G1258300 Malus domestica HOM05D004403 ORTHO05D006164 1.9e-36 156.4 118 66.1
CDE12G0971 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 1.6e-19 100.1 93 60.2
MCO07G456 Micromonas commoda HOM05D004403 ORTHO05D006164 5.8e-17 91.7 166 36.1
Cre13.g573450 Chlamydomonas reinhardtii HOM05D004403 ORTHO05D006164 2.8e-11 72.8 168 31.5
TAR374G0906 Trochodendron aralioides HOM05D004403 ORTHO05D006164 6.4e-08 61.6 49 67.3
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 1.6e-06 57.0 37 75.7
Dinv28530 Davidia involucrata HOM05D004403 ORTHO05D006164 3.5e-06 55.8 34 73.5


User provided reference genes

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