Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 1.7e-126 456.1 243 100.0
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 6.7e-62 241.5 247 57.5
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 4.2e-32 142.5 209 47.4
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 2.1e-31 140.2 215 44.2
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.0e-30 137.9 234 39.7
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 1.2e-29 134.4 222 40.1
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 9.8e-29 131.3 220 40.0
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.3e-28 131.0 230 40.4
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 4.8e-28 129.0 157 47.8
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 6.3e-28 128.6 215 40.5
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 6.3e-28 128.6 217 38.2
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 6.3e-28 128.6 188 44.1
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.1e-27 127.9 208 39.4
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 2.4e-27 126.7 229 36.7
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 3.1e-27 126.3 217 42.9
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 5.4e-27 125.6 236 38.1
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 7.0e-27 125.2 225 38.2
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 7.0e-27 125.2 188 42.0
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 1.2e-26 124.4 217 37.8
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.6e-26 124.0 214 41.1
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 1.6e-26 124.0 192 46.4
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 2.7e-26 123.2 186 44.1
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.7e-26 123.2 211 38.9
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 3.5e-26 122.9 217 37.3
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 5.9e-26 122.1 204 39.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 1.3e-25 120.9 220 38.6
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 3.8e-25 119.4 220 36.8
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 5.0e-25 119.0 220 38.2
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 5.0e-25 119.0 219 37.0
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 5.0e-25 119.0 161 44.7
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 6.6e-25 118.6 224 39.7
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 1.1e-24 117.9 224 37.9
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.1e-24 117.9 224 37.9
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 1.1e-24 117.9 216 38.4
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.1e-24 117.9 222 37.4
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.9e-24 117.1 226 39.8
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.9e-24 117.1 228 36.8
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.5e-24 116.7 179 42.5
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 3.3e-24 116.3 184 41.8
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.5e-24 115.5 223 38.1
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 9.5e-24 114.8 227 37.4
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.6e-23 114.0 202 39.6
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 2.1e-23 113.6 186 40.3
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 2.1e-23 113.6 210 37.6
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 2.8e-23 113.2 249 32.9
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 2.8e-23 113.2 217 35.9
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 3.6e-23 112.8 223 39.0
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 6.1e-23 112.1 216 38.9
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.3e-22 110.2 184 39.7
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 3.0e-22 109.8 194 36.6
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 4.0e-22 109.4 205 34.6
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 5.2e-22 109.0 217 35.5
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 6.8e-22 108.6 225 34.2
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 6.8e-22 108.6 216 33.3
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 6.8e-22 108.6 222 35.1
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 8.9e-22 108.2 203 36.0
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 8.9e-22 108.2 193 37.3
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.5e-21 107.5 241 38.2
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.0e-21 107.1 206 37.9
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.0e-21 107.1 206 37.9
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.0e-21 107.1 206 37.9
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 3.4e-21 106.3 217 34.1
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 3.4e-21 106.3 215 36.3
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 4.4e-21 105.9 190 37.4
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 4.4e-21 105.9 224 36.6
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 1.7e-20 104.0 190 38.9
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 1.7e-20 104.0 206 35.0
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 1.7e-20 104.0 197 36.5
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 2.8e-20 103.2 203 35.5
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 2.8e-20 103.2 229 30.1
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 3.7e-20 102.8 203 36.9
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.7e-20 102.8 241 37.3
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 1.1e-19 101.3 227 34.4
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 1.1e-19 101.3 223 37.2
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 1.8e-19 100.5 175 38.3
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 4.1e-19 99.4 249 31.7
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 5.4e-19 99.0 203 33.5
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 7.0e-19 98.6 238 37.4
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 1.2e-18 97.8 218 35.3
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 1.6e-18 97.4 167 37.7
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 2.0e-18 97.1 218 33.5
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 2.0e-18 97.1 173 40.5
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 2.7e-18 96.7 186 38.2
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 5.9e-18 95.5 214 35.0
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 7.8e-18 95.1 191 38.2
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 1.0e-17 94.7 234 35.5
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.3e-17 94.4 186 34.9
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.3e-17 94.4 211 34.1
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 5.0e-17 92.4 200 35.5
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 1.9e-16 90.5 117 43.6
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 9.5e-16 88.2 217 32.7
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.1e-15 87.0 265 29.4
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 5.2e-14 82.4 229 29.3
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.7e-12 77.4 140 40.0
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 3.7e-12 76.3 196 32.1
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 1.9e-11 73.9 205 32.7
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 1.9e-11 73.9 158 32.9
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 4.1e-11 72.8 167 34.7
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 4.1e-11 72.8 157 31.2
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 2.3e-09 67.0 135 34.1
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.3e-09 67.0 185 29.7
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 1.9e-08 63.9 109 39.4
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 1.6e-07 60.8 122 36.1
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.1e-07 60.5 221 28.5
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 8.0e-07 58.5 210 30.0
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 6.8e-06 55.5 206 29.6


User provided reference genes

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