Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026904 Daucus carota HOM05D004629 ORTHO05D023587 3.9e-30 134.0 63 100.0
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 1.6e-20 102.1 51 94.1
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 8.2e-20 99.8 51 90.2
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 1.8e-19 98.6 51 90.2
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 5.3e-19 97.1 51 88.2
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 6.9e-19 96.7 51 88.2
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 6.9e-19 96.7 51 88.2
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 6.9e-19 96.7 51 88.2
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 6.9e-19 96.7 51 86.3
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 9.0e-19 96.3 50 90.0
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 9.0e-19 96.3 51 88.2
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 2.0e-18 95.1 55 80.0
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 2.0e-18 95.1 51 86.3
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 2.6e-18 94.7 51 86.3
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 2.6e-18 94.7 51 86.3
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 2.6e-18 94.7 51 86.3
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 3.4e-18 94.4 51 86.3
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 3.4e-18 94.4 51 84.3
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 3.4e-18 94.4 51 84.3
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 3.4e-18 94.4 51 84.3
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 3.4e-18 94.4 51 84.3
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 3.4e-18 94.4 51 84.3
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 4.5e-18 94.0 51 84.3
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 4.5e-18 94.0 51 84.3
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 4.5e-18 94.0 51 84.3
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 4.5e-18 94.0 51 84.3
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 4.5e-18 94.0 51 84.3
BcaB02g11149 Brassica carinata HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 5.9e-18 93.6 51 84.3
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 7.6e-18 93.2 51 84.3
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 7.6e-18 93.2 51 84.3
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 82.4
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 82.4
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 84.3
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 1.0e-17 92.8 51 82.4
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.3e-17 92.4 53 79.2
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.3e-17 92.4 53 79.2
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 84.3
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 84.3
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 84.3
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 84.3
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 1.3e-17 92.4 51 82.4
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 1.7e-17 92.0 51 82.4
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 2.2e-17 91.7 51 82.4
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 2.9e-17 91.3 51 82.4
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 2.9e-17 91.3 51 82.4
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 3.8e-17 90.9 51 80.4
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 3.8e-17 90.9 55 76.4
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 3.8e-17 90.9 51 80.4
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 3.8e-17 90.9 51 80.4
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 5.0e-17 90.5 51 80.4
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 6.5e-17 90.1 51 80.4
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 6.5e-17 90.1 51 82.4
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 6.5e-17 90.1 51 80.4
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 6.5e-17 90.1 51 80.4
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 8.5e-17 89.7 51 80.4
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 8.5e-17 89.7 50 82.0
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.4e-16 89.0 51 80.4
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.4e-16 89.0 51 80.4
Actinidia39366 Actinidia chinensis HOM05D004629 ORTHO05D006604 1.9e-16 88.6 51 78.4
Sabra01G0008400 Salix brachista HOM05D004629 ORTHO05D023587 2.5e-16 88.2 51 80.4
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 4.2e-16 87.4 50 80.0
Aqoxy5G02400 Aquilegia oxysepala HOM05D004629 ORTHO05D023587 4.2e-16 87.4 50 80.0
Aqoxy5G02405 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 7.2e-16 86.7 50 78.0
Psat1g079640 Pisum sativum HOM05D004629 ORTHO05D023587 1.6e-15 85.5 50 78.0
DCAR_017261 Daucus carota HOM05D004629 ORTHO05D006604 6.1e-15 83.6 45 88.9
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 7.9e-15 83.2 44 88.6
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 1.3e-14 82.4 45 84.4
Nn1g06900 Nelumbo nucifera HOM05D004629 ORTHO05D023587 3.0e-14 81.3 47 78.7
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 8.7e-14 79.7 51 70.6
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 1.5e-13 79.0 50 72.0
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 6.3e-12 73.6 45 71.1
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 2.9e-09 64.7 39 74.4
Psat2g086520 Pisum sativum HOM05D004629 ORTHO05D006604 8.5e-09 63.2 35 82.9


User provided reference genes

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