Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026793 Daucus carota HOM05D004013 ORTHO05D004710 4.1e-223 777.7 381 100.0
DCAR_023584 Daucus carota HOM05D004013 ORTHO05D004710 8.6e-181 637.1 398 79.6
Dinv28066 Davidia involucrata HOM05D004013 ORTHO05D004710 2.7e-158 562.4 400 70.5
Lj6A740G51 Lonicera japonica HOM05D004013 ORTHO05D004710 2.3e-157 559.3 405 69.9
Hma1.2p1_0940F.1_g239620 Hydrangea macrophylla HOM05D004013 ORTHO05D004710 1.5e-153 546.6 400 67.8
CSS0003826 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 9.9e-153 543.9 402 68.4
CSS0048139 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 2.9e-152 542.3 402 68.2
Lj3C865T7 Lonicera japonica HOM05D004013 ORTHO05D004710 4.6e-150 535.0 400 67.8
vmacro09116 Vaccinium macrocarpon HOM05D004013 ORTHO05D004710 1.7e-149 533.1 400 66.8
CiPaw.09G068100 Carya illinoinensis HOM05D004013 ORTHO05D004710 9.6e-148 527.3 400 67.2
HanXRQChr08g0212421 Helianthus annuus HOM05D004013 ORTHO05D004710 1.3e-147 526.9 400 66.0
CiPaw.10G057600 Carya illinoinensis HOM05D004013 ORTHO05D004710 2.8e-147 525.8 400 66.5
ECA232G0201 Erigeron canadensis HOM05D004013 ORTHO05D004710 1.1e-146 523.9 400 65.5
QL05p046231 Quercus lobata HOM05D004013 ORTHO05D004710 1.4e-146 523.5 399 66.7
Cfa000589 Carpinus fangiana HOM05D004013 ORTHO05D004710 5.3e-146 521.5 400 66.2
GSVIVG01003913001 Vitis vinifera HOM05D004013 ORTHO05D004710 6.9e-146 521.2 401 65.6
MD00G1055200 Malus domestica HOM05D004013 ORTHO05D004710 9.0e-146 520.8 400 65.0
Atru.chr3.2025 Acer truncatum HOM05D004013 ORTHO05D004710 5.8e-145 518.1 400 66.2
HanXRQChr12g0363401 Helianthus annuus HOM05D004013 ORTHO05D004710 2.2e-144 516.2 400 64.5
MD07G1000400 Malus domestica HOM05D004013 ORTHO05D004710 3.8e-144 515.4 400 64.8
Prupe.2G000200 Prunus persica HOM05D004013 ORTHO05D004710 6.4e-144 514.6 400 65.0
Lsat_1_v5_gn_8_45601 Lactuca sativa HOM05D004013 ORTHO05D004710 5.4e-143 511.5 400 64.2
Duzib147G1378 Durio zibethinus HOM05D004013 ORTHO05D004710 7.1e-143 511.1 400 65.2
Duzib264G0158 Durio zibethinus HOM05D004013 ORTHO05D004710 2.1e-142 509.6 400 65.2
ECA233G0032 Erigeron canadensis HOM05D004013 ORTHO05D004710 3.0e-141 505.8 400 64.0
TAR365G0341 Trochodendron aralioides HOM05D004013 ORTHO05D004710 5.1e-141 505.0 402 62.9
Manes.01G009000 Manihot esculenta HOM05D004013 ORTHO05D004710 6.7e-141 504.6 400 64.5
arahy.Tifrunner.gnm1.ann1.AL59ZJ Arachis hypogaea HOM05D004013 ORTHO05D004710 8.7e-141 504.2 383 66.1
Potri.007G147100 Populus trichocarpa HOM05D004013 ORTHO05D004710 1.5e-140 503.4 400 64.5
Thecc.01G234100 Theobroma cacao HOM05D004013 ORTHO05D004710 1.9e-140 503.1 400 64.8
Gorai.008G001300 Gossypium raimondii HOM05D004013 ORTHO05D004710 4.3e-140 501.9 400 64.2
Cpa.g.sc9.235 Carica papaya HOM05D004013 ORTHO05D004710 5.6e-140 501.5 400 63.0
Gohir.A12G002200 Gossypium hirsutum HOM05D004013 ORTHO05D004710 7.4e-140 501.1 400 64.5
Gohir.D12G001900 Gossypium hirsutum HOM05D004013 ORTHO05D004710 9.6e-140 500.7 400 64.0
Lj1g0014615 Lotus japonicus HOM05D004013 ORTHO05D004710 1.3e-139 500.4 400 63.5
TAR633G1686 Trochodendron aralioides HOM05D004013 ORTHO05D004710 1.6e-139 500.0 406 63.1
Rhsim09G0091900 Rhododendron simsii HOM05D004013 ORTHO05D004710 2.1e-139 499.6 468 57.5
TWI63G0479 Tripterygium wilfordii HOM05D004013 ORTHO05D004710 4.8e-139 498.4 400 63.0
CANSAT78G0639 Cannabis sativa HOM05D004013 ORTHO05D004710 6.2e-139 498.0 405 62.5
COL.COLO4_06916 Corchorus olitorius HOM05D004013 ORTHO05D004710 1.1e-138 497.3 402 64.2
Hund22667 Selenicereus undatus HOM05D004013 ORTHO05D004710 2.6e-137 492.7 400 62.0
MSTRG.23493 Avicennia marina HOM05D004013 ORTHO05D004710 3.4e-137 492.3 397 63.2
Oeu011024.1 Olea europaea HOM05D004013 ORTHO05D004710 3.4e-137 492.3 399 61.7
AUR62023683 Chenopodium quinoa HOM05D004013 ORTHO05D004710 5.8e-137 491.5 400 63.5
Ca_08048_v3 Cicer arietinum L. HOM05D004013 ORTHO05D004710 5.8e-137 491.5 400 62.2
Ca_08054_v3 Cicer arietinum L. HOM05D004013 ORTHO05D004710 5.8e-137 491.5 400 62.2
VMungo1383G0353 Vigna mungo HOM05D004013 ORTHO05D004710 5.8e-137 491.5 401 62.1
arahy.Tifrunner.gnm1.ann1.LVD0DC Arachis hypogaea HOM05D004013 ORTHO05D004710 7.6e-137 491.1 401 63.3
Glyma.09G244800 Glycine max HOM05D004013 ORTHO05D004710 1.3e-136 490.3 402 62.9
Glyma.18G248400 Glycine max HOM05D004013 ORTHO05D004710 1.3e-136 490.3 403 63.5
Potri.017G000500 Populus trichocarpa HOM05D004013 ORTHO05D004710 1.7e-136 490.0 400 61.5
MELO3C008520.2 Cucumis melo HOM05D004013 ORTHO05D004710 2.2e-136 489.6 400 62.8
Lalb_Chr01g0021691 Lupinus albus HOM05D004013 ORTHO05D004710 2.2e-136 489.6 401 63.3
CsaV3_2G011360 Cucumis sativus L. HOM05D004013 ORTHO05D004710 4.9e-136 488.4 400 62.8
PGSC0003DMG400032144 Solanum tuberosum HOM05D004013 ORTHO05D004710 4.9e-136 488.4 424 59.0
Medtr7g081230 Medicago truncatula HOM05D004013 ORTHO05D004710 6.4e-136 488.0 400 63.0
Nitab4.5_0001568g0070 Nicotiana tabacum HOM05D004013 ORTHO05D004710 8.4e-136 487.6 396 62.6
Phvul.008G048900 Phaseolus vulgaris HOM05D004013 ORTHO05D004710 1.1e-135 487.3 402 61.9
TPR.G29111 Trifolium pratense HOM05D004013 ORTHO05D004710 1.1e-135 487.3 400 62.2
arahy.Tifrunner.gnm1.ann1.ERJ0Z2 Arachis hypogaea HOM05D004013 ORTHO05D004710 1.9e-135 486.5 412 61.7
Ciclev10019906m.g Citrus clementina HOM05D004013 ORTHO05D004710 1.9e-135 486.5 400 61.5
Eucgr.K03157 Eucalyptus grandis HOM05D004013 ORTHO05D004710 1.9e-135 486.5 400 61.2
arahy.Tifrunner.gnm1.ann1.M4STP7 Arachis hypogaea HOM05D004013 ORTHO05D004710 3.2e-135 485.7 400 62.2
Nitab4.5_0005132g0050 Nicotiana tabacum HOM05D004013 ORTHO05D004710 4.2e-135 485.3 396 62.4
AUR62002510 Chenopodium quinoa HOM05D004013 ORTHO05D004710 5.5e-135 485.0 422 60.4
MBI15_g08971_MAGBIO Magnolia biondii HOM05D004013 ORTHO05D004710 5.5e-135 485.0 416 61.1
CAN.G140.48 Capsicum annuum HOM05D004013 ORTHO05D004710 2.1e-134 483.0 424 59.2
Sopen01g002230 Solanum pennellii HOM05D004013 ORTHO05D004710 4.6e-134 481.9 424 58.5
Migut.L00278 Erythranthe guttata HOM05D004013 ORTHO05D004710 1.0e-133 480.7 399 61.2
Solyc01g006230.3 Solanum lycopersicum HOM05D004013 ORTHO05D004710 1.0e-133 480.7 424 58.3
Psat0s3112g0040 Pisum sativum HOM05D004013 ORTHO05D004710 1.8e-133 479.9 400 61.2
EL10Ac3g06192 Beta vulgaris HOM05D004013 ORTHO05D004710 8.7e-133 477.6 426 58.5
Sp4g26220 Schrenkiella parvula HOM05D004013 ORTHO05D004710 2.5e-132 476.1 400 59.0
Sed0016347 Sechium edule HOM05D004013 ORTHO05D004710 2.5e-132 476.1 406 60.1
CDE06G1594 Ceratophyllum demersum HOM05D004013 ORTHO05D004710 3.3e-132 475.7 402 60.2
Aa31LG1G25800 Aethionema arabicum HOM05D004013 ORTHO05D004710 9.6e-132 474.2 400 57.8
PSO732G0206 Papaver somniferum HOM05D004013 ORTHO05D004710 9.6e-132 474.2 404 59.7
CSS0004368 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 2.1e-131 473.0 408 61.3
Migut.L00578 Erythranthe guttata HOM05D004013 ORTHO05D004710 2.1e-131 473.0 397 61.0
Ah.07g203370 Amaranthus hybridus HOM05D004013 ORTHO05D004710 3.7e-131 472.2 400 60.8
TWI15G0551 Tripterygium wilfordii HOM05D004013 ORTHO05D004710 4.8e-131 471.9 400 60.0
Lalb_Chr03g0040611 Lupinus albus HOM05D004013 ORTHO05D004710 1.8e-130 469.9 400 61.0
Nn1g09391 Nelumbo nucifera HOM05D004013 ORTHO05D004710 1.8e-130 469.9 348 66.1
PSO675G0050 Papaver somniferum HOM05D004013 ORTHO05D004710 1.8e-130 469.9 402 59.0
CDE04G0030 Ceratophyllum demersum HOM05D004013 ORTHO05D004710 3.1e-130 469.2 402 60.4
PGR142G2472 Punica granatum HOM05D004013 ORTHO05D004710 3.1e-130 469.2 403 59.8
SGA_v2.0_scaffold3G01797 Striga asiatica HOM05D004013 ORTHO05D004710 4.0e-130 468.8 396 59.1
AL4G43020 Arabidopsis lyrata HOM05D004013 ORTHO05D004710 4.5e-129 465.3 399 57.4
SalBow7G0073 Salvia bowleyana HOM05D004013 ORTHO05D004710 1.7e-128 463.4 444 55.9
ATR0706G248 Amborella trichopoda HOM05D004013 ORTHO05D004710 2.9e-128 462.6 403 58.6
Thhalv10005940m.g Eutrema salsugineum HOM05D004013 ORTHO05D004710 3.8e-128 462.2 400 58.2
SGA_v2.0_scaffold37G14795 Striga asiatica HOM05D004013 ORTHO05D004710 3.8e-128 462.2 396 59.3
Carub.0004s2669 Capsella rubella HOM05D004013 ORTHO05D004710 1.4e-127 460.3 399 56.4
Os04g0682000 Oryza sativa ssp. japonica HOM05D004013 ORTHO05D004710 1.4e-127 460.3 396 59.1
AL5G42130 Arabidopsis lyrata HOM05D004013 ORTHO05D004710 2.5e-127 459.5 406 57.4
AT2G44140 Arabidopsis thaliana HOM05D004013 ORTHO05D004710 2.5e-127 459.5 399 56.6
CARHR170260 Cardamine hirsuta HOM05D004013 ORTHO05D004710 5.5e-127 458.4 404 57.2
vmacro10687 Vaccinium macrocarpon HOM05D004013 ORTHO05D004710 9.3e-127 457.6 471 53.5
CARHR139300 Cardamine hirsuta HOM05D004013 ORTHO05D004710 1.6e-126 456.8 399 56.6
AT3G59950 Arabidopsis thaliana HOM05D004013 ORTHO05D004710 4.6e-126 455.3 405 56.5
Sp5g03230 Schrenkiella parvula HOM05D004013 ORTHO05D004710 4.6e-126 455.3 400 57.2
BcaC07g40539 Brassica carinata HOM05D004013 ORTHO05D004710 1.0e-125 454.1 396 57.6
Carub.0005s2667 Capsella rubella HOM05D004013 ORTHO05D004710 5.1e-125 451.8 356 60.7
C04p32840 Brassica napus HOM05D004013 ORTHO05D004710 9.7e-124 447.6 402 55.7
FvH4_2g06800 Fragaria vesca HOM05D004013 ORTHO05D004710 9.7e-124 447.6 417 56.8
BcaC02g10096 Brassica carinata HOM05D004013 ORTHO05D004710 2.2e-123 446.4 402 56.0
BolC4t24846H Brassica oleracea HOM05D004013 ORTHO05D004710 2.2e-123 446.4 402 56.0
Zm00001eb065800 Zea mays HOM05D004013 ORTHO05D004710 2.2e-123 446.4 399 57.1
Os03g0391000 Oryza sativa ssp. japonica HOM05D004013 ORTHO05D004710 2.8e-123 446.0 397 58.2
FAN20G2928 Fragaria x ananassa HOM05D004013 ORTHO05D004710 3.7e-123 445.7 421 57.0
BcaB02g08204 Brassica carinata HOM05D004013 ORTHO05D004710 4.8e-123 445.3 402 55.0
Ah.13g073110 Amaranthus hybridus HOM05D004013 ORTHO05D004710 6.3e-123 444.9 366 61.5
FAN27G1923 Fragaria x ananassa HOM05D004013 ORTHO05D004710 8.2e-123 444.5 417 56.6
BraA09t40658Z Brassica rapa HOM05D004013 ORTHO05D004710 1.1e-122 444.1 399 56.4
BcaC02g12335 Brassica carinata HOM05D004013 ORTHO05D004710 1.4e-122 443.7 404 55.9
C04p05030 Brassica napus HOM05D004013 ORTHO05D004710 1.4e-122 443.7 404 55.9
BolC4t22136H Brassica oleracea HOM05D004013 ORTHO05D004710 1.4e-122 443.7 404 55.9
BcaB02g08917 Brassica carinata HOM05D004013 ORTHO05D004710 1.8e-122 443.4 404 55.4
A05p04250 Brassica napus HOM05D004013 ORTHO05D004710 4.1e-122 442.2 405 55.8
BraA05t19410Z Brassica rapa HOM05D004013 ORTHO05D004710 5.3e-122 441.8 405 55.8
FAN24G3388 Fragaria x ananassa HOM05D004013 ORTHO05D004710 6.9e-122 441.4 417 56.4
BcaC07g40400 Brassica carinata HOM05D004013 ORTHO05D004710 2.0e-121 439.9 399 56.6
FAN15G0687 Fragaria x ananassa HOM05D004013 ORTHO05D004710 7.7e-121 438.0 381 59.6
BraA04t15923Z Brassica rapa HOM05D004013 ORTHO05D004710 1.7e-120 436.8 402 55.5
unitig_748.g8760 Utricularia gibba HOM05D004013 ORTHO05D004710 2.2e-120 436.4 393 57.0
BolC8t51099H Brassica oleracea HOM05D004013 ORTHO05D004710 3.8e-120 435.6 405 55.6
RcHm_v2.0_Chr6g0259021 Rosa chinensis HOM05D004013 ORTHO05D004710 6.5e-120 434.9 411 57.2
A04p01980 Brassica napus HOM05D004013 ORTHO05D004710 1.4e-119 433.7 403 55.1
Thhalv10001432m.g Eutrema salsugineum HOM05D004013 ORTHO05D004710 4.2e-119 432.2 400 54.2
Dinv18636 Davidia involucrata HOM05D004013 ORTHO05D004710 7.2e-119 431.4 318 68.2
A09p52290 Brassica napus HOM05D004013 ORTHO05D004710 1.6e-118 430.3 424 53.1
Haze_06261 Corylus avellana HOM05D004013 ORTHO05D004710 2.1e-118 429.9 640 41.7
Peaxi162Scf00441g00621 Petunia axillaris HOM05D004013 ORTHO05D004710 2.1e-118 429.9 380 58.4
HPP92_020809 Vanilla planifolia HOM05D004013 ORTHO05D004710 1.0e-117 427.6 402 55.2
Zm00001eb433950 Zea mays HOM05D004013 ORTHO05D004710 1.8e-117 426.8 386 56.5
Oeu034368.2 Olea europaea HOM05D004013 ORTHO05D004710 1.7e-115 420.2 518 45.6
SEGI_37986 Sequoiadendron giganteum HOM05D004013 ORTHO05D004710 6.5e-112 408.3 405 52.8
SHI01175 Sapria himalayana HOM05D004013 ORTHO05D004710 1.4e-111 407.1 409 54.5
Pp3c11_22820 Physcomitrium patens HOM05D004013 ORTHO05D004710 2.5e-111 406.4 403 51.4
Sed0011939 Sechium edule HOM05D004013 ORTHO05D004710 1.1e-106 391.0 284 66.9
Mapoly0153s0038 Marchantia polymorpha HOM05D004013 ORTHO05D004710 2.0e-105 386.7 404 49.3
Pp3c7_280 Physcomitrium patens HOM05D004013 ORTHO05D004710 5.9e-105 385.2 403 47.9
ClCG06G010000 Citrullus lanatus HOM05D004013 ORTHO05D004710 3.2e-103 379.4 282 65.6
THA.LOC104808419 Tarenaya hassleriana HOM05D004013 ORTHO05D004710 1.4e-101 374.0 281 64.1
Sc08g0007990 Simmondsia chinensis HOM05D004013 ORTHO05D004710 1.1e-100 370.9 285 63.9
SMO145G0104 Selaginella moellendorffii HOM05D004013 ORTHO05D004710 6.3e-91 338.6 364 49.7
Actinidia29462 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.1e-82 311.2 221 68.3
Oeu053147.1 Olea europaea HOM05D004013 ORTHO05D004710 7.5e-76 288.5 252 57.9
C08p34940 Brassica napus HOM05D004013 ORTHO05D004710 1.4e-69 267.7 221 59.3
Hma1.2p1_1910F.1_g307280 Hydrangea macrophylla HOM05D004013 ORTHO05D004710 4.6e-65 252.7 185 67.6
Zm00001eb419970 Zea mays HOM05D004013 ORTHO05D004710 3.3e-63 246.5 245 53.9
CBR_g21952 Chara braunii HOM05D004013 ORTHO05D004710 1.9e-58 230.7 308 42.9
Zm00001eb264230 Zea mays HOM05D004013 ORTHO05D004710 5.1e-56 222.6 214 55.6
Actinidia29461 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.8e-53 214.2 160 68.8
Actinidia36638 Actinidia chinensis HOM05D004013 ORTHO05D004710 2.0e-52 210.7 392 39.3
Sabra17G0005400 Salix brachista HOM05D004013 ORTHO05D004710 5.1e-48 196.1 189 54.5
Oeu037862.1 Olea europaea HOM05D004013 ORTHO05D004710 2.9e-43 180.3 285 38.6
PRCOL_00001711 Prasinoderma coloniale HOM05D004013 ORTHO05D004710 2.4e-37 160.6 421 31.6
unitig_32.g11897 Utricularia gibba HOM05D004013 ORTHO05D004710 1.6e-33 147.9 265 38.5
THA.LOC104804900 Tarenaya hassleriana HOM05D004013 ORTHO05D004710 5.1e-32 142.9 154 50.0
MCO13G568 Micromonas commoda HOM05D004013 ORTHO05D004710 2.8e-30 137.1 267 33.0
Peaxi162Scf00271g00518 Petunia axillaris HOM05D004013 ORTHO05D004710 7.6e-28 129.0 118 55.1
Actinidia03474 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.3e-27 128.3 138 50.7
C08p34950 Brassica napus HOM05D004013 ORTHO05D004710 1.3e-24 118.2 95 62.1
ClCG06G009970 Citrullus lanatus HOM05D004013 ORTHO05D004710 3.9e-24 116.7 102 60.8
arahy.Tifrunner.gnm1.ann1.MVA4LE Arachis hypogaea HOM05D004013 ORTHO05D004710 9.0e-21 105.5 125 52.0
Cre12.g510100 Chlamydomonas reinhardtii HOM05D004013 ORTHO05D004710 1.6e-17 94.7 181 33.1
arahy.Tifrunner.gnm1.ann1.AC7664 Arachis hypogaea HOM05D004013 ORTHO05D004710 4.8e-14 83.2 106 49.1
Actinidia03477 Actinidia chinensis HOM05D004013 ORTHO05D004710 4.2e-10 70.1 52 67.3
ATR0807G232 Amborella trichopoda HOM05D004013 ORTHO05D004710 6.1e-09 66.2 45 62.2
Cfa022146 Carpinus fangiana HOM05D004013 ORTHO05D124891 6.7e-08 62.8 361 24.1
ATR0807G053 Amborella trichopoda HOM05D004013 ORTHO05D004710 7.4e-07 59.3 52 51.9


User provided reference genes

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