Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 3.9e-96 354.8 174 100.0
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 5.7e-55 218.0 162 64.8
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 5.3e-53 211.5 111 84.7
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 5.3e-53 211.5 111 84.7
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 6.9e-53 211.1 161 65.2
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 9.1e-53 210.7 113 83.2
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.5e-52 209.9 188 61.2
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.0e-52 209.5 171 62.0
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 3.4e-52 208.8 160 63.8
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 5.9e-52 208.0 170 61.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 5.9e-52 208.0 114 80.7
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 7.7e-52 207.6 168 61.9
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 7.7e-52 207.6 127 74.8
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.0e-51 207.2 114 78.9
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 1.0e-51 207.2 173 60.7
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.0e-51 207.2 170 61.2
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.0e-51 207.2 152 65.1
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.3e-51 206.8 112 79.5
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 1.3e-51 206.8 118 77.1
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.7e-51 206.5 175 60.6
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.7e-51 206.5 181 59.7
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 2.2e-51 206.1 175 62.3
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 2.2e-51 206.1 173 61.8
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 2.9e-51 205.7 115 77.4
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 3.8e-51 205.3 173 61.8
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 8.5e-51 204.1 173 60.1
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 1.1e-50 203.8 168 64.3
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 1.1e-50 203.8 152 65.8
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 1.4e-50 203.4 181 59.7
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 1.4e-50 203.4 163 64.4
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 1.4e-50 203.4 163 64.4
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.4e-50 203.4 158 64.6
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.5e-50 202.6 160 61.9
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 4.2e-50 201.8 176 59.1
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 4.2e-50 201.8 154 62.3
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 4.2e-50 201.8 152 64.5
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 5.5e-50 201.4 162 62.3
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 5.5e-50 201.4 162 62.3
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 5.5e-50 201.4 162 62.3
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 5.5e-50 201.4 176 58.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 7.2e-50 201.1 165 62.4
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.2e-49 200.3 113 77.9
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 1.6e-49 199.9 169 58.6
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.7e-49 199.1 138 71.0
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 3.6e-49 198.7 179 58.7
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 3.6e-49 198.7 117 74.4
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 4.7e-49 198.4 173 59.0
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.7e-49 198.4 164 59.8
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 4.7e-49 198.4 165 63.6
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 6.1e-49 198.0 109 81.7
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 6.1e-49 198.0 166 60.2
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 8.0e-49 197.6 131 67.9
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 8.0e-49 197.6 184 57.1
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 8.0e-49 197.6 169 58.6
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.0e-48 197.2 170 60.0
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.0e-48 197.2 117 73.5
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.8e-48 196.4 114 77.2
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.8e-48 196.4 166 60.2
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.3e-48 196.1 174 60.9
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 2.3e-48 196.1 176 59.7
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 3.0e-48 195.7 114 75.4
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 3.0e-48 195.7 120 74.2
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.9e-48 195.3 131 67.2
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 5.2e-48 194.9 167 59.9
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 6.7e-48 194.5 160 60.6
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 6.7e-48 194.5 139 66.2
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.7e-48 194.5 131 67.2
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 6.7e-48 194.5 165 60.6
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.1e-47 193.7 114 75.4
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.5e-47 193.4 161 60.9
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 1.5e-47 193.4 166 59.0
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 2.0e-47 193.0 138 65.9
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 2.6e-47 192.6 172 57.0
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-47 192.6 113 75.2
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 5.7e-47 191.4 170 61.2
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 5.7e-47 191.4 172 56.4
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 7.4e-47 191.0 114 72.8
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 9.7e-47 190.7 117 73.5
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 9.7e-47 190.7 113 74.3
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.7e-46 189.9 184 53.3
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 2.8e-46 189.1 174 57.5
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.8e-46 188.3 168 61.3
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.8e-45 186.4 181 52.5
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.1e-45 185.3 125 67.2
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 5.3e-45 184.9 111 73.0
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 9.1e-45 184.1 114 72.8
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 1.2e-44 183.7 183 54.6
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.6e-44 182.6 114 67.5
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 1.7e-43 179.9 177 58.2
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.1e-42 177.2 164 56.1
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 2.5e-42 176.0 174 53.4
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 3.2e-42 175.6 102 75.5
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 2.1e-41 172.9 113 69.9
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.4e-40 170.2 194 52.6
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 3.0e-40 169.1 177 54.8
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.7e-38 162.2 125 61.6
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 4.8e-38 161.8 162 54.9
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.6e-36 156.8 130 56.2
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 3.5e-36 155.6 146 54.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 4.5e-36 155.2 171 53.2
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.9e-34 149.8 108 63.0
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.9e-34 149.8 105 66.7
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 9.4e-34 147.5 108 61.1
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.2e-33 147.1 130 55.4
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 3.6e-33 145.6 106 61.3
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.6e-33 145.6 130 53.8
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 8.0e-33 144.4 105 61.9
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 8.0e-33 144.4 103 65.0
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 8.0e-33 144.4 106 62.3
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.0e-32 144.1 108 60.2
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.4e-32 143.7 109 63.3
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.8e-32 143.3 111 58.6
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.8e-32 143.3 103 64.1
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 3.0e-32 142.5 108 61.1
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 5.2e-32 141.7 106 60.4
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 6.8e-32 141.4 158 48.7
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 2.0e-31 139.8 105 57.1
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 3.4e-31 139.0 104 59.6
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.4e-31 139.0 106 60.4
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 5.7e-31 138.3 111 55.9
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 7.5e-31 137.9 108 56.5
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 9.8e-31 137.5 108 56.5
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 1.3e-30 137.1 107 57.0
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 1.7e-30 136.7 106 59.4
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 2.8e-30 136.0 108 59.3
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.8e-30 135.2 106 58.5
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 8.3e-30 134.4 144 47.9
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.1e-29 134.0 103 59.2
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.1e-29 134.0 106 58.5
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.4e-29 133.7 116 52.6
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.8e-29 133.3 107 55.1
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.8e-29 133.3 106 56.6
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 2.4e-29 132.9 98 62.2
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 2.4e-29 132.9 167 44.3
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 3.1e-29 132.5 106 54.7
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 3.1e-29 132.5 149 45.6
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.1e-29 132.1 159 43.4
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 4.1e-29 132.1 105 56.2
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 5.4e-29 131.7 106 55.7
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.4e-29 131.7 106 55.7
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.1e-29 131.0 106 55.7
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.5e-28 129.0 106 54.7
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 2.9e-27 125.9 124 48.4
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.8e-27 125.6 173 41.0
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 8.6e-27 124.4 106 54.7
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 8.6e-27 124.4 93 62.4
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.5e-26 123.6 107 51.4
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 1.5e-26 123.6 206 39.8
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.9e-26 123.2 138 44.9
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 4.2e-26 122.1 60 88.3
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 9.5e-26 120.9 105 52.4
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.1e-25 119.8 61 86.9
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 3.6e-25 119.0 88 61.4
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 4.7e-25 118.6 166 41.0
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 4.7e-25 118.6 156 45.5
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 4.7e-25 118.6 105 51.4
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.8e-24 116.7 101 57.4
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 2.0e-23 113.2 114 50.0
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 2.0e-23 113.2 114 50.0
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.2e-22 109.8 99 59.6
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 8.3e-22 107.8 134 43.3
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 5.4e-21 105.1 59 74.6
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 1.2e-20 104.0 190 32.6
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 3.5e-20 102.4 54 77.8
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 3.8e-19 99.0 108 45.4
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 5.6e-18 95.1 213 29.1
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 9.5e-18 94.4 193 37.8
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 8.9e-16 87.8 63 60.3
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 2.7e-12 76.3 76 48.7
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 1.5e-10 70.5 95 36.8
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 1.5e-10 70.5 103 42.7
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 3.1e-08 62.8 47 57.4
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 1.2e-07 60.8 43 62.8
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 3.4e-07 59.3 47 57.4
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 4.4e-07 58.9 92 39.1
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 1.3e-06 57.4 47 53.2
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 2.9e-06 56.2 47 55.3
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 3.7e-06 55.8 47 53.2
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 8.3e-06 54.7 47 51.1


User provided reference genes

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