Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 2.9e-105 385.2 187 100.0
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.3e-102 375.6 186 96.8
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 9.6e-101 370.2 186 94.6
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 9.6e-101 370.2 186 94.6
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 9.6e-101 370.2 186 94.6
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 1.3e-100 369.8 186 95.2
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 3.7e-100 368.2 186 93.5
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 4.8e-100 367.9 185 94.1
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 6.2e-100 367.5 185 94.1
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 6.2e-100 367.5 186 93.0
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 6.2e-100 367.5 185 94.1
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 6.2e-100 367.5 185 94.1
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 1.1e-99 366.7 185 94.1
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 1.4e-99 366.3 186 93.5
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 94.6
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-99 366.3 185 94.6
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 1.8e-99 365.9 185 93.5
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 1.8e-99 365.9 186 93.0
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 1.8e-99 365.9 186 93.0
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 2.4e-99 365.5 186 92.5
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.4e-99 365.5 186 92.5
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.4e-99 365.5 186 92.5
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 3.1e-99 365.2 185 93.5
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 4.0e-99 364.8 186 93.0
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.0e-99 364.8 186 93.0
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.0e-99 364.8 186 93.0
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.0e-99 364.8 186 93.0
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.0e-99 364.8 186 93.0
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 4.0e-99 364.8 187 92.5
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 4.0e-99 364.8 185 94.1
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 5.3e-99 364.4 186 92.5
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 5.3e-99 364.4 186 92.5
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 5.3e-99 364.4 186 91.9
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 9.0e-99 363.6 184 93.5
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 9.0e-99 363.6 184 93.5
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.2e-98 363.2 186 91.4
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.2e-98 363.2 186 93.0
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.2e-98 363.2 186 93.0
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 1.2e-98 363.2 186 92.5
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 1.2e-98 363.2 185 91.9
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.2e-98 363.2 186 92.5
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.5e-98 362.8 184 92.9
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.5e-98 362.8 184 92.9
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 1.5e-98 362.8 184 94.0
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 1.5e-98 362.8 186 91.4
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 1.5e-98 362.8 185 92.4
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 1.5e-98 362.8 184 93.5
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 1.5e-98 362.8 184 92.4
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 2.0e-98 362.5 186 91.9
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 2.0e-98 362.5 186 92.5
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 3.4e-98 361.7 184 92.4
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 3.4e-98 361.7 186 92.5
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.4e-98 361.7 186 92.5
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 3.4e-98 361.7 186 90.9
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 3.4e-98 361.7 185 92.4
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 4.5e-98 361.3 184 92.9
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 5.8e-98 360.9 186 92.5
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 7.6e-98 360.5 186 90.9
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 7.6e-98 360.5 186 91.4
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 1.0e-97 360.1 184 92.4
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 1.0e-97 360.1 186 91.9
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 1.0e-97 360.1 185 91.4
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 1.0e-97 360.1 186 92.5
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 1.0e-97 360.1 186 90.9
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.3e-97 359.8 184 91.8
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 1.3e-97 359.8 185 91.4
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 1.3e-97 359.8 186 90.9
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 1.7e-97 359.4 186 90.3
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 1.7e-97 359.4 186 90.3
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 2.2e-97 359.0 186 90.9
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 2.2e-97 359.0 186 91.4
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 2.2e-97 359.0 185 91.4
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 3.8e-97 358.2 186 90.9
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.8e-97 358.2 185 90.8
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.8e-97 358.2 185 90.8
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 3.8e-97 358.2 186 90.9
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 4.9e-97 357.8 185 91.9
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.9e-97 357.8 206 85.0
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 4.9e-97 357.8 185 91.4
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.5e-97 357.5 186 89.2
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.5e-97 357.5 186 89.2
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.5e-97 357.5 186 89.2
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 6.5e-97 357.5 186 89.2
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 6.5e-97 357.5 186 90.9
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 6.5e-97 357.5 184 91.8
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 6.5e-97 357.5 186 89.2
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 8.4e-97 357.1 184 91.3
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 8.4e-97 357.1 185 90.8
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 1.1e-96 356.7 186 90.3
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 1.4e-96 356.3 186 90.9
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 1.4e-96 356.3 186 89.2
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.4e-96 356.3 187 90.9
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 1.4e-96 356.3 185 90.3
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 1.9e-96 355.9 186 90.3
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 1.9e-96 355.9 186 90.3
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 1.9e-96 355.9 186 90.3
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 1.9e-96 355.9 186 90.3
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 1.9e-96 355.9 186 89.8
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 2.5e-96 355.5 185 89.7
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 2.5e-96 355.5 185 90.3
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.2e-96 355.1 185 89.7
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 3.2e-96 355.1 186 90.9
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 3.2e-96 355.1 186 90.9
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 4.2e-96 354.8 185 89.7
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 5.5e-96 354.4 186 89.8
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 5.5e-96 354.4 186 90.3
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 7.1e-96 354.0 186 89.8
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 7.1e-96 354.0 186 90.3
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 7.1e-96 354.0 186 90.3
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 9.3e-96 353.6 186 90.3
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 1.2e-95 353.2 186 89.8
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 1.2e-95 353.2 186 89.8
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 1.6e-95 352.8 186 88.7
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 1.6e-95 352.8 186 89.8
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 1.6e-95 352.8 186 89.8
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 2.7e-95 352.1 185 89.2
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 4.6e-95 351.3 186 89.8
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 4.6e-95 351.3 186 89.8
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 4.6e-95 351.3 186 89.8
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 4.6e-95 351.3 186 89.2
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 4.6e-95 351.3 185 88.1
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 7.9e-95 350.5 198 84.8
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 1.8e-94 349.4 183 88.5
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 2.3e-94 349.0 184 90.2
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 3.0e-94 348.6 186 88.7
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 5.1e-94 347.8 184 90.2
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 1.5e-93 346.3 186 88.2
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 1.5e-93 346.3 185 88.1
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 2.5e-93 345.5 186 88.2
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 2.5e-93 345.5 186 88.2
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 4.3e-93 344.7 193 86.0
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 2.1e-92 342.4 181 89.5
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 4.1e-91 338.2 251 69.3
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 1.0e-89 333.6 182 84.1
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 1.0e-89 333.6 182 85.7
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.9e-88 329.3 187 85.6
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 3.2e-88 328.6 182 85.2
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 3.0e-86 322.0 191 81.2
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 9.7e-85 317.0 183 78.1
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 9.7e-85 317.0 161 91.9
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 3.1e-83 312.0 182 81.3
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.2e-81 305.8 185 78.4
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 5.7e-77 291.2 152 87.5
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 1.7e-73 279.6 141 93.6
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 8.5e-73 277.3 143 92.3
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 3.6e-71 271.9 144 86.1
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 4.4e-69 265.0 139 88.5
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 4.1e-67 258.5 130 89.2
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.5e-65 250.8 187 69.5
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.5e-64 250.0 164 76.8
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 3.2e-64 248.8 136 86.0
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.2e-64 248.4 148 82.4
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 6.1e-63 244.6 128 85.2
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 8.0e-63 244.2 185 70.8
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 1.0e-57 227.3 188 53.2
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 2.7e-55 219.2 187 55.6
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 7.0e-51 204.5 166 66.3
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 6.8e-46 188.0 157 65.0
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 5.7e-45 184.9 90 88.9
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.6e-42 176.8 90 86.7
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.5e-42 175.6 103 75.7
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 5.9e-42 174.9 90 84.4
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.9e-41 172.6 87 85.1
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 5.0e-41 171.8 87 85.1
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 8.6e-41 171.0 107 71.0
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.1e-40 170.6 87 85.1
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.9e-40 169.9 100 76.0
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.9e-40 169.9 87 85.1
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 9.8e-37 157.5 87 81.6
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.0e-34 149.8 79 83.5
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.7e-33 146.7 161 50.3
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 6.6e-33 144.8 96 78.1
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 3.3e-32 142.5 139 58.3
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 9.5e-32 141.0 68 85.3
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 1.0e-30 137.5 70 95.7
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.0e-27 124.8 62 82.3
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.0e-27 124.8 62 82.3
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.0e-27 124.8 62 82.3
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.0e-27 124.8 62 82.3
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.0e-27 124.8 62 82.3
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.0e-27 124.8 62 82.3
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 1.2e-15 87.4 44 90.9
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 1.4e-14 84.0 43 95.3
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 6.8e-14 81.6 55 72.7


User provided reference genes

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