Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025112 Daucus carota HOM05D000742 ORTHO05D176450 4.4e-173 611.3 329 100.0
DCAR_030192 Daucus carota HOM05D000742 ORTHO05D177254 4.8e-79 298.9 213 79.3
DCAR_029483 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-45 186.8 115 87.8
DCAR_008239 Daucus carota HOM05D000742 ORTHO05D000924 8.5e-44 181.8 121 82.6
DCAR_014071 Daucus carota HOM05D000742 ORTHO05D178383 3.6e-34 149.8 94 86.2
DCAR_019852 Daucus carota HOM05D000742 ORTHO05D176806 3.0e-20 103.6 70 78.6
Actinidia25989 Actinidia chinensis HOM05D000742 ORTHO05D000924 7.3e-11 72.4 130 43.1
COL.COLO4_16965 Corchorus olitorius HOM05D000742 ORTHO05D000924 3.6e-10 70.1 163 35.0
Duzib084G0106 Durio zibethinus HOM05D000742 ORTHO05D000924 4.7e-10 69.7 164 32.9
Actinidia03353 Actinidia chinensis HOM05D000742 ORTHO05D000924 6.2e-10 69.3 164 36.0
TAR374G1002 Trochodendron aralioides HOM05D000742 ORTHO05D000924 6.2e-10 69.3 164 33.5
SGA_v2.0_scaffold44G16899 Striga asiatica HOM05D000742 ORTHO05D000924 1.4e-09 68.2 151 33.1
BraA03t14158Z Brassica rapa HOM05D000742 ORTHO05D000924 3.1e-09 67.0 165 33.3
Thhalv10025761m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 3.1e-09 67.0 164 34.1
Potri.001G138400 Populus trichocarpa HOM05D000742 ORTHO05D000924 3.1e-09 67.0 162 32.7
Nitab4.5_0001762g0030 Nicotiana tabacum HOM05D000742 ORTHO05D000924 5.2e-09 66.2 163 31.3
Thecc.03G307700 Theobroma cacao HOM05D000742 ORTHO05D000924 6.8e-09 65.9 163 33.1
Aa31LG6G470 Aethionema arabicum HOM05D000742 ORTHO05D000924 8.9e-09 65.5 165 32.1
Ciclev10016191m.g Citrus clementina HOM05D000742 ORTHO05D000924 8.9e-09 65.5 162 33.3
Gohir.A03G000044 Gossypium hirsutum HOM05D000742 ORTHO05D000924 8.9e-09 65.5 163 31.9
Medtr5g029640 Medicago truncatula HOM05D000742 ORTHO05D000924 8.9e-09 65.5 162 34.0
Psat0s2923g0040 Pisum sativum HOM05D000742 ORTHO05D000924 8.9e-09 65.5 162 34.0
Sp7g16390 Schrenkiella parvula HOM05D000742 ORTHO05D000924 8.9e-09 65.5 164 31.1
Thecc.05G215300 Theobroma cacao HOM05D000742 ORTHO05D000924 8.9e-09 65.5 168 32.7
AT4G17720 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 1.2e-08 65.1 164 32.9
Duzib177G0694 Durio zibethinus HOM05D000742 ORTHO05D000924 1.2e-08 65.1 166 31.3
Eucgr.E00244 Eucalyptus grandis HOM05D000742 ORTHO05D000924 1.2e-08 65.1 149 33.6
Lsat_1_v5_gn_6_3440 Lactuca sativa HOM05D000742 ORTHO05D000924 1.2e-08 65.1 133 33.8
Lalb_Chr09g0325561 Lupinus albus HOM05D000742 ORTHO05D000924 1.2e-08 65.1 162 32.7
Atru.chr6.1630 Acer truncatum HOM05D000742 ORTHO05D000924 1.5e-08 64.7 161 31.7
BcaC06g33585 Brassica carinata HOM05D000742 ORTHO05D000924 1.5e-08 64.7 164 33.5
BcaNung04038 Brassica carinata HOM05D000742 ORTHO05D000924 1.5e-08 64.7 164 32.9
A03p50660 Brassica napus HOM05D000742 ORTHO05D000924 1.5e-08 64.7 164 32.9
C07p49050 Brassica napus HOM05D000742 ORTHO05D000924 1.5e-08 64.7 164 33.5
BolC7t45410H Brassica oleracea HOM05D000742 ORTHO05D000924 1.5e-08 64.7 164 33.5
Glyma.09G206900 Glycine max HOM05D000742 ORTHO05D000924 1.5e-08 64.7 163 32.5
Sabra01G0107200 Salix brachista HOM05D000742 ORTHO05D000924 1.5e-08 64.7 162 31.5
AL7G36850 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 2.0e-08 64.3 164 32.9
CARHR224440 Cardamine hirsuta HOM05D000742 ORTHO05D000924 2.0e-08 64.3 164 31.7
Ca_08148_v3 Cicer arietinum L. HOM05D000742 ORTHO05D000924 2.0e-08 64.3 162 34.0
Duzib205G0173 Durio zibethinus HOM05D000742 ORTHO05D000924 2.6e-08 63.9 167 32.3
Nn1g01981 Nelumbo nucifera HOM05D000742 ORTHO05D000924 3.4e-08 63.5 163 31.9
Potri.003G095400 Populus trichocarpa HOM05D000742 ORTHO05D000924 3.4e-08 63.5 164 31.7
Glyma.01G015500 Glycine max HOM05D000742 ORTHO05D000924 4.4e-08 63.2 162 32.1
Sp6g27280 Schrenkiella parvula HOM05D000742 ORTHO05D000924 4.4e-08 63.2 119 37.0
Phvul.011G019600 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 5.8e-08 62.8 145 32.4
PGR042G0913 Punica granatum HOM05D000742 ORTHO05D000924 5.8e-08 62.8 173 31.8
Carub.0007s2364 Capsella rubella HOM05D000742 ORTHO05D000924 7.5e-08 62.4 164 32.3
unitig_92.g28228 Utricularia gibba HOM05D000742 ORTHO05D000924 7.5e-08 62.4 156 32.1
GSVIVG01013098001 Vitis vinifera HOM05D000742 ORTHO05D000924 7.5e-08 62.4 164 32.3
GSVIVG01024381001 Vitis vinifera HOM05D000742 ORTHO05D000924 7.5e-08 62.4 163 31.9
BcaNung00064 Brassica carinata HOM05D000742 ORTHO05D000924 9.9e-08 62.0 164 32.3
Duzib128G1876 Durio zibethinus HOM05D000742 ORTHO05D000924 9.9e-08 62.0 162 31.5
Eucgr.E02851 Eucalyptus grandis HOM05D000742 ORTHO05D000924 9.9e-08 62.0 164 31.7
Gorai.003G184200 Gossypium raimondii HOM05D000742 ORTHO05D000924 9.9e-08 62.0 160 31.2
Manes.09G125200 Manihot esculenta HOM05D000742 ORTHO05D000924 9.9e-08 62.0 163 28.8
Phvul.002G138100 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 9.9e-08 62.0 162 30.9
Sabra03G0064300 Salix brachista HOM05D000742 ORTHO05D000924 9.9e-08 62.0 170 30.6
TPR.G8079 Trifolium pratense HOM05D000742 ORTHO05D000924 9.9e-08 62.0 162 31.5
unitig_52.g17201 Utricularia gibba HOM05D000742 ORTHO05D000924 1.3e-07 61.6 150 31.3
COL.COLO4_15225 Corchorus olitorius HOM05D000742 ORTHO05D000924 1.7e-07 61.2 162 30.9
Dinv28988 Davidia involucrata HOM05D000742 ORTHO05D000924 1.7e-07 61.2 104 39.4
Manes.17G010500 Manihot esculenta HOM05D000742 ORTHO05D000924 1.7e-07 61.2 160 31.9
Zm00001eb379100 Zea mays HOM05D000742 ORTHO05D000924 1.7e-07 61.2 164 31.1
Peaxi162Scf00170g00921 Petunia axillaris HOM05D000742 ORTHO05D000924 2.2e-07 60.8 163 31.9
CSS0025586 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 2.9e-07 60.5 149 33.6
CDE06G2438 Ceratophyllum demersum HOM05D000742 ORTHO05D000924 2.9e-07 60.5 159 29.6
Gorai.003G053100 Gossypium raimondii HOM05D000742 ORTHO05D000924 2.9e-07 60.5 162 30.9
CSS0044634 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 3.7e-07 60.1 164 31.1
Gohir.A02G141000 Gossypium hirsutum HOM05D000742 ORTHO05D000924 3.7e-07 60.1 162 30.9
Gohir.D03G175200 Gossypium hirsutum HOM05D000742 ORTHO05D000924 3.7e-07 60.1 160 30.6
Nitab4.5_0000021g0620 Nicotiana tabacum HOM05D000742 ORTHO05D000924 3.7e-07 60.1 163 30.1
Actinidia38431 Actinidia chinensis HOM05D000742 ORTHO05D000924 4.9e-07 59.7 143 32.2
CSS0034082 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 4.9e-07 59.7 149 33.6
Nn3g19410 Nelumbo nucifera HOM05D000742 ORTHO05D000924 4.9e-07 59.7 104 38.5
Os04g0594400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 4.9e-07 59.7 104 39.4
Zm00001eb268790 Zea mays HOM05D000742 ORTHO05D000924 4.9e-07 59.7 163 31.3
Hma1.2p1_0572F.1_g181190 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 6.4e-07 59.3 131 35.9
Hma1.2p1_3278F.1_g334813 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 6.4e-07 59.3 131 35.9
VMungo1215G1061 Vigna mungo HOM05D000742 ORTHO05D000924 6.4e-07 59.3 165 29.7
BcaC09g51615 Brassica carinata HOM05D000742 ORTHO05D000924 8.3e-07 58.9 163 30.1
A01p09790 Brassica napus HOM05D000742 ORTHO05D000924 8.3e-07 58.9 163 30.1
C01p11420 Brassica napus HOM05D000742 ORTHO05D000924 8.3e-07 58.9 163 30.1
BolC1t01111H Brassica oleracea HOM05D000742 ORTHO05D000924 8.3e-07 58.9 163 30.1
BraA03t10126Z Brassica rapa HOM05D000742 ORTHO05D000924 8.3e-07 58.9 162 29.0
Migut.F00090 Erythranthe guttata HOM05D000742 ORTHO05D000924 8.3e-07 58.9 164 31.7
Oeu028871.1 Olea europaea HOM05D000742 ORTHO05D000924 8.3e-07 58.9 164 31.1
Thhalv10001235m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 1.1e-06 58.5 168 27.4
Lsat_1_v5_gn_3_19600 Lactuca sativa HOM05D000742 ORTHO05D000924 1.1e-06 58.5 164 32.3
Lsat_1_v5_gn_9_47681 Lactuca sativa HOM05D000742 ORTHO05D000924 1.1e-06 58.5 167 29.3
CiPaw.11G097100 Carya illinoinensis HOM05D000742 ORTHO05D000924 1.4e-06 58.2 163 31.3
Lj2g0003405 Lotus japonicus HOM05D000742 ORTHO05D000924 1.4e-06 58.2 162 31.5
MSTRG.13746 Avicennia marina HOM05D000742 ORTHO05D000924 1.9e-06 57.8 164 29.9
Hma1.2p1_0572F.1_g181200 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 1.9e-06 57.8 163 31.3
Os06g0112400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 1.9e-06 57.8 164 30.5
Zm00001eb223750 Zea mays HOM05D000742 ORTHO05D000924 1.9e-06 57.8 126 32.5
AUR62028187 Chenopodium quinoa HOM05D000742 ORTHO05D000924 2.4e-06 57.4 164 31.7
AUR62028191 Chenopodium quinoa HOM05D000742 ORTHO05D000924 2.4e-06 57.4 164 31.7
Cc08_g03430 Coffea canephora HOM05D000742 ORTHO05D000924 2.4e-06 57.4 162 30.9
Peaxi162Scf00516g00664 Petunia axillaris HOM05D000742 ORTHO05D000924 2.4e-06 57.4 149 30.2
Sed0027016 Sechium edule HOM05D000742 ORTHO05D000924 2.4e-06 57.4 148 29.7
VMungo0251G0220 Vigna mungo HOM05D000742 ORTHO05D000924 2.4e-06 57.4 162 31.5
Zm00001eb223760 Zea mays HOM05D000742 ORTHO05D000924 2.4e-06 57.4 126 32.5
A03p08010 Brassica napus HOM05D000742 ORTHO05D000924 3.2e-06 57.0 148 29.7
BraA01t00923Z Brassica rapa HOM05D000742 ORTHO05D000924 3.2e-06 57.0 165 31.5
AUR62002074 Chenopodium quinoa HOM05D000742 ORTHO05D000924 3.2e-06 57.0 164 31.7
ECA246G1529 Erigeron canadensis HOM05D000742 ORTHO05D000924 3.2e-06 57.0 164 32.9
Lalb_Chr01g0000891 Lupinus albus HOM05D000742 ORTHO05D000924 3.2e-06 57.0 153 29.4
Sc19g0000120 Simmondsia chinensis HOM05D000742 ORTHO05D000924 3.2e-06 57.0 163 30.1
unitig_699.g19790 Utricularia gibba HOM05D000742 ORTHO05D000924 3.2e-06 57.0 148 28.4
Zm00001eb390160 Zea mays HOM05D000742 ORTHO05D000924 3.2e-06 57.0 126 31.7
AT5G16840 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 4.1e-06 56.6 158 29.7
Gohir.A13G087200 Gossypium hirsutum HOM05D000742 ORTHO05D000924 4.1e-06 56.6 160 30.0
Gohir.D13G092800 Gossypium hirsutum HOM05D000742 ORTHO05D000924 4.1e-06 56.6 160 30.0
Gorai.010G139900 Gossypium raimondii HOM05D000742 ORTHO05D000924 4.1e-06 56.6 160 30.0
Lsat_1_v5_gn_3_68461 Lactuca sativa HOM05D000742 ORTHO05D000924 4.1e-06 56.6 167 28.7
Lsat_1_v5_gn_4_36960 Lactuca sativa HOM05D000742 ORTHO05D000924 4.1e-06 56.6 167 28.7
Lsat_1_v5_gn_5_106901 Lactuca sativa HOM05D000742 ORTHO05D000924 4.1e-06 56.6 167 28.7
Lsat_1_v5_gn_7_39100 Lactuca sativa HOM05D000742 ORTHO05D000924 4.1e-06 56.6 167 28.7
Lj5g0000224 Lotus japonicus HOM05D000742 ORTHO05D000924 4.1e-06 56.6 169 29.6
QL12p001218 Quercus lobata HOM05D000742 ORTHO05D000924 4.1e-06 56.6 162 30.9
EL10Ac3g05064 Beta vulgaris HOM05D000742 ORTHO05D000924 5.4e-06 56.2 163 29.4
DCAR_024957 Daucus carota HOM05D000742 ORTHO05D000924 5.4e-06 56.2 166 32.5
Prupe.5G029900 Prunus persica HOM05D000742 ORTHO05D000924 5.4e-06 56.2 162 31.5
Zm00001eb055110 Zea mays HOM05D000742 ORTHO05D000924 5.4e-06 56.2 160 31.9
Zm00001eb430040 Zea mays HOM05D000742 ORTHO05D000924 5.4e-06 56.2 104 37.5
Ciclev10021732m.g Citrus clementina HOM05D000742 ORTHO05D000924 7.1e-06 55.8 164 29.3
Duzib251G0005 Durio zibethinus HOM05D000742 ORTHO05D000924 7.1e-06 55.8 165 31.5
Migut.E00777 Erythranthe guttata HOM05D000742 ORTHO05D000924 7.1e-06 55.8 149 30.9
Lj1C1033T24 Lonicera japonica HOM05D000742 ORTHO05D000924 7.1e-06 55.8 166 29.5
Sc01g0007270 Simmondsia chinensis HOM05D000742 ORTHO05D000924 7.1e-06 55.8 149 32.2
Zm00001eb072190 Zea mays HOM05D000742 ORTHO05D000924 7.1e-06 55.8 103 37.9
Aa31sc182G20 Aethionema arabicum HOM05D000742 ORTHO05D000924 9.2e-06 55.5 159 27.0
arahy.Tifrunner.gnm1.ann1.BGND9H Arachis hypogaea HOM05D000742 ORTHO05D000924 9.2e-06 55.5 162 30.2
arahy.Tifrunner.gnm1.ann1.YQJ5CI Arachis hypogaea HOM05D000742 ORTHO05D000924 9.2e-06 55.5 162 30.2
Carub.0006s1506 Capsella rubella HOM05D000742 ORTHO05D000924 9.2e-06 55.5 161 29.2
Haze_08175 Corylus avellana HOM05D000742 ORTHO05D000924 9.2e-06 55.5 162 29.0
Dinv01892 Davidia involucrata HOM05D000742 ORTHO05D000924 9.2e-06 55.5 105 33.3
ECA233G3221 Erigeron canadensis HOM05D000742 ORTHO05D000924 9.2e-06 55.5 162 31.5
Eucgr.K00081 Eucalyptus grandis HOM05D000742 ORTHO05D000924 9.2e-06 55.5 165 31.5
Prupe.2G327200 Prunus persica HOM05D000742 ORTHO05D000924 9.2e-06 55.5 163 31.9


User provided reference genes

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