Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 4.3e-236 820.8 390 100.0
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 2.5e-175 619.0 357 80.4
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 2.5e-175 619.0 358 80.2
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 1.2e-174 616.7 357 79.3
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 1.2e-174 616.7 349 79.1
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 4.0e-173 611.7 350 80.6
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 1.2e-172 610.1 358 79.6
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 1.5e-172 609.8 358 79.9
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 1.5e-172 609.8 358 78.8
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 2.0e-172 609.4 356 79.2
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 2.6e-172 609.0 357 77.6
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 9.7e-172 607.1 357 77.9
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 2.2e-171 605.9 349 79.1
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 4.8e-171 604.7 349 79.4
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 6.3e-171 604.4 349 77.4
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 8.3e-171 604.0 349 77.4
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 1.4e-170 603.2 357 77.9
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 1.8e-170 602.8 349 77.9
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 3.1e-170 602.1 358 77.7
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 4.1e-170 601.7 350 80.0
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 9.1e-170 600.5 358 77.4
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 1.2e-169 600.1 356 77.2
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 1.2e-169 600.1 349 79.1
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 2.0e-169 599.4 357 77.6
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 2.7e-169 599.0 357 76.5
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 4.5e-169 598.2 357 77.3
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 5.9e-169 597.8 350 78.0
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 1.3e-168 596.7 358 76.0
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 1.7e-168 596.3 357 76.2
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 2.9e-168 595.5 357 75.6
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 6.5e-168 594.3 357 76.5
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 1.5e-167 593.2 357 76.5
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 1.5e-167 593.2 349 77.7
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 1.5e-167 593.2 358 75.4
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 1.9e-167 592.8 357 75.4
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 3.2e-167 592.0 358 75.4
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 3.2e-167 592.0 357 76.2
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 4.2e-167 591.7 352 77.6
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 4.2e-167 591.7 358 76.8
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 4.2e-167 591.7 349 76.2
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 5.5e-167 591.3 357 77.3
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 9.4e-167 590.5 358 75.4
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 3.6e-166 588.6 388 72.2
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 3.6e-166 588.6 358 76.0
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 1.0e-165 587.0 351 76.9
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 1.0e-165 587.0 357 75.6
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.0e-165 587.0 349 75.4
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 1.4e-165 586.6 368 74.2
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 2.3e-165 585.9 357 75.1
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 5.2e-165 584.7 349 75.9
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 1.2e-164 583.6 357 73.9
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 2.0e-164 582.8 357 74.2
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 2.0e-164 582.8 349 76.8
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 2.0e-164 582.8 358 74.6
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 3.4e-164 582.0 357 72.8
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 5.7e-164 581.3 357 74.2
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 7.5e-164 580.9 357 73.7
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.3e-163 580.1 358 73.2
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 6.3e-163 577.8 369 72.6
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 1.1e-162 577.0 369 74.0
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 4.1e-162 575.1 357 74.5
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.2e-161 573.5 358 72.3
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 2.0e-161 572.8 373 72.9
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 2.7e-161 572.4 373 72.1
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 1.0e-160 570.5 350 74.9
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 1.0e-160 570.5 350 73.1
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 2.9e-160 568.9 373 72.4
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 8.6e-160 567.4 361 73.7
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 8.6e-160 567.4 370 71.9
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 2.5e-159 565.8 373 71.6
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 5.5e-159 564.7 361 73.4
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 7.2e-159 564.3 358 71.5
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 9.5e-159 563.9 361 72.9
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 9.5e-159 563.9 361 73.7
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 1.6e-158 563.1 367 72.5
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 3.6e-158 562.0 349 72.8
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 1.0e-157 560.5 360 74.2
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 1.8e-157 559.7 353 71.7
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 2.3e-157 559.3 361 72.3
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 4.0e-157 558.5 361 74.5
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 2.0e-156 556.2 362 71.8
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 2.6e-156 555.8 358 69.8
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 1.3e-155 553.5 361 71.5
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 6.3e-155 551.2 363 71.3
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 2.4e-154 549.3 363 71.1
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 2.4e-154 549.3 363 71.1
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 7.0e-154 547.7 363 71.1
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 4.6e-153 545.0 337 74.2
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 4.6e-153 545.0 348 71.3
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 1.0e-152 543.9 353 71.1
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 1.0e-152 543.9 349 68.5
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 5.0e-152 541.6 370 70.5
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 5.6e-151 538.1 339 70.8
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 1.2e-150 537.0 349 69.9
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 2.0e-148 529.6 359 71.3
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 2.6e-148 529.3 370 65.1
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 3.7e-147 525.4 365 65.8
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 1.9e-143 513.1 358 65.9
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 9.5e-143 510.8 350 66.6
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 1.2e-140 503.8 304 76.3
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 2.9e-139 499.2 298 78.2
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 1.0e-136 490.7 369 66.7
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 6.2e-126 454.9 267 80.1
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 4.4e-124 448.7 260 79.6
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 7.6e-124 448.0 268 76.9
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 1.0e-112 411.0 369 52.8
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 3.1e-109 399.4 389 51.9
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 3.1e-109 399.4 377 51.7
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 4.9e-107 392.1 388 49.7
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 4.3e-103 379.0 318 59.7
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 6.5e-99 365.2 219 80.8
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 3.0e-96 356.3 211 80.6
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 2.8e-94 349.7 391 45.0
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 5.1e-88 328.9 179 89.4
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 6.7e-88 328.6 243 62.6
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 2.0e-76 290.4 185 66.5
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 6.3e-70 268.9 131 92.4
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 1.0e-67 261.5 161 72.0
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 1.5e-55 221.1 161 64.0
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 7.2e-50 202.2 128 75.8
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 6.3e-46 189.1 109 80.7
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 7.0e-45 185.7 142 60.6
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 7.3e-42 175.6 118 70.3
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 5.8e-31 139.4 428 28.7
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 4.3e-26 123.2 86 67.4
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 2.8e-25 120.6 347 28.8
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 1.2e-20 105.1 347 25.6
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 2.1e-17 94.4 269 29.7
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 4.9e-14 83.2 54 75.9
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 2.1e-12 77.8 80 56.2
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 6.6e-11 72.8 177 31.1
Cre10.g462600 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 3.3e-10 70.5 91 40.7
C01p29500 Brassica napus HOM05D005787 ORTHO05D042539 1.1e-08 65.5 61 52.5
BolC1t02892H Brassica oleracea HOM05D005787 ORTHO05D042539 1.1e-08 65.5 61 52.5
QL05p074297 Quercus lobata HOM05D000001 ORTHO05D007011 8.4e-06 55.8 58 44.8


User provided reference genes

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