Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 5.3e-69 264.2 133 100.0
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.6e-44 182.2 102 89.2
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 4.5e-44 181.4 104 87.5
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 5.9e-44 181.0 109 82.6
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 5.9e-44 181.0 102 87.3
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 7.7e-44 180.6 104 86.5
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 7.7e-44 180.6 102 88.2
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 7.7e-44 180.6 106 84.9
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 1.0e-43 180.3 104 86.5
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 1.7e-43 179.5 104 84.6
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 2.2e-43 179.1 101 88.1
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 2.2e-43 179.1 101 89.1
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 2.2e-43 179.1 102 87.3
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 2.2e-43 179.1 101 89.1
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 2.2e-43 179.1 93 93.5
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.2e-43 179.1 102 87.3
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 2.2e-43 179.1 92 95.7
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 2.9e-43 178.7 104 85.6
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 2.9e-43 178.7 103 86.4
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 3.8e-43 178.3 102 86.3
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 3.8e-43 178.3 103 86.4
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 3.8e-43 178.3 102 86.3
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 5.0e-43 177.9 102 86.3
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 5.0e-43 177.9 102 86.3
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 5.0e-43 177.9 102 86.3
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 5.0e-43 177.9 103 86.4
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 5.0e-43 177.9 103 86.4
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 5.0e-43 177.9 101 88.1
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 6.5e-43 177.6 102 86.3
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 6.5e-43 177.6 102 86.3
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 6.5e-43 177.6 102 86.3
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 8.5e-43 177.2 101 87.1
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 8.5e-43 177.2 101 87.1
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 8.5e-43 177.2 102 86.3
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 8.5e-43 177.2 101 87.1
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 8.5e-43 177.2 101 87.1
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 1.1e-42 176.8 93 91.4
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 1.4e-42 176.4 102 86.3
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 1.4e-42 176.4 102 87.3
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 1.4e-42 176.4 102 85.3
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 1.4e-42 176.4 92 92.4
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 1.9e-42 176.0 112 78.6
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 2.5e-42 175.6 102 83.3
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 2.5e-42 175.6 105 81.9
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 2.5e-42 175.6 102 85.3
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 3.2e-42 175.3 102 86.3
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 3.2e-42 175.3 101 87.1
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 3.2e-42 175.3 95 88.4
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 3.2e-42 175.3 103 84.5
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 3.2e-42 175.3 101 84.2
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 3.2e-42 175.3 93 91.4
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.2e-42 174.9 95 88.4
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 4.2e-42 174.9 101 86.1
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 4.2e-42 174.9 101 86.1
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 5.5e-42 174.5 102 84.3
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 5.5e-42 174.5 93 89.2
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 7.2e-42 174.1 110 79.1
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 7.2e-42 174.1 102 83.3
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 7.2e-42 174.1 102 84.3
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 7.2e-42 174.1 92 90.2
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 1.2e-41 173.3 93 88.2
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.2e-41 173.3 93 90.3
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 1.2e-41 173.3 101 84.2
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 1.6e-41 172.9 108 79.6
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.6e-41 172.9 93 88.2
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 2.1e-41 172.6 110 78.2
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 2.1e-41 172.6 102 84.3
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 2.7e-41 172.2 101 84.2
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 2.7e-41 172.2 93 88.2
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 2.7e-41 172.2 94 85.1
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 3.6e-41 171.8 104 81.7
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 4.7e-41 171.4 104 79.8
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 4.7e-41 171.4 101 83.2
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 6.1e-41 171.0 92 88.0
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 6.1e-41 171.0 93 88.2
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 8.0e-41 170.6 113 73.5
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 1.0e-40 170.2 105 80.0
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 1.0e-40 170.2 97 83.5
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 1.0e-40 170.2 97 83.5
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 1.0e-40 170.2 97 83.5
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 1.0e-40 170.2 93 84.9
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 1.0e-40 170.2 93 87.1
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.0e-40 170.2 93 88.2
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.0e-40 170.2 93 87.1
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 1.0e-40 170.2 93 84.9
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 1.4e-40 169.9 102 80.4
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 1.4e-40 169.9 93 84.9
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 1.4e-40 169.9 93 87.1
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 1.4e-40 169.9 93 87.1
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 1.4e-40 169.9 93 84.9
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 1.4e-40 169.9 102 81.4
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.8e-40 169.5 101 82.2
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 2.3e-40 169.1 93 86.0
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 2.3e-40 169.1 93 86.0
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 2.3e-40 169.1 93 86.0
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 2.3e-40 169.1 93 87.1
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 2.3e-40 169.1 93 88.2
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 3.9e-40 168.3 101 81.2
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 3.9e-40 168.3 101 81.2
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 3.9e-40 168.3 104 81.7
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 3.9e-40 168.3 101 81.2
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 3.9e-40 168.3 93 86.0
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 5.2e-40 167.9 93 84.9
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 8.8e-40 167.2 101 80.2
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 1.1e-39 166.8 92 83.7
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 2.6e-39 165.6 93 84.9
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 2.6e-39 165.6 93 81.7
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 2.6e-39 165.6 93 81.7
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 2.6e-39 165.6 93 86.0
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 2.6e-39 165.6 93 81.7
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 3.3e-39 165.2 93 81.7
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 3.3e-39 165.2 97 84.5
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 3.3e-39 165.2 102 79.4
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 4.4e-39 164.9 93 83.9
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 4.4e-39 164.9 92 85.9
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 5.7e-39 164.5 88 89.8
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 5.7e-39 164.5 93 81.7
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 5.7e-39 164.5 93 84.9
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 9.7e-39 163.7 88 88.6
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 9.7e-39 163.7 88 88.6
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 2.2e-38 162.5 93 84.9
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 2.2e-38 162.5 93 83.9
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 3.7e-38 161.8 92 81.5
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 6.3e-38 161.0 86 89.5
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 1.1e-37 160.2 93 80.6
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 1.1e-37 160.2 106 77.4
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 1.1e-37 160.2 92 81.5
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 4.1e-37 158.3 88 85.2
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 9.1e-37 157.1 102 78.4
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.6e-36 155.6 94 80.9
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 2.6e-36 155.6 102 71.6
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 4.5e-36 154.8 93 78.5
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 4.5e-36 154.8 93 79.6
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 5.9e-36 154.5 102 70.6
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 7.7e-36 154.1 147 59.9
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 1.0e-35 153.7 119 67.2
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.3e-35 153.3 111 71.2
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.9e-35 152.1 95 78.9
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 3.8e-35 151.8 93 77.4
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 1.5e-34 149.8 103 68.0
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 1.9e-34 149.4 88 78.4
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 1.9e-34 149.4 105 71.4
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 9.4e-34 147.1 115 65.2
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 2.1e-33 146.0 103 70.9
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 4.7e-33 144.8 78 85.9
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 1.2e-31 140.2 97 71.1
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 1.2e-31 140.2 93 69.9
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 4.4e-31 138.3 81 79.0
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 9.7e-31 137.1 85 81.2
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 7.7e-28 127.5 230 39.1
BraA03t12539Z Brassica rapa HOM05D003677 ORTHO05D004231 2.9e-27 125.6 96 63.5
BcaC01g03318 Brassica carinata HOM05D003677 ORTHO05D004231 8.5e-27 124.0 70 77.1
A03p33640 Brassica napus HOM05D003677 ORTHO05D004231 1.1e-26 123.6 80 73.8
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 3.0e-24 115.5 72 84.7
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.2e-23 113.6 81 71.6
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 4.4e-23 111.7 93 61.3
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 4.4e-23 111.7 61 91.8
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 4.4e-23 111.7 61 91.8
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 4.4e-23 111.7 68 86.8
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 9.8e-23 110.5 79 74.7
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 1.4e-21 106.7 68 82.4
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 4.1e-21 105.1 70 75.7
Cc00_g16450 Coffea canephora HOM05D003677 ORTHO05D004231 4.1e-21 105.1 55 85.5
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 1.3e-19 100.1 61 85.2
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea HOM05D003677 ORTHO05D004231 5.0e-19 98.2 60 70.0
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 5.0e-19 98.2 64 84.4
Nitab4.5_0002478g0040 Nicotiana tabacum HOM05D003677 ORTHO05D004231 8.0e-17 90.9 73 63.0
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 2.0e-15 86.3 70 61.4
Haze_26142 Corylus avellana HOM05D003677 ORTHO05D004231 1.3e-14 83.6 70 54.3
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 3.7e-14 82.0 78 55.1
Cre02.g088800 Chlamydomonas reinhardtii HOM05D003677 ORTHO05D004231 4.5e-12 75.1 51 58.8
MCO06G051 Micromonas commoda HOM05D003677 ORTHO05D004231 1.0e-11 73.9 55 56.4
CSS0031912 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 3.9e-11 72.0 34 91.2
CSS0033866 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 3.9e-11 72.0 34 91.2
C03p53720 Brassica napus HOM05D003677 ORTHO05D004231 2.1e-09 66.2 33 81.8
CARHR219880 Cardamine hirsuta HOM05D003677 ORTHO05D004231 8.0e-09 64.3 56 50.0
Cfa024934 Carpinus fangiana HOM05D006964 ORTHO05D008861 6.4e-06 54.7 110 33.6
PRCOL_00001552 Prasinoderma coloniale HOM05D003677 ORTHO05D004231 8.3e-06 54.3 37 56.8


User provided reference genes

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