Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 7.6e-291 1003.0 485 100.0
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.1e-180 637.1 473 61.7
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 9.3e-180 634.0 472 61.4
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 4.9e-173 611.7 472 59.7
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 2.4e-172 609.4 477 60.4
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 3.2e-172 609.0 480 57.3
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 5.4e-172 608.2 471 60.7
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 9.3e-172 607.4 475 61.7
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 3.3e-169 599.0 487 58.7
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 2.1e-168 596.3 469 60.1
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 6.9e-167 591.3 464 59.5
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 2.0e-166 589.7 477 59.5
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.4e-166 589.0 455 59.8
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 3.4e-166 589.0 474 58.2
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.3e-165 587.0 477 59.3
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 3.8e-165 585.5 471 59.2
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.1e-164 583.9 480 57.3
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 5.5e-164 581.6 474 58.4
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 9.3e-164 580.9 501 55.1
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 6.0e-163 578.2 474 56.8
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.8e-160 569.3 490 57.8
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 6.2e-160 568.2 460 59.1
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 1.8e-159 566.6 478 57.1
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 3.1e-159 565.8 474 56.3
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 4.0e-159 565.5 474 57.2
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 1.2e-158 563.9 487 55.6
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 2.0e-158 563.1 479 57.6
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 2.6e-158 562.8 481 57.0
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 5.8e-158 561.6 473 57.9
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 7.6e-158 561.2 476 57.8
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 1.7e-157 560.1 478 55.9
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 2.2e-157 559.7 473 57.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 3.2e-156 555.8 473 56.2
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 1.6e-155 553.5 373 69.7
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.6e-155 553.5 473 55.8
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 2.5e-153 546.2 478 54.4
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 3.7e-152 542.3 478 54.8
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 4.1e-151 538.9 483 52.0
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 5.5e-148 528.5 481 53.6
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 4.6e-147 525.4 479 53.9
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 4.6e-147 525.4 481 54.9
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.3e-146 523.9 392 62.0
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.0e-146 522.7 459 55.6
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 4.3e-145 518.8 514 51.4
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 2.0e-142 510.0 466 52.8
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 6.5e-141 505.0 477 53.0
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.1e-140 504.2 484 50.6
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.9e-140 503.4 480 53.3
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 2.7e-139 499.6 529 46.5
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 3.6e-139 499.2 533 47.7
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.1e-137 494.2 386 62.7
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 7.4e-137 491.5 523 49.5
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.1e-135 487.6 489 51.1
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.2e-134 484.2 478 48.5
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.5e-134 483.8 483 51.3
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 4.5e-134 482.3 580 44.5
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 5.0e-133 478.8 480 49.8
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.4e-132 477.2 478 52.1
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.2e-132 476.1 478 47.9
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 5.5e-132 475.3 384 59.9
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 1.1e-129 467.6 477 47.6
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 1.3e-128 464.2 479 49.1
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 2.8e-128 463.0 481 49.3
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.1e-127 461.1 514 47.5
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.8e-127 460.3 479 47.8
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 7.0e-127 458.4 472 47.9
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 9.1e-127 458.0 499 48.7
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 1.6e-126 457.2 488 47.7
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.6e-126 457.2 477 48.6
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 2.6e-126 456.4 477 48.2
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 3.5e-126 456.1 474 47.7
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 7.7e-126 454.9 481 48.0
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 5.0e-125 452.2 435 53.1
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 6.5e-125 451.8 479 45.7
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.1e-124 451.1 488 49.4
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 4.0e-122 442.6 528 44.9
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.2e-121 441.0 521 45.5
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.3e-120 437.6 483 47.4
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 9.1e-119 431.4 460 51.1
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 7.7e-118 428.3 371 55.5
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.0e-117 425.6 474 48.5
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.1e-116 424.5 486 44.2
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 5.5e-116 422.2 465 46.5
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 4.7e-115 419.1 329 57.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 6.3e-112 408.7 325 59.7
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 2.3e-109 400.2 316 62.0
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 3.4e-105 386.3 479 44.1
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 5.7e-105 385.6 480 41.9
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 3.5e-102 376.3 483 41.4
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.3e-101 373.6 289 59.9
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.9e-101 373.2 262 66.8
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 1.2e-99 367.9 289 60.6
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.5e-92 344.4 485 37.5
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 3.3e-92 343.2 276 58.3
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.8e-90 337.4 303 56.4
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 9.5e-84 315.1 290 51.7
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 2.3e-77 293.9 330 46.4
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.2e-75 288.1 189 69.3
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 1.8e-74 284.3 525 33.7
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 3.2e-71 273.5 207 60.4
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.7e-62 243.8 188 61.7
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 6.6e-61 239.2 157 66.9
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 4.0e-58 229.9 186 58.1
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 5.1e-53 213.0 220 49.5
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 4.3e-52 209.9 486 30.9
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 4.0e-50 203.4 162 61.1
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 5.3e-50 203.0 168 55.4
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-38 164.5 346 31.5
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 1.3e-35 155.2 192 44.3
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.2e-32 144.4 130 51.5
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 5.3e-26 123.2 131 47.3
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.4e-23 115.2 89 59.6
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.8e-21 108.2 77 59.7
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 1.5e-17 95.1 91 49.5
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 2.1e-14 84.7 53 69.8
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 1.0e-13 82.4 293 24.2
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 2.3e-13 81.3 158 34.2
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 6.5e-08 63.2 47 57.4
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 1.5e-07 62.0 53 50.9
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 5.5e-07 60.1 63 42.9


User provided reference genes

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