Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.1e-190 669.8 355 100.0
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 4.7e-96 355.5 436 52.8
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 5.2e-63 245.7 443 42.4
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 9.8e-62 241.5 430 41.2
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 1.3e-61 241.1 443 41.3
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 2.8e-61 240.0 437 40.0
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 6.3e-61 238.8 431 39.4
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 1.4e-60 237.7 438 39.7
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.6e-59 234.2 434 40.3
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 2.0e-59 233.8 445 40.0
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 4.5e-59 232.6 442 40.7
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 4.5e-59 232.6 439 40.5
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 5.9e-59 232.3 442 40.5
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 5.9e-59 232.3 439 40.8
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 1.7e-58 230.7 441 38.8
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 2.9e-58 229.9 443 39.5
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 1.5e-57 227.6 437 40.3
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.9e-57 227.3 453 39.1
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 6.1e-56 222.2 498 35.9
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.8e-55 220.7 445 40.4
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 5.2e-55 219.2 441 40.4
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 6.8e-55 218.8 436 38.1
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 8.9e-55 218.4 446 39.9
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 8.9e-55 218.4 436 39.2
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 1.5e-54 217.6 499 35.7
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 3.4e-54 216.5 466 37.1
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 2.9e-53 213.4 453 37.7
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 3.7e-53 213.0 498 35.3
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 4.9e-53 212.6 453 39.3
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 6.4e-53 212.2 504 34.9
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 6.4e-53 212.2 436 38.1
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 6.4e-53 212.2 434 38.0
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 8.3e-53 211.8 434 37.6
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 1.1e-52 211.5 441 39.9
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 1.4e-52 211.1 441 38.1
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.9e-52 210.7 499 34.7
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 2.4e-52 210.3 445 38.2
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 7.0e-52 208.8 441 37.6
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 9.2e-52 208.4 435 37.0
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.2e-51 208.0 434 37.8
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 2.0e-51 207.2 512 34.0
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 2.7e-51 206.8 436 36.7
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 4.6e-51 206.1 436 36.5
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 6.0e-51 205.7 436 36.2
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 6.0e-51 205.7 452 36.9
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 1.7e-50 204.1 472 36.0
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 2.3e-50 203.8 438 37.7
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 3.0e-50 203.4 440 36.6
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 3.0e-50 203.4 498 34.7
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 5.0e-50 202.6 437 37.5
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 8.6e-50 201.8 434 37.1
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 1.1e-49 201.4 447 37.8
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 1.1e-49 201.4 437 38.7
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 2.5e-49 200.3 445 36.9
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 2.5e-49 200.3 498 34.1
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 2.1e-48 197.2 440 36.6
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 3.6e-48 196.4 442 36.9
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 3.6e-48 196.4 447 36.5
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 4.7e-48 196.1 439 36.4
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 4.7e-48 196.1 486 34.2
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 6.2e-48 195.7 448 35.7
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 1.1e-47 194.9 432 38.2
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 3.1e-47 193.4 365 42.5
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 4.0e-47 193.0 449 36.1
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 5.2e-47 192.6 447 37.6
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 3.4e-46 189.9 347 41.5
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 9.8e-46 188.3 435 35.2
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.3e-45 188.0 444 39.0
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.3e-45 188.0 431 36.7
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 1.3e-45 188.0 475 33.7
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 1.7e-45 187.6 434 37.8
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 2.9e-45 186.8 432 37.3
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 6.4e-45 185.7 436 35.3
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 1.1e-44 184.9 452 34.3
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.9e-44 184.1 431 36.7
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 1.9e-44 184.1 453 34.9
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 3.2e-44 183.3 418 35.9
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 5.4e-44 182.6 443 38.1
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 1.6e-43 181.0 435 35.6
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 2.7e-43 180.3 431 35.5
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 2.7e-43 180.3 383 38.9
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 6.0e-43 179.1 431 34.6
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 6.0e-43 179.1 433 36.5
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 7.8e-43 178.7 454 35.2
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 1.0e-42 178.3 433 36.5
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 1.3e-42 177.9 432 36.3
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 1.3e-42 177.9 420 35.7
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 1.7e-42 177.6 444 37.2
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 1.7e-42 177.6 380 38.2
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 3.0e-42 176.8 432 34.0
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 3.0e-42 176.8 431 33.9
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 3.9e-42 176.4 431 34.6
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 6.6e-42 175.6 454 35.9
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.1e-41 174.9 434 35.7
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 4.3e-41 172.9 449 34.1
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 5.6e-41 172.6 419 34.8
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 9.5e-41 171.8 440 35.7
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 9.5e-41 171.8 424 37.3
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 3.6e-40 169.9 436 35.8
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 4.7e-40 169.5 482 32.6
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 1.4e-39 167.9 446 34.3
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 2.3e-39 167.2 447 35.8
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 4.0e-39 166.4 437 36.4
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 8.9e-39 165.2 411 34.3
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.4e-38 163.3 336 39.6
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 9.9e-38 161.8 435 35.2
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 9.9e-38 161.8 428 35.5
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 9.9e-38 161.8 428 35.5
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 6.0e-35 152.5 419 32.2
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 2.1e-32 144.1 323 36.5
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 2.4e-28 130.6 172 47.7
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 1.6e-27 127.9 440 31.4
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 2.3e-26 124.0 382 31.4
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 4.3e-25 119.8 421 31.1
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 3.5e-19 100.1 442 27.1
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 4.8e-16 89.7 459 27.2
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 6.2e-16 89.4 364 27.7
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 1.4e-15 88.2 425 27.1
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 2.2e-13 80.9 365 28.5
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 8.1e-08 62.4 60 55.0
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-07 59.7 50 52.0


User provided reference genes

Program Settings