Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 0.0e+00 1149.0 569 100.0
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 1.8e-254 882.5 572 76.9
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 2.9e-249 865.1 572 74.1
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 7.4e-245 850.5 569 73.6
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 2.9e-241 838.6 570 71.8
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 2.9e-241 838.6 571 72.9
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 1.1e-240 836.6 572 73.6
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 2.1e-239 832.4 571 72.3
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 5.1e-238 827.8 568 72.7
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 6.7e-238 827.4 573 71.0
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 3.3e-237 825.1 571 72.0
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 3.7e-236 821.6 591 70.2
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.2e-234 816.6 570 71.2
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 1.2e-234 816.6 569 69.9
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.4e-234 815.1 569 70.1
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 4.5e-234 814.7 572 71.5
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.7e-233 812.8 577 69.5
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 8.5e-233 810.4 569 69.6
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.1e-232 810.1 564 70.2
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 9.4e-232 807.0 598 67.4
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 4.6e-231 804.7 570 69.3
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 1.8e-230 802.7 569 69.4
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 3.9e-230 801.6 570 69.5
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 8.8e-230 800.4 573 69.1
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 3.3e-229 798.5 574 70.0
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 3.3e-229 798.5 566 69.1
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 4.4e-229 798.1 577 68.8
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 9.7e-229 797.0 566 69.1
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.4e-227 793.1 584 68.0
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 9.1e-227 790.4 569 69.1
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.5e-226 789.6 567 71.1
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 2.6e-226 788.9 583 68.8
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 5.9e-226 787.7 570 69.3
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 7.7e-226 787.3 566 68.2
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 7.7e-226 787.3 569 69.1
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 6.5e-225 784.3 576 69.4
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 8.5e-225 783.9 571 67.4
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 4.2e-224 781.6 571 68.0
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 4.2e-224 781.6 581 68.0
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 1.2e-223 780.0 577 69.0
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 5.2e-222 774.6 568 66.0
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 1.5e-221 773.1 565 67.1
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 6.3e-220 767.7 536 71.6
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 4.1e-219 765.0 565 68.1
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 3.5e-218 761.9 566 65.5
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 3.5e-218 761.9 595 65.5
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 7.7e-218 760.8 566 65.4
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.3e-217 760.0 571 67.1
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 4.2e-216 755.0 569 65.6
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 2.7e-215 752.3 566 67.0
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 2.3e-214 749.2 571 65.3
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 7.0e-211 737.6 543 65.2
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 2.7e-210 735.7 585 65.8
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 1.2e-207 726.9 523 70.2
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 1.6e-207 726.5 567 64.6
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 2.1e-207 726.1 567 64.4
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 8.0e-207 724.2 631 60.7
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 6.8e-206 721.1 570 62.6
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 8.8e-206 720.7 586 62.8
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.2e-205 720.3 529 67.9
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.7e-204 716.5 567 64.2
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.8e-204 715.7 567 64.2
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 3.7e-204 715.3 565 63.2
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 6.3e-204 714.5 565 64.6
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 6.3e-204 714.5 567 64.2
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 6.3e-204 714.5 563 63.1
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.4e-203 713.4 565 64.4
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.4e-203 713.4 569 64.1
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.4e-203 713.4 573 63.4
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 4.1e-203 711.8 572 60.3
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 5.4e-203 711.4 566 64.3
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 5.4e-203 711.4 575 63.5
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 2.9e-201 705.7 569 63.6
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 9.5e-200 700.7 570 61.4
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 6.1e-199 698.0 567 63.0
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.5e-189 666.8 574 60.3
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 2.0e-186 656.4 537 64.1
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 5.9e-186 654.8 574 61.7
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 5.2e-182 641.7 550 59.1
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.9e-176 623.2 590 55.8
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 5.2e-174 615.1 570 56.7
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 3.4e-173 612.5 662 53.2
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 5.8e-173 611.7 570 54.4
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 2.5e-168 596.3 577 54.6
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.5e-168 596.3 565 52.4
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 6.4e-164 581.6 565 50.4
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.3e-161 573.9 570 52.8
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 7.3e-160 568.2 564 52.0
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 1.5e-157 560.5 565 49.2
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 3.4e-149 532.7 587 51.8
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 4.9e-148 528.9 575 47.8
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 5.8e-141 505.4 294 78.6
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 4.2e-139 499.2 347 69.2
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 2.4e-134 483.4 567 44.3
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 8.4e-132 474.9 293 74.7
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 7.9e-130 468.4 294 74.8
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 7.4e-120 435.3 603 43.8
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 4.8e-119 432.6 598 45.2
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 3.8e-116 422.9 474 50.0
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.3e-111 407.9 244 78.3
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 1.2e-98 364.8 300 61.3
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.1e-91 341.7 678 30.8
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 7.2e-83 312.4 412 45.1
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 2.4e-78 297.4 214 72.0
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 4.3e-75 286.6 212 69.8
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 3.6e-74 283.5 214 65.9
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 8.3e-71 272.3 618 32.0
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 3.6e-66 256.9 611 30.8
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 4.4e-64 250.0 208 63.0
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.7e-63 246.9 208 62.0
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 4.9e-63 246.5 208 62.0
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 4.1e-62 243.4 197 58.4
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.7e-55 221.5 170 62.9
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.4e-49 201.8 104 84.6
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 1.2e-37 162.2 198 48.0
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 3.6e-34 150.6 131 58.0
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 5.3e-33 146.7 85 74.1
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.2e-24 119.0 365 26.3
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.7e-23 115.2 456 25.2
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.5e-19 102.1 87 60.9
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 6.5e-15 86.7 46 91.3
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 8.4e-15 86.3 48 81.2
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 9.7e-11 72.8 56 62.5
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 3.7e-10 70.9 56 62.5
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 3.4e-08 64.3 31 80.6
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 3.4e-08 64.3 31 80.6
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 3.4e-08 64.3 31 80.6
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 3.4e-08 64.3 31 80.6
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 3.4e-08 64.3 115 39.1
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.0e-07 62.8 31 77.4
Nn2g11046 Nelumbo nucifera HOM05D006175 ORTHO05D008081 5.0e-07 60.5 51 54.9
CAN.G93.25 Capsicum annuum HOM05D000544 ORTHO05D000137 9.4e-06 56.2 41 58.5


User provided reference genes

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