Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 0.0e+00 1355.9 691 100.0
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 2.6e-292 1008.4 775 68.8
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 3.7e-291 1004.6 752 69.0
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 1.2e-286 989.6 756 67.7
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 2.8e-286 988.4 723 70.3
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 1.8e-282 975.7 762 66.4
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 1.0e-280 969.9 765 65.6
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 3.0e-280 968.4 758 66.5
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 4.3e-279 964.5 755 66.5
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 7.5e-276 953.7 763 66.3
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 1.7e-275 952.6 727 66.7
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 6.4e-275 950.7 754 66.7
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 1.4e-274 949.5 757 65.7
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 7.0e-274 947.2 748 65.6
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 2.7e-273 945.3 755 65.3
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 6.6e-272 940.6 755 65.0
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 1.9e-271 939.1 756 64.4
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 4.3e-271 937.9 767 63.4
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 2.1e-270 935.6 750 64.8
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 1.5e-268 929.5 755 63.7
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 2.0e-268 929.1 766 63.6
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 2.6e-268 928.7 754 65.0
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 5.8e-268 927.5 752 64.6
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 1.3e-267 926.4 759 63.4
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 2.9e-267 925.2 758 64.4
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 4.9e-267 924.5 758 63.1
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 2.4e-266 922.2 750 63.5
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 5.4e-266 921.0 757 62.9
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 3.5e-265 918.3 751 64.0
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 7.8e-265 917.1 752 63.2
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 1.0e-264 916.8 755 63.6
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.3e-264 916.4 756 64.6
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 1.7e-264 916.0 753 62.9
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 2.3e-264 915.6 763 63.4
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 3.9e-264 914.8 735 65.0
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 5.6e-263 911.0 766 61.5
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 5.6e-263 911.0 753 63.9
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 1.2e-262 909.8 739 64.8
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 2.8e-262 908.7 766 61.4
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 4.7e-262 907.9 739 64.7
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 8.1e-262 907.1 776 61.2
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 1.1e-261 906.7 761 62.8
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.1e-261 905.2 760 62.5
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 5.2e-261 904.4 761 63.6
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 6.8e-261 904.0 748 62.4
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 1.5e-260 902.9 757 62.4
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 3.2e-258 895.2 730 64.8
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 5.4e-258 894.4 751 63.4
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 5.4e-258 894.4 759 62.7
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.6e-257 892.9 781 61.1
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 6.0e-257 891.0 750 61.9
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 1.1e-255 886.7 762 63.8
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.4e-253 879.0 807 59.0
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 3.1e-253 878.6 750 62.1
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 5.2e-253 877.9 766 59.5
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 1.5e-252 876.3 726 63.5
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 3.4e-252 875.2 752 60.5
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 1.7e-251 872.8 762 61.4
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 1.4e-250 869.8 758 61.6
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 2.7e-249 865.5 707 63.9
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 1.0e-248 863.6 760 63.7
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 1.8e-245 852.8 762 60.2
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 1.2e-244 850.1 761 60.7
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 1.6e-241 839.7 763 59.8
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 5.6e-239 831.2 707 63.1
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 2.4e-237 825.9 755 60.0
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 4.0e-237 825.1 749 58.9
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 5.3e-237 824.7 756 60.1
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 3.2e-234 815.5 759 58.4
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 5.5e-234 814.7 759 58.0
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 4.6e-233 811.6 759 57.6
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 4.6e-233 811.6 759 57.6
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 4.6e-233 811.6 758 58.0
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 1.3e-232 810.1 759 57.4
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 4.8e-230 801.6 709 60.1
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 5.3e-229 798.1 759 57.6
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 5.3e-229 798.1 783 55.8
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 1.5e-228 796.6 758 56.5
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 3.9e-224 781.9 649 62.2
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 5.1e-224 781.6 733 56.8
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 1.9e-223 779.6 757 56.5
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 8.2e-222 774.2 920 48.9
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 2.4e-221 772.7 757 55.4
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 3.1e-221 772.3 674 60.5
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 2.0e-220 769.6 705 58.4
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 5.0e-219 765.0 750 57.2
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 1.1e-218 763.8 762 55.4
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 1.2e-217 760.4 750 56.9
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 2.1e-217 759.6 749 55.3
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 1.7e-214 750.0 704 58.2
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 5.9e-212 741.5 522 70.5
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 2.2e-211 739.6 512 71.7
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 4.2e-210 735.3 588 64.1
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.4e-207 725.3 637 61.5
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 2.0e-204 716.5 512 69.9
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 2.7e-188 662.9 761 48.9
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 1.9e-186 656.8 804 46.5
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 5.7e-175 618.6 832 43.5
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 7.0e-173 611.7 748 47.6
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 3.6e-169 599.4 760 44.3
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 8.0e-169 598.2 751 46.6
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.5e-167 594.0 750 46.4
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 6.4e-166 588.6 751 46.1
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.8e-165 587.0 750 46.0
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 1.8e-160 570.5 715 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 1.9e-154 550.4 730 43.7
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 1.7e-147 527.3 646 44.7
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 6.8e-144 515.4 455 62.0
Cpa.g.sc111.49 Carica papaya HOM05D004811 ORTHO05D006888 7.1e-117 425.6 334 63.5
Zm00001eb287160 Zea mays HOM05D004811 ORTHO05D006888 9.3e-109 398.7 456 52.0
HPP92_028180 Vanilla planifolia HOM05D004811 ORTHO05D006888 5.7e-98 362.8 390 51.0
Hund15153 Selenicereus undatus HOM05D004811 ORTHO05D006888 1.3e-78 298.5 176 79.5
CAN.G606.9 Capsicum annuum HOM05D004811 ORTHO05D006888 3.2e-77 293.9 365 49.0
CAN.G606.10 Capsicum annuum HOM05D004811 ORTHO05D006888 1.2e-71 275.4 182 74.7
Sed0024483 Sechium edule HOM05D004811 ORTHO05D006888 2.1e-68 264.6 278 54.3
CAN.G606.11 Capsicum annuum HOM05D004811 ORTHO05D006888 1.0e-67 262.3 242 58.3
MCO07G203 Micromonas commoda HOM05D004811 ORTHO05D006888 1.4e-67 261.9 712 28.8
PRCOL_00007255 Prasinoderma coloniale HOM05D004811 ORTHO05D006888 1.8e-67 261.5 679 29.3
QL02p036851 Quercus lobata HOM05D004811 ORTHO05D006888 1.5e-66 258.5 238 59.7
QL02p036387 Quercus lobata HOM05D004811 ORTHO05D006888 2.6e-66 257.7 238 59.7
Cre12.g506050 Chlamydomonas reinhardtii HOM05D004811 ORTHO05D006888 1.4e-59 235.3 541 29.8
Nitab4.5_0009440g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 8.6e-54 216.1 130 77.7
HPP92_028179 Vanilla planifolia HOM05D004811 ORTHO05D006888 2.0e-47 194.9 167 62.3
TPR.G39924 Trifolium pratense HOM05D004811 ORTHO05D006888 1.0e-46 192.6 206 53.4
TPR.G33000 Trifolium pratense HOM05D004811 ORTHO05D006888 2.3e-43 181.4 109 76.1
Cpa.g.sc111.45 Carica papaya HOM05D004811 ORTHO05D006888 2.5e-37 161.4 185 53.0
Actinidia09194 Actinidia chinensis HOM05D004811 ORTHO05D006888 2.1e-36 158.3 116 70.7
Sed0006977 Sechium edule HOM05D004811 ORTHO05D006888 3.6e-36 157.5 134 62.7
Hund15156 Selenicereus undatus HOM05D004811 ORTHO05D006888 2.3e-35 154.8 163 58.9
Cpa.g.sc111.48 Carica papaya HOM05D004811 ORTHO05D006888 1.9e-29 135.2 96 68.8
SGA_v2.0_scaffold753G53552 Striga asiatica HOM05D004811 ORTHO05D006888 1.9e-24 118.6 130 56.9
Actinidia09197 Actinidia chinensis HOM05D004811 ORTHO05D006888 7.3e-21 106.7 111 50.5
Actinidia09195 Actinidia chinensis HOM05D004811 ORTHO05D006888 8.4e-17 93.2 80 57.5
SalBow3G0991 Salvia bowleyana HOM05D004811 ORTHO05D006888 3.2e-16 91.3 62 69.4
Thhalv10029084m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 2.1e-15 88.6 66 65.2
Gohir.A02G097201 Gossypium hirsutum HOM05D004811 ORTHO05D006888 3.8e-09 67.8 87 41.4
Actinidia09206 Actinidia chinensis HOM05D004811 ORTHO05D009793 1.4e-08 65.9 110 38.2
C03p50580 Brassica napus HOM05D004811 ORTHO05D017514 1.3e-06 59.3 104 35.6
Gohir.D01G069250 Gossypium hirsutum HOM05D004811 ORTHO05D006888 2.3e-06 58.5 60 46.7
BolC3t17347H Brassica oleracea HOM05D004811 ORTHO05D017514 3.9e-06 57.8 100 36.0
PSO541G4576 Papaver somniferum HOM05D000002 ORTHO05D000001 6.7e-06 57.0 59 47.5


User provided reference genes

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