Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021732 Daucus carota HOM05D004929 ORTHO05D006492 4.7e-202 707.6 349 100.0
Nn8g40033 Nelumbo nucifera HOM05D004929 ORTHO05D006492 4.8e-162 574.7 332 82.2
Peaxi162Scf00129g01650 Petunia axillaris HOM05D004929 ORTHO05D006492 9.0e-161 570.5 335 81.2
Nitab4.5_0001860g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 2.0e-160 569.3 330 80.9
TAR633G2310 Trochodendron aralioides HOM05D004929 ORTHO05D006492 3.4e-160 568.5 334 81.7
Peaxi162Scf03028g00012 Petunia axillaris HOM05D004929 ORTHO05D006492 1.0e-159 567.0 335 80.6
CAN.G473.20 Capsicum annuum HOM05D004929 ORTHO05D006492 2.9e-159 565.5 331 81.3
Dinv25726 Davidia involucrata HOM05D004929 ORTHO05D006492 1.1e-158 563.5 346 78.3
Lju41A43T26 Lonicera japonica HOM05D004929 ORTHO05D006492 1.9e-158 562.8 340 78.2
Solyc02g093440.4 Solanum lycopersicum HOM05D004929 ORTHO05D006492 2.5e-158 562.4 327 81.0
PGSC0003DMG400012608 Solanum tuberosum HOM05D004929 ORTHO05D006492 7.2e-158 560.8 331 80.4
Cc09_g04510 Coffea canephora HOM05D004929 ORTHO05D006492 9.4e-158 560.5 340 79.7
Sopen02g038230 Solanum pennellii HOM05D004929 ORTHO05D006492 1.2e-157 560.1 327 81.0
Cfa007339 Carpinus fangiana HOM05D004929 ORTHO05D006492 1.6e-157 559.7 339 79.1
Ciclev10015593m.g Citrus clementina HOM05D004929 ORTHO05D006492 1.6e-157 559.7 334 80.2
Migut.K01411 Erythranthe guttata HOM05D004929 ORTHO05D006492 3.6e-157 558.5 330 80.0
CiPaw.03G045500 Carya illinoinensis HOM05D004929 ORTHO05D006492 7.9e-157 557.4 331 79.8
Actinidia05982 Actinidia chinensis HOM05D004929 ORTHO05D006492 2.3e-156 555.8 331 80.1
Haze_14758 Corylus avellana HOM05D004929 ORTHO05D006492 3.9e-156 555.1 339 78.5
vmacro05876 Vaccinium macrocarpon HOM05D004929 ORTHO05D006492 6.7e-156 554.3 327 79.2
GSVIVG01032385001 Vitis vinifera HOM05D004929 ORTHO05D006492 1.1e-155 553.5 327 81.0
MD09G1023000 Malus domestica HOM05D004929 ORTHO05D006492 1.7e-154 549.7 327 80.4
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 2.8e-154 548.9 328 78.7
CiPaw.04G029600 Carya illinoinensis HOM05D004929 ORTHO05D006492 4.8e-154 548.1 338 78.4
QL02p074005 Quercus lobata HOM05D004929 ORTHO05D006492 4.8e-154 548.1 330 79.1
Rhsim10G0014700 Rhododendron simsii HOM05D004929 ORTHO05D006492 4.8e-154 548.1 331 78.9
SalBow7G3047 Salvia bowleyana HOM05D004929 ORTHO05D006492 4.8e-154 548.1 327 79.2
Duzib147G0164 Durio zibethinus HOM05D004929 ORTHO05D006492 6.3e-154 547.7 337 77.4
PSO699G0033 Papaver somniferum HOM05D004929 ORTHO05D006492 8.2e-154 547.4 327 78.6
Prupe.3G293800 Prunus persica HOM05D004929 ORTHO05D006492 1.4e-153 546.6 337 77.4
MELO3C021592.2 Cucumis melo HOM05D004929 ORTHO05D006492 1.8e-153 546.2 339 76.4
MD17G1022300 Malus domestica HOM05D004929 ORTHO05D006492 1.8e-153 546.2 327 80.1
ClCG09G019380 Citrullus lanatus HOM05D004929 ORTHO05D006492 2.4e-153 545.8 339 76.4
Sed0020215 Sechium edule HOM05D004929 ORTHO05D006492 3.1e-153 545.4 339 76.7
Thecc.04G019500 Theobroma cacao HOM05D004929 ORTHO05D006492 4.1e-153 545.0 327 79.2
PGR142G3088 Punica granatum HOM05D004929 ORTHO05D006492 5.3e-153 544.7 327 77.7
FvH4_6g51800 Fragaria vesca HOM05D004929 ORTHO05D006492 1.2e-152 543.5 337 77.2
PSO384G0906 Papaver somniferum HOM05D004929 ORTHO05D006492 1.2e-152 543.5 327 78.3
Potri.001G343400 Populus trichocarpa HOM05D004929 ORTHO05D006492 1.2e-152 543.5 334 77.8
MSTRG.3138 Avicennia marina HOM05D004929 ORTHO05D006492 3.4e-152 542.0 329 79.0
CsaV3_5G027030 Cucumis sativus L. HOM05D004929 ORTHO05D006492 3.4e-152 542.0 329 77.5
Sabra16G0222700 Salix brachista HOM05D004929 ORTHO05D006492 3.4e-152 542.0 334 77.8
Hund23289 Selenicereus undatus HOM05D004929 ORTHO05D006492 3.4e-152 542.0 341 76.5
FAN09G2944 Fragaria x ananassa HOM05D004929 ORTHO05D006492 4.5e-152 541.6 337 76.9
FAN14G2766 Fragaria x ananassa HOM05D004929 ORTHO05D006492 4.5e-152 541.6 337 77.2
RcHm_v2.0_Chr2g0173281 Rosa chinensis HOM05D004929 ORTHO05D006492 4.5e-152 541.6 336 78.0
Thhalv10020980m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 1.7e-151 539.7 327 78.3
Ah.03g137000 Amaranthus hybridus HOM05D004929 ORTHO05D006492 2.2e-151 539.3 324 78.1
Lsat_1_v5_gn_0_18301 Lactuca sativa HOM05D004929 ORTHO05D006492 2.2e-151 539.3 327 79.5
Manes.15G151900 Manihot esculenta HOM05D004929 ORTHO05D006492 2.9e-151 538.9 341 76.2
EL10Ac6g14097 Beta vulgaris HOM05D004929 ORTHO05D006492 3.8e-151 538.5 325 77.5
Sed0027438 Sechium edule HOM05D004929 ORTHO05D006492 5.0e-151 538.1 329 77.2
BraA03t12414Z Brassica rapa HOM05D004929 ORTHO05D006492 1.4e-150 536.6 337 76.0
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 1.9e-150 536.2 333 75.1
CANSAT64G1903 Cannabis sativa HOM05D004929 ORTHO05D006492 2.5e-150 535.8 334 76.3
AL3G10510 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 5.5e-150 534.6 335 76.1
CARHR075280 Cardamine hirsuta HOM05D004929 ORTHO05D006492 7.2e-150 534.3 336 75.0
HanXRQChr17g0548651 Helianthus annuus HOM05D004929 ORTHO05D006492 7.2e-150 534.3 330 78.8
AT3G01640 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 9.4e-150 533.9 336 75.6
HanXRQChr17g0548641 Helianthus annuus HOM05D004929 ORTHO05D006492 9.4e-150 533.9 341 77.4
A03p32440 Brassica napus HOM05D004929 ORTHO05D006492 1.6e-149 533.1 337 75.7
BcaC01g04530 Brassica carinata HOM05D004929 ORTHO05D006492 2.7e-149 532.3 326 77.0
FAN05G4087 Fragaria x ananassa HOM05D004929 ORTHO05D006492 3.6e-149 531.9 339 75.5
C03p39500 Brassica napus HOM05D004929 ORTHO05D006492 4.7e-149 531.6 326 76.7
Carub.0003s0042 Capsella rubella HOM05D004929 ORTHO05D006492 6.1e-149 531.2 327 76.5
FAN02G0047 Fragaria x ananassa HOM05D004929 ORTHO05D006492 7.9e-149 530.8 349 73.9
Aa31LG5G10780 Aethionema arabicum HOM05D004929 ORTHO05D006492 1.4e-148 530.0 327 77.1
Gohir.D09G029800 Gossypium hirsutum HOM05D004929 ORTHO05D006492 1.8e-148 529.6 329 75.7
Gorai.006G034800 Gossypium raimondii HOM05D004929 ORTHO05D006492 1.8e-148 529.6 329 76.0
Gohir.A09G030100 Gossypium hirsutum HOM05D004929 ORTHO05D006492 2.3e-148 529.3 329 75.7
THA.LOC104821096 Tarenaya hassleriana HOM05D004929 ORTHO05D006492 3.0e-148 528.9 336 75.3
BolC3t16218H Brassica oleracea HOM05D004929 ORTHO05D006492 5.2e-148 528.1 326 76.1
ECA246G1179 Erigeron canadensis HOM05D004929 ORTHO05D006492 6.7e-148 527.7 336 77.4
Sp3g00410 Schrenkiella parvula HOM05D004929 ORTHO05D006492 1.1e-147 526.9 327 76.5
TWI12G0632 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 2.6e-147 525.8 324 77.2
Aqoxy5G00914 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 3.3e-147 525.4 335 74.6
Glyma.05G002500 Glycine max HOM05D004929 ORTHO05D006492 3.3e-147 525.4 324 76.5
TWI56G0780 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 9.7e-147 523.9 326 76.1
HPP92_015407 Vanilla planifolia HOM05D004929 ORTHO05D006492 1.7e-146 523.1 327 75.2
BraA10t44472Z Brassica rapa HOM05D004929 ORTHO05D006492 3.7e-146 521.9 331 74.3
Medtr6g004430 Medicago truncatula HOM05D004929 ORTHO05D006492 3.7e-146 521.9 325 76.9
AUR62008872 Chenopodium quinoa HOM05D004929 ORTHO05D006492 4.8e-146 521.5 344 72.4
Aqoxy4G03095 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 1.1e-145 520.4 340 72.6
TPR.G31950 Trifolium pratense HOM05D004929 ORTHO05D006492 4.1e-145 518.5 331 75.2
arahy.Tifrunner.gnm1.ann1.FEY4ZS Arachis hypogaea HOM05D004929 ORTHO05D006492 1.2e-144 516.9 338 73.4
Thhalv10013912m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 1.2e-144 516.9 336 72.6
Phvul.004G004700 Phaseolus vulgaris HOM05D004929 ORTHO05D006492 1.6e-144 516.5 331 75.2
arahy.Tifrunner.gnm1.ann1.NF5K9F Arachis hypogaea HOM05D004929 ORTHO05D006492 2.0e-144 516.2 338 73.4
AUR62031837 Chenopodium quinoa HOM05D004929 ORTHO05D006492 2.6e-144 515.8 384 66.7
VMungo0464G1388 Vigna mungo HOM05D004929 ORTHO05D006492 5.9e-144 514.6 323 76.2
Lalb_Chr06g0176621 Lupinus albus HOM05D004929 ORTHO05D006492 7.7e-144 514.2 335 73.7
AL6G25200 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 3.8e-143 511.9 330 73.0
Lj2g0024676 Lotus japonicus HOM05D004929 ORTHO05D006492 5.0e-143 511.5 327 73.7
MBI05_g22077_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 1.1e-142 510.4 331 74.3
Carub.0006s1265 Capsella rubella HOM05D004929 ORTHO05D006492 1.9e-142 509.6 336 72.6
Ca_04143_v3 Cicer arietinum L. HOM05D004929 ORTHO05D006492 1.9e-142 509.6 332 75.0
CARHR198840 Cardamine hirsuta HOM05D004929 ORTHO05D006492 5.5e-142 508.1 326 73.9
AT5G14470 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 3.6e-141 505.4 328 72.3
BcaB08g36997 Brassica carinata HOM05D004929 ORTHO05D006492 8.0e-141 504.2 331 71.9
arahy.Tifrunner.gnm1.ann1.BJ3QP1 Arachis hypogaea HOM05D004929 ORTHO05D006492 4.0e-140 501.9 317 75.7
Zm00001eb025800 Zea mays HOM05D004929 ORTHO05D006492 6.7e-140 501.1 325 74.2
ATR0827G043 Amborella trichopoda HOM05D004929 ORTHO05D006492 8.8e-140 500.7 349 70.8
Duzib264G0638 Durio zibethinus HOM05D004929 ORTHO05D006492 2.6e-139 499.2 361 68.7
Oeu018151.1 Olea europaea HOM05D004929 ORTHO05D006492 1.1e-137 493.8 330 74.5
Os11g0217300 Oryza sativa ssp. japonica HOM05D004929 ORTHO05D006492 1.1e-137 493.8 326 74.2
BcaC04g19032 Brassica carinata HOM05D004929 ORTHO05D006492 1.2e-133 480.3 331 71.0
BcaB08g36995 Brassica carinata HOM05D004929 ORTHO05D006492 5.7e-131 471.5 337 69.4
Dinv33427 Davidia involucrata HOM05D004929 ORTHO05D006492 7.5e-131 471.1 277 79.8
SMO145G0043 Selaginella moellendorffii HOM05D004929 ORTHO05D006492 8.5e-127 457.6 321 67.6
SGA_v2.0_scaffold30G12409 Striga asiatica HOM05D004929 ORTHO05D006492 8.5e-127 457.6 270 80.0
SHI00354 Sapria himalayana HOM05D004929 ORTHO05D006492 3.6e-125 452.2 326 66.0
Eucgr.I01731 Eucalyptus grandis HOM05D004929 ORTHO05D006492 8.8e-124 447.6 272 77.6
Sc03g0007290 Simmondsia chinensis HOM05D004929 ORTHO05D006492 1.3e-122 443.7 269 76.6
COL.COLO4_29172 Corchorus olitorius HOM05D004929 ORTHO05D006492 3.7e-122 442.2 325 67.1
Nitab4.5_0006683g0060 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.3e-119 433.7 331 65.6
A10p24090 Brassica napus HOM05D004929 ORTHO05D006492 2.3e-119 433.0 330 64.2
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 2.1e-117 426.4 269 74.7
AagrBONN_evm.TU.Sc2ySwM_228.449 Anthoceros agrestis HOM05D000718 ORTHO05D002712 1.7e-111 406.8 323 61.3
Mapoly0023s0058 Marchantia polymorpha HOM05D004929 ORTHO05D006492 3.6e-109 399.1 343 59.8
HPP92_026990 Vanilla planifolia HOM05D004929 ORTHO05D006492 1.0e-108 397.5 246 76.4
Psat1g053480 Pisum sativum HOM05D004929 ORTHO05D006492 3.1e-108 396.0 246 76.4
CBR_g3618 Chara braunii HOM05D004929 ORTHO05D006492 5.4e-105 385.2 325 59.4
SGA_v2.0_scaffold47G17516 Striga asiatica HOM05D004929 ORTHO05D006492 5.4e-105 385.2 332 60.5
Pp3c22_9380 Physcomitrium patens HOM05D004929 ORTHO05D006492 8.6e-103 377.9 274 64.6
ATR0681G379 Amborella trichopoda HOM05D004929 ORTHO05D006492 7.5e-99 364.8 231 76.2
Atru.chr6.2430 Acer truncatum HOM05D004929 ORTHO05D006492 1.7e-98 363.6 223 78.9
BolC9t59108H Brassica oleracea HOM05D004929 ORTHO05D006492 8.4e-90 334.7 339 53.4
SHI25478 Sapria himalayana HOM05D004929 ORTHO05D006492 8.4e-90 334.7 262 63.7
C09p62710 Brassica napus HOM05D004929 ORTHO05D006492 5.4e-89 332.0 330 53.3
CDE07G0337 Ceratophyllum demersum HOM05D004929 ORTHO05D006492 1.6e-88 330.5 204 75.5
Cre02.g107600 Chlamydomonas reinhardtii HOM05D004929 ORTHO05D006492 5.1e-87 325.5 339 53.4
MCO09G795 Micromonas commoda HOM05D004929 ORTHO05D006492 3.2e-81 306.2 329 49.8
Nitab4.5_0000040g0670 Nicotiana tabacum HOM05D004929 ORTHO05D006492 5.4e-81 305.4 327 52.6
PRCOL_00005101 Prasinoderma coloniale HOM05D004929 ORTHO05D006492 7.1e-81 305.1 341 51.3
Oeu033729.3 Olea europaea HOM05D004929 ORTHO05D006492 1.8e-71 273.9 208 68.8
Nitab4.5_0001550g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.5e-67 260.8 212 64.2
MBI05_g01825_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 9.0e-60 235.0 222 56.3
BcaB08g36982 Brassica carinata HOM05D004929 ORTHO05D006492 1.3e-55 221.1 143 72.7
MSTRG.3285 Avicennia marina HOM05D004929 ORTHO05D006492 1.4e-52 211.1 131 75.6
Atru.chr6.2429 Acer truncatum HOM05D004929 ORTHO05D006492 1.1e-49 201.4 115 80.9
BolC9t59344H Brassica oleracea HOM05D004929 ORTHO05D006492 1.4e-44 184.5 182 56.6
CDE07G1161 Ceratophyllum demersum HOM05D004929 ORTHO05D043891 3.0e-31 140.2 91 74.7
BcaNung06761 Brassica carinata HOM05D004929 ORTHO05D006492 4.4e-22 109.8 70 71.4
MD17G1022500 Malus domestica HOM05D004929 ORTHO05D006492 7.5e-22 109.0 65 76.9
Sopen02g038030 Solanum pennellii HOM05D004929 ORTHO05D006492 2.8e-21 107.1 68 70.6
A10p26090 Brassica napus HOM05D004929 ORTHO05D006492 3.8e-18 96.7 174 40.8
Sp6g29550 Schrenkiella parvula HOM05D004929 ORTHO05D043891 3.5e-11 73.6 52 71.2
arahy.Tifrunner.gnm1.ann1.6CI6DX Arachis hypogaea HOM05D004929 ORTHO05D031499 2.3e-10 70.9 40 75.0
arahy.Tifrunner.gnm1.ann1.XQCE19 Arachis hypogaea HOM05D004929 ORTHO05D031499 2.3e-10 70.9 43 69.8


User provided reference genes

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