Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 0.0e+00 2986.1 1580 100.0
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.2e-66 260.0 152 86.2
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.7e-57 229.6 151 76.2
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 2.2e-57 229.2 151 74.8
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 6.5e-57 227.6 152 76.3
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.5e-56 226.5 151 75.5
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.5e-56 226.5 151 73.5
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 3.2e-56 225.3 147 77.6
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.2e-56 224.9 151 73.5
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 4.2e-56 224.9 152 74.3
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 7.2e-56 224.2 152 75.0
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 7.2e-56 224.2 152 74.3
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 7.2e-56 224.2 151 74.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 9.4e-56 223.8 152 73.0
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.2e-55 223.4 148 76.4
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.2e-55 223.4 148 73.6
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.2e-55 223.4 151 72.8
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.6e-55 223.0 149 75.2
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.1e-55 222.6 151 72.8
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.1e-55 222.6 150 74.0
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 2.1e-55 222.6 151 72.2
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.7e-55 222.2 210 59.0
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 2.7e-55 222.2 152 71.7
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 3.6e-55 221.9 210 59.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 3.6e-55 221.9 151 73.5
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.7e-55 221.5 152 73.7
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 6.1e-55 221.1 152 73.0
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.0e-54 220.3 151 72.8
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.4e-54 219.9 148 72.3
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.8e-54 219.5 152 72.4
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.8e-54 219.5 152 72.4
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.8e-54 219.5 152 72.4
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.8e-54 219.5 152 72.4
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.3e-54 219.2 151 72.8
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.0e-54 218.8 148 73.0
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 4.0e-54 218.4 151 71.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 5.2e-54 218.0 145 76.6
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.7e-54 217.6 152 71.7
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 8.8e-54 217.2 148 70.3
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 8.8e-54 217.2 147 72.1
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.5e-53 216.5 152 71.7
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.0e-53 216.1 151 72.2
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.0e-53 216.1 148 73.0
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 2.0e-53 216.1 151 70.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 2.6e-53 215.7 150 72.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 4.4e-53 214.9 151 70.2
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 4.4e-53 214.9 150 70.7
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 9.7e-53 213.8 147 72.8
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.3e-52 213.4 147 72.8
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.3e-52 213.4 149 69.1
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.7e-52 213.0 147 71.4
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 2.8e-52 212.2 143 73.4
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 4.8e-52 211.5 148 69.6
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 6.3e-52 211.1 208 56.7
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 6.3e-52 211.1 151 70.9
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.8e-51 209.5 146 70.5
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.8e-51 209.5 133 77.4
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.4e-51 209.1 152 67.8
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.4e-51 209.1 148 68.9
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 9.1e-51 207.2 206 56.3
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 1.2e-50 206.8 146 69.9
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.6e-50 206.5 146 69.9
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 2.0e-50 206.1 152 67.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 3.5e-50 205.3 147 68.7
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 7.7e-50 204.1 160 66.2
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.7e-49 203.0 147 68.0
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.7e-49 203.0 147 68.7
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 3.8e-49 201.8 152 66.4
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 8.5e-49 200.7 147 69.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.5e-48 199.9 147 66.7
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 9.4e-48 197.2 148 66.2
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.6e-47 196.4 147 68.0
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 3.6e-47 195.3 147 68.0
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 4.7e-47 194.9 147 66.7
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 4.7e-47 194.9 147 66.7
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 8.0e-47 194.1 147 66.0
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 2.3e-46 192.6 152 63.8
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.3e-46 192.6 149 67.8
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 6.8e-46 191.0 143 68.5
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 6.8e-46 191.0 143 68.5
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 8.8e-46 190.7 148 66.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.2e-45 190.3 147 64.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 1.5e-45 189.9 147 66.7
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.0e-45 189.5 143 67.8
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 3.4e-45 188.7 153 64.1
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 3.4e-45 188.7 143 67.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.4e-45 188.7 143 67.8
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 3.4e-45 188.7 143 67.8
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.7e-44 186.4 147 66.0
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 3.7e-44 185.3 143 64.3
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 8.3e-44 184.1 145 61.4
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 2.2e-41 176.0 105 82.9
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.9e-41 175.6 148 60.1
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 1.1e-40 173.7 109 79.8
DCAR_031868 Daucus carota HOM05D009167 ORTHO05D013862 3.2e-40 172.2 384 32.6
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 5.5e-40 171.4 149 60.4
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 6.8e-38 164.5 147 59.9
DCAR_028319 Daucus carota HOM05D009167 ORTHO05D177151 3.4e-37 162.2 195 39.5
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 4.4e-37 161.8 141 57.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 2.4e-35 156.0 146 54.1
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 3.1e-35 155.6 149 57.0
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 7.0e-35 154.5 115 63.5
DCAR_032053 Daucus carota HOM05D009167 ORTHO05D013862 9.2e-35 154.1 492 28.7
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 7.7e-34 151.0 144 52.1
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.3e-33 150.2 145 51.7
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.2e-30 138.3 142 49.3
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 8.9e-30 137.5 89 78.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.9e-28 132.5 159 44.0
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.9e-28 131.7 77 84.4
DCAR_031443 Daucus carota HOM05D009167 ORTHO05D177593 7.0e-27 127.9 705 24.7
DCAR_023733 Daucus carota HOM05D009167 ORTHO05D175919 2.0e-21 109.8 269 29.4
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 2.8e-15 89.4 69 59.4
DCAR_027461 Daucus carota HOM05D011966 ORTHO05D013862 5.2e-14 85.1 223 25.6
DCAR_005211 Daucus carota HOM05D011966 ORTHO05D013862 2.6e-13 82.8 223 25.1
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.1e-11 77.4 66 56.1
DCAR_031905 Daucus carota HOM05D011966 ORTHO05D013862 1.9e-11 76.6 223 25.6
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 4.7e-07 62.0 38 71.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 4.7e-07 62.0 38 68.4
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.1e-06 60.8 137 28.5


User provided reference genes

Program Settings