Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021319 Daucus carota HOM05D002927 ORTHO05D017896 1.1e-116 423.3 212 100.0
DCAR_016229 Daucus carota HOM05D002927 ORTHO05D003841 9.9e-78 293.9 217 70.0
Dinv30531 Davidia involucrata HOM05D002927 ORTHO05D003841 9.0e-71 270.8 214 65.0
Lj5C63T3 Lonicera japonica HOM05D002927 ORTHO05D003841 3.4e-70 268.9 215 62.8
MSTRG.22704 Avicennia marina HOM05D002927 ORTHO05D003841 3.2e-68 262.3 214 61.7
vmacro18935 Vaccinium macrocarpon HOM05D002927 ORTHO05D003841 1.2e-67 260.4 207 62.3
MSTRG.11092 Avicennia marina HOM05D002927 ORTHO05D003841 3.0e-66 255.8 211 60.2
Rhsim08G0218500 Rhododendron simsii HOM05D002927 ORTHO05D003841 3.9e-66 255.4 215 60.9
GSVIVG01017154001 Vitis vinifera HOM05D002927 ORTHO05D003841 3.3e-65 252.3 214 62.6
Hma1.2p1_0682F.1_g202640 Hydrangea macrophylla HOM05D002927 ORTHO05D003841 7.4e-65 251.1 216 61.1
CSS0017782 Camellia sinensis var. sinensis HOM05D002927 ORTHO05D003841 4.8e-64 248.4 214 58.4
Oeu033496.1 Olea europaea HOM05D002927 ORTHO05D003841 8.2e-64 247.7 214 59.3
Oeu063956.1 Olea europaea HOM05D002927 ORTHO05D003841 1.8e-63 246.5 215 57.7
PGSC0003DMG400002639 Solanum tuberosum HOM05D002927 ORTHO05D003841 2.4e-63 246.1 212 59.9
Lsat_1_v5_gn_4_103500 Lactuca sativa HOM05D002927 ORTHO05D003841 5.3e-63 245.0 212 60.4
Haze_16459 Corylus avellana HOM05D002927 ORTHO05D003841 6.9e-63 244.6 203 61.6
CiPaw.02G152400 Carya illinoinensis HOM05D002927 ORTHO05D003841 9.0e-63 244.2 214 58.9
Actinidia01792 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.2e-62 243.8 207 57.5
Sopen03g039240 Solanum pennellii HOM05D002927 ORTHO05D003841 2.6e-62 242.7 212 59.0
Thecc.06G082500 Theobroma cacao HOM05D002927 ORTHO05D003841 3.4e-62 242.3 214 58.9
COL.COLO4_30327 Corchorus olitorius HOM05D002927 ORTHO05D003841 4.5e-62 241.9 214 59.3
Manes.04G121200 Manihot esculenta HOM05D002927 ORTHO05D003841 4.5e-62 241.9 215 59.1
TWI75G0487 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 5.8e-62 241.5 215 60.0
Peaxi162Scf00207g00840 Petunia axillaris HOM05D002927 ORTHO05D003841 1.3e-61 240.4 214 54.2
Solyc03g120350.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 1.3e-61 240.4 212 59.0
Cfa002048 Carpinus fangiana HOM05D002927 ORTHO05D003841 1.7e-61 240.0 203 60.6
Lj3g0020255 Lotus japonicus HOM05D002927 ORTHO05D003841 2.2e-61 239.6 214 58.4
Medtr2g102435 Medicago truncatula HOM05D002927 ORTHO05D003841 2.2e-61 239.6 208 55.8
Nn2g11837 Nelumbo nucifera HOM05D002927 ORTHO05D003841 2.2e-61 239.6 215 58.1
CAN.G395.20 Capsicum annuum HOM05D002927 ORTHO05D003841 2.9e-61 239.2 213 55.4
ClCG09G002330 Citrullus lanatus HOM05D002927 ORTHO05D003841 5.0e-61 238.4 205 56.6
Glyma.08G207800 Glycine max HOM05D002927 ORTHO05D003841 6.5e-61 238.0 215 58.1
ECA234G1721 Erigeron canadensis HOM05D002927 ORTHO05D003841 8.4e-61 237.7 212 58.5
HanXRQChr14g0455941 Helianthus annuus HOM05D002927 ORTHO05D003841 8.4e-61 237.7 216 58.8
Prupe.3G074300 Prunus persica HOM05D002927 ORTHO05D003841 1.1e-60 237.3 210 59.0
Manes.11G052000 Manihot esculenta HOM05D002927 ORTHO05D003841 1.4e-60 236.9 215 58.1
CsaV3_7G032990 Cucumis sativus L. HOM05D002927 ORTHO05D003841 1.9e-60 236.5 205 57.6
Nitab4.5_0003159g0060 Nicotiana tabacum HOM05D002927 ORTHO05D003841 3.2e-60 235.7 215 56.7
Peaxi162Scf00015g00253 Petunia axillaris HOM05D002927 ORTHO05D003841 3.2e-60 235.7 212 56.6
Sopen06g025070 Solanum pennellii HOM05D002927 ORTHO05D003841 3.2e-60 235.7 215 54.4
Lalb_Chr14g0373541 Lupinus albus HOM05D002927 ORTHO05D003841 4.2e-60 235.3 213 56.8
ECA232G1494 Erigeron canadensis HOM05D002927 ORTHO05D003841 5.5e-60 235.0 213 56.3
TAR624G0871 Trochodendron aralioides HOM05D002927 ORTHO05D003841 5.5e-60 235.0 214 56.5
PSO782G4571 Papaver somniferum HOM05D002927 ORTHO05D003841 9.3e-60 234.2 207 57.0
PGR102G2510 Punica granatum HOM05D002927 ORTHO05D003841 9.3e-60 234.2 208 56.7
MELO3C023369.2 Cucumis melo HOM05D002927 ORTHO05D003841 1.2e-59 233.8 205 56.6
PSO063G0077 Papaver somniferum HOM05D002927 ORTHO05D003841 1.2e-59 233.8 207 57.5
Sed0022010 Sechium edule HOM05D002927 ORTHO05D003841 1.2e-59 233.8 205 58.5
arahy.Tifrunner.gnm1.ann1.QQR1AK Arachis hypogaea HOM05D002927 ORTHO05D003841 2.7e-59 232.6 215 56.7
SalBow2G0578 Salvia bowleyana HOM05D002927 ORTHO05D003841 2.7e-59 232.6 214 55.1
Eucgr.F03005 Eucalyptus grandis HOM05D002927 ORTHO05D003841 3.5e-59 232.3 214 57.0
CAN.G438.51 Capsicum annuum HOM05D002927 ORTHO05D003841 4.6e-59 231.9 212 56.6
Ca_01105_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 6.1e-59 231.5 214 55.6
Glyma.07G034300 Glycine max HOM05D002927 ORTHO05D003841 6.1e-59 231.5 215 55.8
Psat5g299320 Pisum sativum HOM05D002927 ORTHO05D003841 6.1e-59 231.5 208 54.8
Hund30638 Selenicereus undatus HOM05D002927 ORTHO05D003841 6.1e-59 231.5 204 57.8
Glyma.15G013000 Glycine max HOM05D002927 ORTHO05D003841 7.9e-59 231.1 214 56.5
HanXRQChr10g0314931 Helianthus annuus HOM05D002927 ORTHO05D003841 7.9e-59 231.1 216 56.5
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.0e-58 230.7 203 57.1
arahy.Tifrunner.gnm1.ann1.A9FW4X Arachis hypogaea HOM05D002927 ORTHO05D003841 1.0e-58 230.7 215 56.7
Gohir.D05G128300 Gossypium hirsutum HOM05D002927 ORTHO05D003841 1.0e-58 230.7 214 56.1
MD17G1197900 Malus domestica HOM05D002927 ORTHO05D003841 1.0e-58 230.7 210 58.6
CiPaw.01G240700 Carya illinoinensis HOM05D002927 ORTHO05D003841 1.3e-58 230.3 213 57.3
TAR383G0846 Trochodendron aralioides HOM05D002927 ORTHO05D003841 1.8e-58 229.9 213 56.3
Duzib235G0335 Durio zibethinus HOM05D002927 ORTHO05D003841 2.3e-58 229.6 214 57.5
Gorai.009G132500 Gossypium raimondii HOM05D002927 ORTHO05D003841 3.0e-58 229.2 214 56.1
Solyc06g066790.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 3.0e-58 229.2 205 54.1
Gohir.A10G078900 Gossypium hirsutum HOM05D002927 ORTHO05D003841 5.1e-58 228.4 211 57.3
CANSAT56G4360 Cannabis sativa HOM05D002927 ORTHO05D003841 6.7e-58 228.0 212 55.7
Gorai.011G078200 Gossypium raimondii HOM05D002927 ORTHO05D003841 1.1e-57 227.3 211 57.3
Potri.003G056700 Populus trichocarpa HOM05D002927 ORTHO05D003841 1.5e-57 226.9 215 54.4
AUR62016429 Chenopodium quinoa HOM05D002927 ORTHO05D003841 1.9e-57 226.5 207 54.6
Lalb_Chr24g0395741 Lupinus albus HOM05D002927 ORTHO05D003841 1.9e-57 226.5 213 56.3
Gohir.D10G072600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 2.5e-57 226.1 211 56.9
Nitab4.5_0002327g0070 Nicotiana tabacum HOM05D002927 ORTHO05D003841 3.3e-57 225.7 211 53.1
Phvul.005G172700 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 4.3e-57 225.3 212 57.1
ATR0037G015 Amborella trichopoda HOM05D002927 ORTHO05D003841 5.7e-57 224.9 214 56.1
Gohir.A05G127400 Gossypium hirsutum HOM05D002927 ORTHO05D003841 5.7e-57 224.9 214 55.6
TPR.G24164 Trifolium pratense HOM05D002927 ORTHO05D003841 5.7e-57 224.9 214 54.2
FvH4_6g30900 Fragaria vesca HOM05D002927 ORTHO05D003841 9.7e-57 224.2 211 56.4
Eucgr.L02309 Eucalyptus grandis HOM05D002927 ORTHO05D017896 1.3e-56 223.8 214 57.0
RcHm_v2.0_Chr2g0137391 Rosa chinensis HOM05D002927 ORTHO05D003841 1.3e-56 223.8 211 56.9
VMungo1080G1114 Vigna mungo HOM05D002927 ORTHO05D003841 1.3e-56 223.8 211 55.5
Gohir.A02G122600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 1.6e-56 223.4 214 53.7
HanXRQChr16g0501061 Helianthus annuus HOM05D002927 ORTHO05D003841 2.2e-56 223.0 213 55.9
Sed0021699 Sechium edule HOM05D002927 ORTHO05D003841 2.2e-56 223.0 204 56.9
TWI12G0585 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 2.2e-56 223.0 215 56.3
Sabra01G0148600 Salix brachista HOM05D002927 ORTHO05D003841 2.8e-56 222.6 215 54.0
Ah.01g020990 Amaranthus hybridus HOM05D002927 ORTHO05D003841 3.7e-56 222.2 184 58.7
FAN05G2514 Fragaria x ananassa HOM05D002927 ORTHO05D003841 4.8e-56 221.9 211 55.9
AUR62011613 Chenopodium quinoa HOM05D002927 ORTHO05D003841 6.3e-56 221.5 207 53.6
FAN02G2217 Fragaria x ananassa HOM05D002927 ORTHO05D003841 6.3e-56 221.5 211 55.9
FAN14G3898 Fragaria x ananassa HOM05D002927 ORTHO05D003841 8.2e-56 221.1 211 55.9
Potri.001G177700 Populus trichocarpa HOM05D002927 ORTHO05D003841 8.2e-56 221.1 209 54.1
Migut.I00844 Erythranthe guttata HOM05D002927 ORTHO05D003841 1.1e-55 220.7 210 55.2
CDE06G0582 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 1.4e-55 220.3 189 56.6
CDE07G0468 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 1.8e-55 219.9 213 53.5
Medtr4g011890 Medicago truncatula HOM05D002927 ORTHO05D003841 1.8e-55 219.9 213 53.1
MD09G1215200 Malus domestica HOM05D002927 ORTHO05D003841 4.1e-55 218.8 206 57.3
Potri.001G178000 Populus trichocarpa HOM05D002927 ORTHO05D003841 4.1e-55 218.8 209 53.1
Duzib192G1045 Durio zibethinus HOM05D002927 ORTHO05D003841 5.3e-55 218.4 208 54.3
Hund00592 Selenicereus undatus HOM05D002927 ORTHO05D003841 9.0e-55 217.6 224 51.8
Ca_20406_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 1.5e-54 216.9 201 54.7
FAN09G4597 Fragaria x ananassa HOM05D002927 ORTHO05D003841 1.5e-54 216.9 211 55.0
EL10Ac9g21989 Beta vulgaris HOM05D002927 ORTHO05D003841 2.0e-54 216.5 208 52.9
Cc04_g03600 Coffea canephora HOM05D002927 ORTHO05D003841 2.0e-54 216.5 213 52.6
Phvul.010G151600 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 2.0e-54 216.5 214 53.3
VMungo0331G1773 Vigna mungo HOM05D002927 ORTHO05D003841 3.4e-54 215.7 214 53.3
Atru.chr1.3222 Acer truncatum HOM05D002927 ORTHO05D003841 4.5e-54 215.3 216 52.8
Lj9C506T2 Lonicera japonica HOM05D002927 ORTHO05D003841 5.9e-54 214.9 227 52.4
Glyma.13G360900 Glycine max HOM05D002927 ORTHO05D003841 7.7e-54 214.5 214 54.7
Psat7g253400 Pisum sativum HOM05D002927 ORTHO05D003841 1.0e-53 214.2 214 52.8
Sabra03G0032300 Salix brachista HOM05D002927 ORTHO05D003841 1.3e-53 213.8 240 49.6
Aqoxy7G01853 Aquilegia oxysepala HOM05D002927 ORTHO05D003841 1.7e-53 213.4 213 53.1
Lalb_Chr25g0279601 Lupinus albus HOM05D002927 ORTHO05D003841 1.7e-53 213.4 214 53.7
Ciclev10024839m.g Citrus clementina HOM05D002927 ORTHO05D003841 3.8e-53 212.2 212 53.8
Os01g0617500 Oryza sativa ssp. japonica HOM05D002927 ORTHO05D003841 1.1e-52 210.7 215 51.2
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.9e-52 209.9 214 55.1
Lj3g0010300 Lotus japonicus HOM05D002927 ORTHO05D003841 1.6e-51 206.8 208 50.0
Zm00001eb159790 Zea mays HOM05D002927 ORTHO05D003841 2.1e-51 206.5 215 50.2
Nitab4.5_0003885g0030 Nicotiana tabacum HOM05D002927 ORTHO05D003841 1.0e-50 204.1 194 55.7
THA.LOC104808208 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 1.4e-50 203.8 213 50.7
THA.LOC104812472 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 3.0e-50 202.6 215 49.8
Thhalv10018100m.g Eutrema salsugineum HOM05D002927 ORTHO05D003841 3.9e-50 202.2 217 51.6
BcaC08g47587 Brassica carinata HOM05D002927 ORTHO05D003841 5.1e-50 201.8 208 53.4
C06p54110 Brassica napus HOM05D002927 ORTHO05D003841 5.1e-50 201.8 208 53.4
BolC6t40424H Brassica oleracea HOM05D002927 ORTHO05D003841 5.1e-50 201.8 208 53.4
unitig_21.g20350 Utricularia gibba HOM05D002927 ORTHO05D003841 6.7e-50 201.4 177 54.2
Sp5g35400 Schrenkiella parvula HOM05D002927 ORTHO05D003841 8.8e-50 201.1 208 52.9
AL2G41090 Arabidopsis lyrata HOM05D002927 ORTHO05D003841 1.1e-49 200.7 209 53.1
BcaC03g15969 Brassica carinata HOM05D002927 ORTHO05D003841 1.5e-49 200.3 216 52.8
A07p26660 Brassica napus HOM05D002927 ORTHO05D003841 2.0e-49 199.9 213 51.6
C02p37340 Brassica napus HOM05D002927 ORTHO05D003841 2.5e-49 199.5 216 52.3
CARHR074830 Cardamine hirsuta HOM05D002927 ORTHO05D003841 2.5e-49 199.5 182 57.1
BraA02t07350Z Brassica rapa HOM05D002927 ORTHO05D003841 4.3e-49 198.7 216 52.3
BraA07t30309Z Brassica rapa HOM05D002927 ORTHO05D003841 4.3e-49 198.7 212 51.9
BcaB02g07275 Brassica carinata HOM05D002927 ORTHO05D003841 7.4e-49 198.0 182 54.9
BcaC08g45310 Brassica carinata HOM05D002927 ORTHO05D003841 7.4e-49 198.0 181 56.9
A02p23570 Brassica napus HOM05D002927 ORTHO05D003841 7.4e-49 198.0 216 52.3
C06p29140 Brassica napus HOM05D002927 ORTHO05D003841 7.4e-49 198.0 181 56.9
BolC6t38078H Brassica oleracea HOM05D002927 ORTHO05D003841 7.4e-49 198.0 181 56.9
BraA07t32030Z Brassica rapa HOM05D002927 ORTHO05D003841 7.4e-49 198.0 210 49.0
Carub.0002s2716 Capsella rubella HOM05D002927 ORTHO05D003841 1.7e-48 196.8 213 50.2
THA.LOC104813572 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 2.2e-48 196.4 212 47.6
SGA_v2.0_scaffold37G14805 Striga asiatica HOM05D002927 ORTHO05D003841 8.2e-48 194.5 213 49.8
A07p45260 Brassica napus HOM05D002927 ORTHO05D003841 1.1e-47 194.1 212 50.5
AT1G80410 Arabidopsis thaliana HOM05D002927 ORTHO05D003841 2.0e-46 189.9 208 50.5
TPR.G37235 Trifolium pratense HOM05D002927 ORTHO05D003841 1.3e-45 187.2 142 62.0
Lsat_1_v5_gn_5_129901 Lactuca sativa HOM05D002927 ORTHO05D003841 2.2e-45 186.4 144 65.3
Aa31LG4G680 Aethionema arabicum HOM05D002927 ORTHO05D003841 5.5e-44 181.8 210 48.6
HPP92_003639 Vanilla planifolia HOM05D002927 ORTHO05D003841 2.1e-43 179.9 212 48.1
SHI09679 Sapria himalayana HOM05D002927 ORTHO05D003841 2.2e-40 169.9 137 62.0
AagrBONN_evm.TU.Sc2ySwM_228.5799 Anthoceros agrestis HOM05D002927 ORTHO05D003841 2.4e-39 166.4 173 49.1
AagrBONN_evm.TU.Sc2ySwM_228.5803 Anthoceros agrestis HOM05D002927 ORTHO05D003841 2.4e-39 166.4 173 49.1
Duzib094G0001 Durio zibethinus HOM05D002927 ORTHO05D003841 2.9e-37 159.5 154 51.9
Duzib262G0001 Durio zibethinus HOM05D002927 ORTHO05D003841 3.8e-37 159.1 147 54.4
SEGI_19478 Sequoiadendron giganteum HOM05D002927 ORTHO05D017896 5.0e-37 158.7 156 53.2
AUR62011611 Chenopodium quinoa HOM05D000021 ORTHO05D000010 3.2e-36 156.0 142 55.6
Mapoly0079s0051 Marchantia polymorpha HOM05D002927 ORTHO05D003841 2.7e-35 152.9 168 47.6
BcaC03g15973 Brassica carinata HOM05D002927 ORTHO05D003841 4.7e-35 152.1 159 55.3
BcaC03g15971 Brassica carinata HOM05D002927 ORTHO05D003841 1.0e-34 151.0 178 52.2
Gorai.002G058200 Gossypium raimondii HOM05D002927 ORTHO05D003841 4.0e-34 149.1 124 57.3
Pp3c4_20560 Physcomitrium patens HOM05D002927 ORTHO05D003841 4.0e-34 149.1 167 46.1
Pp3c3_24080 Physcomitrium patens HOM05D002927 ORTHO05D003841 6.7e-34 148.3 176 44.3
Pp3c10_20750 Physcomitrium patens HOM05D002927 ORTHO05D003841 1.5e-33 147.1 187 44.4
Dinv38060 Davidia involucrata HOM05D002927 ORTHO05D003841 7.0e-31 138.3 91 71.4
SMO364G0531 Selaginella moellendorffii HOM05D002927 ORTHO05D003841 9.1e-31 137.9 169 42.0
Nn8g39281 Nelumbo nucifera HOM05D002927 ORTHO05D003841 2.9e-29 132.9 101 60.4
Duzib114G0746 Durio zibethinus HOM05D002927 ORTHO05D003841 8.5e-29 131.3 105 59.0
Eucgr.L01619 Eucalyptus grandis HOM05D002927 ORTHO05D017896 2.5e-28 129.8 139 53.2
SEGI_10963 Sequoiadendron giganteum HOM05D002927 ORTHO05D017896 4.7e-27 125.6 117 56.4
Duzib063G0001 Durio zibethinus HOM05D002927 ORTHO05D003841 2.0e-25 120.2 113 54.0
CBR_g51323 Chara braunii HOM05D002927 ORTHO05D003841 4.4e-25 119.0 188 35.6
Lsat_1_v5_gn_5_148700 Lactuca sativa HOM05D002927 ORTHO05D017896 1.0e-21 107.8 87 62.1
Duzib141G0005 Durio zibethinus HOM05D002927 ORTHO05D003841 6.1e-19 98.6 78 59.0
PSO724G0063 Papaver somniferum HOM05D002927 ORTHO05D003841 6.8e-18 95.1 157 37.6
Eucgr.L03302 Eucalyptus grandis HOM05D002927 ORTHO05D003841 8.6e-13 78.2 59 62.7
TPR.G18924 Trifolium pratense HOM05D002927 ORTHO05D017896 2.8e-11 73.2 84 47.6
Sc12g0009150 Simmondsia chinensis HOM05D002927 ORTHO05D003841 6.1e-11 72.0 50 64.0
Dinv38061 Davidia involucrata HOM05D002927 ORTHO05D017896 1.8e-10 70.5 73 54.8
Lsat_1_v5_gn_7_104540 Lactuca sativa HOM05D003066 ORTHO05D004162 3.4e-09 66.2 52 59.6
Lj6g0002429 Lotus japonicus HOM05D000669 ORTHO05D015433 3.4e-09 66.2 48 64.6


User provided reference genes

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