Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 0.0e+00 1475.3 763 100.0
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.8e-137 494.2 761 41.5
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.6e-136 490.3 720 41.7
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 5.8e-136 489.2 746 41.4
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 7.6e-136 488.8 739 41.8
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 9.9e-136 488.4 720 41.5
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.0e-132 478.4 730 41.1
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 5.1e-132 476.1 725 41.0
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 2.5e-131 473.8 746 40.2
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 9.6e-131 471.9 746 39.9
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.4e-129 468.0 715 41.0
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.6e-128 463.8 722 40.4
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 9.9e-128 461.8 717 40.7
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 2.2e-127 460.7 754 39.1
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 3.8e-127 459.9 746 39.4
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 9.3e-126 455.3 727 39.2
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 4.6e-125 453.0 714 39.9
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.0e-124 451.8 728 38.5
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.7e-124 451.1 715 40.0
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 3.0e-124 450.3 734 39.9
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 3.9e-124 449.9 718 38.7
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 3.9e-124 449.9 732 39.6
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.1e-124 449.5 758 38.5
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 5.1e-124 449.5 746 38.7
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 8.7e-124 448.7 718 40.1
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.5e-123 448.0 350 66.0
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.5e-123 448.0 680 40.9
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 3.3e-123 446.8 720 39.7
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 3.3e-123 446.8 743 39.3
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 3.3e-123 446.8 748 39.0
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 5.6e-123 446.0 743 39.6
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.1e-122 444.1 714 39.6
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.8e-122 443.7 720 39.4
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.6e-122 443.4 761 38.5
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 1.1e-121 441.8 715 38.5
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 1.1e-121 441.8 749 39.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.1e-121 441.8 736 37.2
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 2.4e-121 440.7 721 38.0
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 3.1e-121 440.3 715 38.5
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 4.0e-121 439.9 714 37.7
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.2e-120 438.3 715 38.2
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 1.2e-120 438.3 733 39.3
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 3.4e-120 436.8 725 38.9
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 5.8e-120 436.0 714 39.4
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 7.6e-120 435.6 715 38.0
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.7e-119 434.5 715 37.2
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 1.7e-119 434.5 717 38.1
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 2.2e-119 434.1 754 38.1
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.4e-118 431.4 715 38.7
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.9e-118 431.0 728 39.0
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 2.4e-118 430.6 347 61.4
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 2.1e-117 427.6 686 39.5
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.1e-117 427.6 716 38.4
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 3.5e-117 426.8 714 38.0
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.9e-116 423.3 728 37.5
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 1.1e-115 421.8 700 36.7
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.3e-115 420.2 751 36.9
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.1e-114 417.5 728 37.8
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 3.1e-113 413.7 720 37.5
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 3.1e-113 413.7 719 37.3
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.0e-111 408.7 719 37.0
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 2.2e-111 407.5 745 36.0
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 3.8e-111 406.8 720 36.7
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 6.5e-111 406.0 747 37.2
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 4.2e-110 403.3 717 37.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.6e-109 401.4 720 36.9
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.6e-109 401.4 350 58.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 5.1e-108 396.4 312 63.5
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 3.3e-107 393.7 344 57.8
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.3e-107 393.7 757 36.1
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.6e-106 391.3 715 36.8
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 4.8e-106 389.8 719 36.4
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 6.3e-106 389.4 710 36.2
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 8.2e-106 389.0 715 36.2
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 3.1e-105 387.1 718 36.5
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 6.9e-105 386.0 712 35.8
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 5.9e-104 382.9 719 36.4
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.0e-103 382.1 356 60.4
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 1.7e-103 381.3 353 55.2
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 2.2e-103 380.9 719 36.4
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 3.2e-102 377.1 719 36.0
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.2e-101 375.2 310 63.2
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.1e-99 368.6 721 35.1
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.5e-99 368.2 750 34.8
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 5.7e-99 366.3 311 61.1
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 4.8e-98 363.2 731 34.1
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 3.4e-96 357.1 733 34.1
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.7e-95 354.8 315 57.8
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 5.0e-87 326.6 312 55.1
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 2.1e-85 321.2 311 54.3
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 3.7e-82 310.5 662 34.6
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.4e-81 308.5 347 46.4
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 2.4e-81 307.8 291 52.6
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.1e-81 307.4 318 54.1
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 1.2e-80 305.4 292 50.7
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 5.5e-78 296.6 616 33.6
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 6.1e-77 293.1 589 32.8
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.8e-76 291.6 590 33.1
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 4.1e-73 280.4 584 32.5
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.8e-66 257.7 216 63.9
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.8e-65 255.0 310 44.2
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.0e-63 249.2 232 56.0
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 2.9e-63 247.7 351 43.6
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 4.2e-62 243.8 213 58.2
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.3e-58 232.3 209 60.8
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 9.2e-57 226.1 296 45.3
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.2e-56 225.7 222 54.1
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 5.6e-54 216.9 518 31.7
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 5.7e-51 206.8 318 42.5
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 1.6e-45 188.7 245 44.1
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.3e-44 184.9 173 57.2
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 5.2e-44 183.7 132 64.4
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 8.1e-37 159.8 140 61.4
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 2.9e-34 151.4 133 60.2
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.3e-31 142.5 108 63.9
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.9e-30 138.7 84 76.2
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 7.3e-30 136.7 129 57.4
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 1.1e-28 132.9 84 76.2
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.4e-25 121.7 103 56.3
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.2e-18 98.6 98 55.1
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 1.2e-16 92.8 287 27.9
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 1.9e-14 85.5 297 24.9
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.8e-13 81.6 293 27.0
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.2e-11 76.3 51 74.5
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 3.2e-09 68.2 62 58.1
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 2.5e-06 58.5 325 23.4


User provided reference genes

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