Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 3.5e-80 301.6 157 100.0
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 1.1e-65 253.4 146 90.4
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 8.7e-55 217.2 127 85.0
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.5e-54 216.5 127 85.8
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 1.5e-54 216.5 132 83.3
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.9e-54 216.1 124 86.3
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 1.9e-54 216.1 127 83.5
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 1.9e-54 216.1 127 83.5
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 1.9e-54 216.1 127 83.5
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 4.3e-54 214.9 128 82.8
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 4.3e-54 214.9 128 83.6
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 5.7e-54 214.5 128 85.2
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.2e-53 212.6 128 82.8
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 2.8e-53 212.2 123 83.7
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.7e-53 211.8 128 82.0
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 6.3e-53 211.1 127 81.1
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 8.2e-53 210.7 120 88.3
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 8.2e-53 210.7 128 82.0
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 1.1e-52 210.3 128 82.0
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 1.1e-52 210.3 128 80.5
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 1.8e-52 209.5 128 80.5
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 4.1e-52 208.4 123 82.9
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 4.1e-52 208.4 128 81.2
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.1e-52 208.4 128 79.7
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.1e-52 208.4 128 79.7
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.1e-52 208.4 128 79.7
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 4.1e-52 208.4 124 83.1
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 4.1e-52 208.4 127 85.0
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 4.1e-52 208.4 128 79.7
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 4.1e-52 208.4 128 81.2
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 5.3e-52 208.0 123 81.3
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 78.9
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 79.7
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 79.7
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 79.7
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 79.7
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 80.5
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 6.9e-52 207.6 128 82.0
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 9.1e-52 207.2 128 78.9
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.2e-51 206.8 128 80.5
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 1.5e-51 206.5 128 79.7
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 1.5e-51 206.5 129 79.8
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 2.0e-51 206.1 128 79.7
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 2.0e-51 206.1 120 82.5
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 2.6e-51 205.7 128 79.7
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 2.6e-51 205.7 128 79.7
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 3.4e-51 205.3 128 78.9
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 5.9e-51 204.5 128 81.2
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 5.9e-51 204.5 128 80.5
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 7.7e-51 204.1 121 83.5
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 1.0e-50 203.8 126 79.4
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 1.7e-50 203.0 126 82.5
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.7e-50 203.0 129 80.6
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 2.9e-50 202.2 125 79.2
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 3.8e-50 201.8 123 81.3
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 6.5e-50 201.1 127 78.7
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 8.5e-50 200.7 132 78.0
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.1e-49 200.3 124 79.8
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 1.1e-49 200.3 123 82.9
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 1.1e-49 200.3 123 82.9
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 2.5e-49 199.1 128 79.7
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 2.5e-49 199.1 128 79.7
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 2.5e-49 199.1 128 79.7
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 2.5e-49 199.1 128 79.7
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 2.5e-49 199.1 128 79.7
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 3.2e-49 198.7 128 79.7
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 3.2e-49 198.7 120 80.8
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 3.2e-49 198.7 128 79.7
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 4.2e-49 198.4 128 78.9
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 4.2e-49 198.4 128 78.9
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 5.5e-49 198.0 128 78.9
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 5.5e-49 198.0 128 78.9
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 5.5e-49 198.0 128 78.9
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 5.5e-49 198.0 128 79.7
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 7.2e-49 197.6 124 79.0
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 9.4e-49 197.2 114 86.8
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 1.2e-48 196.8 128 74.2
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.2e-48 196.8 128 78.9
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.6e-48 196.4 128 78.1
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 1.6e-48 196.4 125 78.4
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 2.1e-48 196.1 114 86.0
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.7e-48 195.7 114 84.2
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 2.7e-48 195.7 124 77.4
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 6.1e-48 194.5 120 77.5
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 6.1e-48 194.5 120 78.3
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 1.0e-47 193.7 128 77.3
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 1.0e-47 193.7 128 76.6
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 3.0e-47 192.2 150 70.0
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 3.9e-47 191.8 125 78.4
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 3.9e-47 191.8 125 78.4
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 3.9e-47 191.8 129 76.0
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 6.7e-47 191.0 128 77.3
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 6.7e-47 191.0 135 71.1
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 1.5e-46 189.9 118 78.0
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 2.6e-46 189.1 126 73.8
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 3.3e-46 188.7 131 73.3
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 4.4e-46 188.3 150 66.0
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.4e-44 182.6 134 73.1
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 3.1e-44 182.2 118 72.9
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 4.1e-44 181.8 120 71.7
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 9.1e-44 180.6 120 74.2
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 5.9e-43 177.9 125 71.2
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 5.9e-43 177.9 122 68.9
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 7.7e-43 177.6 110 81.8
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.2e-42 176.0 110 80.0
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 3.8e-42 175.3 110 81.8
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 6.5e-42 174.5 109 79.8
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 8.5e-42 174.1 128 71.1
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.4e-41 173.3 109 78.9
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 4.2e-41 171.8 110 79.1
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 2.7e-40 169.1 97 87.6
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 7.9e-40 167.5 126 70.6
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 6.7e-39 164.5 109 78.9
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 9.7e-38 160.6 102 79.4
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 2.8e-37 159.1 110 75.5
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 1.1e-36 157.1 124 65.3
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 1.1e-36 157.1 117 64.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 7.0e-36 154.5 104 71.2
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 1.2e-35 153.7 132 62.9
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 7.7e-35 151.0 101 73.3
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 5.5e-33 144.8 127 62.2
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 2.1e-32 142.9 116 70.7
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 4.7e-32 141.7 181 48.1
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 8.2e-29 131.0 76 85.5
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 3.1e-28 129.0 75 85.3
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 5.9e-27 124.8 75 86.7
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 2.2e-26 122.9 75 84.0
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 3.8e-26 122.1 96 59.4
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 5.5e-25 118.2 120 55.0
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 7.2e-25 117.9 71 80.3
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 2.1e-24 116.3 77 76.6
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 8.0e-24 114.4 75 80.0
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 8.0e-24 114.4 98 61.2
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 4.0e-23 112.1 114 48.2
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 6.8e-23 111.3 97 60.8
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.8e-20 103.2 121 52.9
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 7.7e-19 97.8 56 83.9
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 1.3e-18 97.1 55 83.6
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 5.0e-18 95.1 120 40.8
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 4.2e-17 92.0 53 81.1
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 8.0e-16 87.8 53 77.4
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 1.0e-15 87.4 60 78.3
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 4.0e-15 85.5 55 78.2
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 5.2e-15 85.1 51 80.4
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 3.4e-14 82.4 51 78.4
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 4.4e-14 82.0 107 43.9
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.8e-13 79.3 48 72.9
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.8e-13 79.3 77 54.5
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 4.9e-13 78.6 45 80.0
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.7e-10 70.1 161 34.2
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 1.6e-08 63.5 120 35.8
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.2e-06 57.4 55 58.2
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 2.6e-06 56.2 41 68.3


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