Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 0.0e+00 1110.5 542 100.0
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.2e-252 876.3 563 77.3
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 2.2e-246 855.5 543 76.4
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.2e-246 855.5 543 77.3
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 3.7e-246 854.7 543 77.3
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 4.9e-246 854.4 552 77.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.1e-245 853.2 543 76.8
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.9e-245 852.4 542 76.4
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 7.0e-245 850.5 543 77.2
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 2.7e-244 848.6 543 76.2
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 3.5e-244 848.2 543 76.8
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 2.3e-243 845.5 543 76.8
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 6.6e-243 844.0 543 77.2
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.9e-242 842.4 544 75.7
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 7.3e-242 840.5 536 75.7
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.2e-241 839.7 536 75.4
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 6.2e-241 837.4 543 75.3
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 1.4e-240 836.3 538 75.5
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 2.3e-240 835.5 546 75.3
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.6e-239 832.0 544 75.7
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 4.4e-239 831.2 543 76.1
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.1e-237 826.6 543 74.8
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.4e-237 826.2 538 76.2
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 2.4e-237 825.5 541 75.6
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 1.2e-236 823.2 543 75.1
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 1.7e-235 819.3 543 74.6
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 7.3e-234 813.9 546 74.2
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 3.6e-233 811.6 622 67.2
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 3.6e-233 811.6 521 77.0
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 4.4e-231 804.7 545 73.8
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.3e-230 803.1 543 74.0
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.9e-229 799.3 544 74.1
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.6e-225 786.2 543 72.2
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 2.0e-223 779.2 551 72.1
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 7.6e-223 777.3 578 69.2
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 5.4e-221 771.2 544 71.5
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 7.1e-221 770.8 544 70.2
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 7.1e-221 770.8 545 71.6
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 7.8e-220 767.3 545 71.7
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.3e-219 766.5 542 71.8
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.3e-219 766.5 545 71.6
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 2.3e-219 765.8 545 71.7
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 5.1e-219 764.6 536 70.1
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.6e-217 759.6 493 74.0
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 2.1e-217 759.2 544 69.7
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 3.1e-216 755.4 546 69.8
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.5e-215 753.1 536 71.1
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 3.4e-215 751.9 544 70.4
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 5.8e-215 751.1 546 70.0
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 7.6e-215 750.7 540 69.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.3e-214 750.0 543 70.0
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.3e-214 750.0 544 67.8
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 2.2e-214 749.2 560 67.5
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.4e-213 746.5 545 70.1
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 4.2e-213 745.0 546 69.2
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 5.4e-213 744.6 544 69.3
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 7.1e-213 744.2 546 69.0
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 9.3e-213 743.8 546 69.0
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 6.0e-212 741.1 545 70.1
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.0e-211 740.3 551 69.0
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.0e-211 740.3 550 69.6
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 5.1e-211 738.0 545 70.5
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 7.3e-210 734.2 543 68.5
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.3e-209 733.4 545 68.4
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.3e-209 733.4 551 68.1
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 6.2e-209 731.1 544 68.6
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 6.2e-209 731.1 548 69.0
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 2.4e-208 729.2 621 62.5
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 6.9e-208 727.6 468 76.5
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 3.8e-206 721.8 536 66.0
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 4.6e-204 714.9 582 62.5
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 4.6e-204 714.9 582 62.5
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 1.9e-202 709.5 541 64.7
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 1.1e-200 703.7 546 65.0
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 6.9e-200 701.0 541 64.1
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 3.4e-199 698.7 474 73.2
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 4.6e-196 688.3 543 65.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.5e-191 673.3 497 66.4
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 3.8e-190 668.7 495 66.7
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 5.0e-190 668.3 613 59.2
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 2.5e-189 666.0 445 75.5
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 2.2e-185 652.9 656 53.8
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 4.1e-184 648.7 606 59.2
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.3e-182 643.7 545 63.1
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 1.4e-179 633.6 450 71.8
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 1.2e-175 620.5 466 67.8
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 4.2e-173 612.1 416 73.3
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 7.2e-165 584.7 439 66.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 6.7e-163 578.2 543 56.7
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 1.3e-158 563.9 543 55.2
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.7e-158 563.5 547 52.1
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 2.3e-155 553.1 496 58.7
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.1e-152 544.3 350 76.9
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.1e-140 503.4 352 71.9
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 8.3e-137 491.5 515 52.8
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 3.0e-134 483.0 311 76.8
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.2e-132 477.6 307 76.2
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 8.6e-126 454.9 881 34.5
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 5.6e-125 452.2 967 33.0
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 2.8e-124 449.9 288 76.0
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.0e-123 446.0 843 35.5
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 3.2e-120 436.4 955 32.7
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.1e-119 433.7 888 32.9
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.3e-118 431.0 377 60.2
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 3.6e-116 422.9 247 82.6
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.5e-109 400.2 313 66.5
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.8e-103 378.6 311 62.1
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.3e-102 377.1 234 78.2
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 7.6e-90 335.5 263 64.3
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 2.3e-78 297.4 196 76.5
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 2.8e-68 263.8 286 50.3
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 8.2e-68 262.3 308 49.7
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 3.8e-65 253.4 170 74.7
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.7e-36 157.1 129 63.6
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 3.2e-32 144.1 793 22.8
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 1.2e-26 125.6 201 41.8
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 8.0e-23 112.8 103 55.3
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 8.3e-20 102.8 73 69.9
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.1e-19 102.4 252 26.6
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 3.5e-18 97.4 106 51.9
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.0e-13 81.6 67 59.7
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.6e-13 81.3 334 24.0
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 9.2e-11 72.8 51 76.5
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 1.1e-06 59.3 45 62.2
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.8e-06 58.5 50 62.0


User provided reference genes

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