Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019852 Daucus carota HOM05D000742 ORTHO05D176806 1.3e-106 389.8 204 100.0
DCAR_014071 Daucus carota HOM05D000742 ORTHO05D178383 4.3e-30 135.6 86 84.9
DCAR_008239 Daucus carota HOM05D000742 ORTHO05D000924 1.2e-27 127.5 86 80.2
DCAR_029483 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-25 119.4 86 79.1
DCAR_025112 Daucus carota HOM05D000742 ORTHO05D176450 1.1e-20 104.4 70 78.6
DCAR_030192 Daucus carota HOM05D000742 ORTHO05D177254 1.1e-20 104.4 70 78.6
Nn1g01981 Nelumbo nucifera HOM05D000742 ORTHO05D000924 1.0e-10 71.2 124 39.5
A03p50660 Brassica napus HOM05D000742 ORTHO05D000924 1.3e-10 70.9 158 35.4
BraA03t14158Z Brassica rapa HOM05D000742 ORTHO05D000924 1.3e-10 70.9 155 35.5
Eucgr.E00244 Eucalyptus grandis HOM05D000742 ORTHO05D000924 1.3e-10 70.9 168 34.5
Sp7g16390 Schrenkiella parvula HOM05D000742 ORTHO05D000924 1.3e-10 70.9 84 50.0
COL.COLO4_16965 Corchorus olitorius HOM05D000742 ORTHO05D000924 1.7e-10 70.5 167 35.3
AL7G36850 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 2.2e-10 70.1 106 45.3
Dinv28988 Davidia involucrata HOM05D000742 ORTHO05D000924 2.2e-10 70.1 97 46.4
AT4G17720 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 2.9e-10 69.7 153 35.3
Carub.0007s2364 Capsella rubella HOM05D000742 ORTHO05D000924 2.9e-10 69.7 106 44.3
Actinidia03353 Actinidia chinensis HOM05D000742 ORTHO05D000924 5.0e-10 68.9 163 35.6
Aa31LG6G470 Aethionema arabicum HOM05D000742 ORTHO05D000924 6.5e-10 68.6 82 48.8
BcaNung00064 Brassica carinata HOM05D000742 ORTHO05D000924 6.5e-10 68.6 116 42.2
Potri.001G138400 Populus trichocarpa HOM05D000742 ORTHO05D000924 8.5e-10 68.2 104 44.2
Sabra01G0107200 Salix brachista HOM05D000742 ORTHO05D000924 8.5e-10 68.2 78 51.3
CARHR224440 Cardamine hirsuta HOM05D000742 ORTHO05D000924 1.1e-09 67.8 106 42.5
Eucgr.E02851 Eucalyptus grandis HOM05D000742 ORTHO05D000924 1.1e-09 67.8 168 33.9
BraA01t00923Z Brassica rapa HOM05D000742 ORTHO05D000924 1.5e-09 67.4 156 33.3
Peaxi162Scf00170g00921 Petunia axillaris HOM05D000742 ORTHO05D000924 1.5e-09 67.4 151 34.4
Actinidia25989 Actinidia chinensis HOM05D000742 ORTHO05D000924 1.9e-09 67.0 157 38.2
Manes.17G010500 Manihot esculenta HOM05D000742 ORTHO05D000924 1.9e-09 67.0 107 43.0
BcaC09g51615 Brassica carinata HOM05D000742 ORTHO05D000924 2.5e-09 66.6 82 48.8
A01p09790 Brassica napus HOM05D000742 ORTHO05D000924 2.5e-09 66.6 82 48.8
C01p11420 Brassica napus HOM05D000742 ORTHO05D000924 2.5e-09 66.6 82 48.8
BolC1t01111H Brassica oleracea HOM05D000742 ORTHO05D000924 2.5e-09 66.6 82 48.8
Sabra03G0064300 Salix brachista HOM05D000742 ORTHO05D000924 3.2e-09 66.2 78 50.0
Duzib084G0106 Durio zibethinus HOM05D000742 ORTHO05D000924 5.5e-09 65.5 79 49.4
Gohir.D03G175200 Gossypium hirsutum HOM05D000742 ORTHO05D000924 1.6e-08 63.9 164 31.7
Nn3g19410 Nelumbo nucifera HOM05D000742 ORTHO05D000924 1.6e-08 63.9 165 35.2
Sopen08g025110 Solanum pennellii HOM05D000742 ORTHO05D000924 1.6e-08 63.9 159 31.4
Aa31sc182G20 Aethionema arabicum HOM05D000742 ORTHO05D000924 2.1e-08 63.5 77 45.5
Ciclev10016191m.g Citrus clementina HOM05D000742 ORTHO05D000924 2.1e-08 63.5 104 40.4
Gohir.A03G000044 Gossypium hirsutum HOM05D000742 ORTHO05D000924 2.1e-08 63.5 79 45.6
Lalb_Chr09g0325561 Lupinus albus HOM05D000742 ORTHO05D000924 2.1e-08 63.5 79 48.1
Atru.chr6.1630 Acer truncatum HOM05D000742 ORTHO05D000924 2.7e-08 63.2 91 45.1
AT5G46870 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 2.7e-08 63.2 75 49.3
SHI04345 Sapria himalayana HOM05D000742 ORTHO05D000924 2.7e-08 63.2 90 44.4
Gorai.003G184200 Gossypium raimondii HOM05D000742 ORTHO05D000924 3.6e-08 62.8 164 31.7
Solyc08g076530.3 Solanum lycopersicum HOM05D000742 ORTHO05D000924 3.6e-08 62.8 156 31.4
Cc08_g03430 Coffea canephora HOM05D000742 ORTHO05D000924 4.7e-08 62.4 104 43.3
PGSC0003DMG400014809 Solanum tuberosum HOM05D000742 ORTHO05D000924 4.7e-08 62.4 156 31.4
unitig_52.g17201 Utricularia gibba HOM05D000742 ORTHO05D000924 4.7e-08 62.4 97 41.2
Nn4g24464 Nelumbo nucifera HOM05D000742 ORTHO05D000924 6.1e-08 62.0 114 40.4
Nitab4.5_0000529g0020 Nicotiana tabacum HOM05D000742 ORTHO05D000924 6.1e-08 62.0 151 33.1
TAR374G1002 Trochodendron aralioides HOM05D000742 ORTHO05D000924 6.1e-08 62.0 124 37.9
Thecc.03G307700 Theobroma cacao HOM05D000742 ORTHO05D000924 8.0e-08 61.6 79 48.1
C07p49010 Brassica napus HOM05D000742 ORTHO05D000924 1.0e-07 61.2 144 34.0
BolC7t45409H Brassica oleracea HOM05D000742 ORTHO05D000924 1.0e-07 61.2 144 34.0
Glyma.09G206900 Glycine max HOM05D000742 ORTHO05D000924 1.0e-07 61.2 85 45.9
Psat4g004520 Pisum sativum HOM05D000742 ORTHO05D000924 1.0e-07 61.2 163 31.3
AL8G11430 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 1.4e-07 60.8 75 46.7
MSTRG.1997 Avicennia marina HOM05D000742 ORTHO05D000924 1.4e-07 60.8 163 31.3
Duzib177G0694 Durio zibethinus HOM05D000742 ORTHO05D000924 1.4e-07 60.8 77 49.4
Duzib205G0173 Durio zibethinus HOM05D000742 ORTHO05D000924 1.4e-07 60.8 79 46.8
Lsat_1_v5_gn_3_19600 Lactuca sativa HOM05D000742 ORTHO05D000924 1.4e-07 60.8 145 34.5
PGR042G0913 Punica granatum HOM05D000742 ORTHO05D000924 1.4e-07 60.8 76 48.7
GSVIVG01013098001 Vitis vinifera HOM05D000742 ORTHO05D000924 1.4e-07 60.8 79 46.8
Zm00001eb055110 Zea mays HOM05D000742 ORTHO05D000924 1.4e-07 60.8 93 40.9
Aqoxy4G01634 Aquilegia oxysepala HOM05D025364 ORTHO05D000924 1.8e-07 60.5 85 44.7
ECA246G1529 Erigeron canadensis HOM05D000742 ORTHO05D000924 1.8e-07 60.5 142 35.9
Sed0012917 Sechium edule HOM05D000742 ORTHO05D000924 1.8e-07 60.5 104 41.3
unitig_699.g19790 Utricularia gibba HOM05D000742 ORTHO05D000924 1.8e-07 60.5 97 40.2
Cc11_g06570 Coffea canephora HOM05D000742 ORTHO05D000924 2.3e-07 60.1 78 48.7
Phvul.011G019600 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 2.3e-07 60.1 167 31.1
TAR636G2913 Trochodendron aralioides HOM05D000742 ORTHO05D000924 2.3e-07 60.1 97 44.3
GSVIVG01024381001 Vitis vinifera HOM05D000742 ORTHO05D000924 2.3e-07 60.1 124 38.7
Manes.09G125200 Manihot esculenta HOM05D000742 ORTHO05D000924 3.0e-07 59.7 171 30.4
Medtr5g029640 Medicago truncatula HOM05D000742 ORTHO05D000924 3.0e-07 59.7 85 45.9
Duzib251G0005 Durio zibethinus HOM05D000742 ORTHO05D000924 4.0e-07 59.3 167 28.1
Thhalv10001235m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 5.2e-07 58.9 75 45.3
Gohir.A02G141000 Gossypium hirsutum HOM05D000742 ORTHO05D000924 5.2e-07 58.9 153 32.0
Gohir.D03G051500 Gossypium hirsutum HOM05D000742 ORTHO05D000924 5.2e-07 58.9 149 31.5
Gorai.003G053100 Gossypium raimondii HOM05D000742 ORTHO05D000924 5.2e-07 58.9 153 32.0
Lj6C734G7 Lonicera japonica HOM05D000742 ORTHO05D000924 6.8e-07 58.5 88 43.2
Oeu028871.1 Olea europaea HOM05D000742 ORTHO05D000924 6.8e-07 58.5 167 30.5
Os04g0594400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 6.8e-07 58.5 89 42.7
Thecc.05G215300 Theobroma cacao HOM05D000742 ORTHO05D000924 6.8e-07 58.5 77 48.1
Duzib128G1876 Durio zibethinus HOM05D000742 ORTHO05D000924 8.8e-07 58.2 77 48.1
Aqoxy5G02984 Aquilegia oxysepala HOM05D000742 ORTHO05D000924 1.2e-06 57.8 73 49.3
Ca_17249_v3 Cicer arietinum L. HOM05D000742 ORTHO05D000924 1.2e-06 57.8 123 33.3
Eucgr.E00239 Eucalyptus grandis HOM05D000742 ORTHO05D000924 1.2e-06 57.8 169 32.5
VMungo1215G2472 Vigna mungo HOM05D000742 ORTHO05D000924 1.2e-06 57.8 87 42.5
CANSAT78G2418 Cannabis sativa HOM05D000742 ORTHO05D000924 1.5e-06 57.4 93 39.8
Dinv01892 Davidia involucrata HOM05D000742 ORTHO05D000924 1.5e-06 57.4 89 42.7
Nitab4.5_0000021g0620 Nicotiana tabacum HOM05D000742 ORTHO05D000924 1.5e-06 57.4 104 41.3
Nitab4.5_0001762g0030 Nicotiana tabacum HOM05D000742 ORTHO05D000924 1.5e-06 57.4 104 41.3
Os03g0713600 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 1.5e-06 57.4 88 39.8
Potri.003G095400 Populus trichocarpa HOM05D000742 ORTHO05D000924 1.5e-06 57.4 78 47.4
SGA_v2.0_scaffold20G09264 Striga asiatica HOM05D000742 ORTHO05D000924 1.5e-06 57.4 81 43.2
SGA_v2.0_scaffold44G16899 Striga asiatica HOM05D000742 ORTHO05D000924 1.5e-06 57.4 92 41.3
MSTRG.13746 Avicennia marina HOM05D000742 ORTHO05D000924 2.0e-06 57.0 91 40.7
CSS0044634 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 2.0e-06 57.0 124 37.1
CiPaw.05G187700 Carya illinoinensis HOM05D000742 ORTHO05D000924 2.0e-06 57.0 123 33.3
Lj5g0000224 Lotus japonicus HOM05D000742 ORTHO05D000924 2.0e-06 57.0 79 41.8
Nn3g18426 Nelumbo nucifera HOM05D000742 ORTHO05D000924 2.0e-06 57.0 167 29.9
Thhalv10025761m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 2.6e-06 56.6 82 43.9
Gohir.A13G156500 Gossypium hirsutum HOM05D000742 ORTHO05D000924 2.6e-06 56.6 89 38.2
Gohir.D13G161300 Gossypium hirsutum HOM05D000742 ORTHO05D000924 2.6e-06 56.6 89 38.2
Gorai.013G183100 Gossypium raimondii HOM05D000742 ORTHO05D000924 2.6e-06 56.6 89 38.2
Hma1.2p1_1538F.1_g289580 Hydrangea macrophylla HOM05D000742 ORTHO05D000924 2.6e-06 56.6 90 43.3
HPP92_024771 Vanilla planifolia HOM05D000742 ORTHO05D000924 2.6e-06 56.6 167 28.1
CiPaw.11G097100 Carya illinoinensis HOM05D000742 ORTHO05D000924 3.4e-06 56.2 97 39.2
COL.COLO4_15225 Corchorus olitorius HOM05D000742 ORTHO05D000924 3.4e-06 56.2 77 45.5
GSVIVG01011624001 Vitis vinifera HOM05D000742 ORTHO05D000924 3.4e-06 56.2 167 27.5
Zm00001eb036540 Zea mays HOM05D000742 ORTHO05D000924 3.4e-06 56.2 89 40.4
Zm00001eb429380 Zea mays HOM05D000742 ORTHO05D000924 3.4e-06 56.2 89 40.4
CSS0025586 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 4.4e-06 55.8 79 45.6
CSS0034082 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 4.4e-06 55.8 79 45.6
Cpa.g.sc43.92 Carica papaya HOM05D000742 ORTHO05D000924 4.4e-06 55.8 122 36.1
DCAR_008240 Daucus carota HOM05D000742 ORTHO05D000924 4.4e-06 55.8 49 59.2
Lj4g0001118 Lotus japonicus HOM05D000742 ORTHO05D000924 4.4e-06 55.8 97 39.2
Sc19g0000120 Simmondsia chinensis HOM05D000742 ORTHO05D000924 4.4e-06 55.8 89 43.8
TPR.G8079 Trifolium pratense HOM05D000742 ORTHO05D000924 4.4e-06 55.8 79 41.8
Zm00001eb072190 Zea mays HOM05D000742 ORTHO05D000924 4.4e-06 55.8 89 40.4
Aqoxy3G02213 Aquilegia oxysepala HOM05D000742 ORTHO05D000924 5.7e-06 55.5 51 58.8
Migut.E00777 Erythranthe guttata HOM05D000742 ORTHO05D000924 5.7e-06 55.5 104 35.6
Zm00001eb430040 Zea mays HOM05D000742 ORTHO05D000924 5.7e-06 55.5 89 39.3
Aqoxy3G04060 Aquilegia oxysepala HOM05D000742 ORTHO05D000924 7.5e-06 55.1 103 36.9
EL10Ac3g05064 Beta vulgaris HOM05D000742 ORTHO05D000924 9.8e-06 54.7 94 39.4
Ciclev10021732m.g Citrus clementina HOM05D000742 ORTHO05D000924 9.8e-06 54.7 79 41.8
Lj1C1033T24 Lonicera japonica HOM05D000742 ORTHO05D000924 9.8e-06 54.7 97 38.1
Phvul.002G138100 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 9.8e-06 54.7 85 40.0


User provided reference genes

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