Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.3e-178 629.8 360 100.0
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 8.9e-87 324.7 288 60.8
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 3.7e-85 319.3 290 60.7
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.0e-82 311.2 285 60.4
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 6.6e-82 308.5 278 60.4
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 8.6e-82 308.1 292 58.9
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.5e-81 306.6 285 59.6
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.5e-81 306.6 285 58.2
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 8.1e-80 301.6 285 57.2
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 7.6e-78 295.0 292 56.8
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 7.6e-78 295.0 285 56.5
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 8.4e-77 291.6 285 56.5
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 1.2e-75 287.7 359 49.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.2e-75 287.7 289 55.7
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.2e-75 287.7 299 52.5
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 7.8e-75 285.0 289 55.4
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.7e-74 283.9 281 55.5
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.3e-74 283.5 300 53.7
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 5.1e-74 282.3 284 54.9
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.5e-73 280.0 289 54.7
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 5.6e-73 278.9 273 56.0
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.3e-72 277.7 298 53.4
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 3.6e-72 276.2 358 53.6
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 4.8e-72 275.8 287 53.3
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.1e-71 274.6 277 54.9
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.8e-71 273.9 297 54.2
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 2.4e-71 273.5 288 53.5
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 4.0e-71 272.7 286 53.5
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 4.0e-71 272.7 290 54.8
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 9.0e-71 271.6 286 56.3
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.5e-70 270.8 283 51.9
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 2.6e-70 270.0 220 62.7
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 4.4e-70 269.2 289 51.6
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 9.9e-70 268.1 285 50.9
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.9e-69 266.5 290 53.1
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 3.8e-69 266.2 289 53.3
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 8.4e-69 265.0 284 52.5
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.4e-68 264.2 291 50.5
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.9e-68 263.8 277 51.6
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 2.7e-67 260.0 290 50.7
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 3.5e-67 259.6 352 51.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 6.0e-67 258.8 280 51.4
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.9e-66 256.1 283 50.5
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 8.7e-66 255.0 286 51.0
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.7e-66 255.0 283 50.5
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.9e-65 253.8 345 53.6
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 1.3e-64 251.1 292 51.4
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 2.8e-64 250.0 249 53.8
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 3.6e-64 249.6 283 51.9
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.1e-63 248.1 285 52.3
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.2e-62 244.6 280 50.0
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-62 244.6 312 46.8
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.2e-62 244.6 279 50.2
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.5e-62 244.2 283 49.5
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.5e-62 244.2 291 48.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 2.0e-62 243.8 355 51.3
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 2.0e-62 243.8 288 50.0
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 5.8e-62 242.3 282 49.6
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 1.3e-61 241.1 272 50.7
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 1.3e-61 241.1 285 49.5
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.3e-61 241.1 276 50.7
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 2.2e-61 240.4 287 49.1
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.8e-61 239.6 278 50.0
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 6.4e-61 238.8 289 47.8
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.4e-61 238.4 312 46.8
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.1e-60 238.0 289 48.1
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.4e-60 237.7 290 48.3
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 9.3e-60 235.0 283 49.1
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.2e-59 234.6 284 49.3
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.2e-59 234.6 287 47.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 2.7e-59 233.4 287 48.1
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 2.7e-59 233.4 329 44.1
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 3.5e-59 233.0 291 45.0
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 3.5e-59 233.0 287 46.0
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.6e-59 232.6 265 50.6
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 6.0e-59 232.3 268 49.3
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.0e-58 231.5 288 47.9
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.3e-58 230.3 273 50.9
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 2.3e-58 230.3 277 50.5
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.3e-58 230.3 279 48.0
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 5.1e-58 229.2 291 47.1
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 8.7e-58 228.4 290 47.2
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.1e-57 228.0 275 50.5
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.1e-57 228.0 286 45.8
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.9e-57 227.3 290 47.2
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.3e-56 224.6 494 33.4
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.1e-56 223.8 280 48.6
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.0e-54 217.2 275 45.8
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 2.6e-54 216.9 270 47.4
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.2e-53 213.8 277 46.6
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 4.9e-53 212.6 269 45.4
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 2.5e-52 210.3 212 52.8
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 3.5e-51 206.5 285 44.9
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.3e-50 203.8 272 43.4
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 8.7e-50 201.8 169 63.3
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.5e-49 200.3 234 48.7
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.3e-49 199.5 224 50.9
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 1.8e-47 194.1 335 38.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.8e-47 194.1 275 45.1
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.6e-46 190.3 289 42.6
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.2e-45 187.2 290 42.4
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 2.1e-43 180.6 240 45.8
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 3.5e-43 179.9 273 40.7
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 8.7e-42 175.3 196 52.6
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.5e-41 174.5 342 36.3
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 3.1e-39 166.8 155 55.5
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 3.8e-37 159.8 223 42.6
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 2.7e-35 153.7 259 39.4
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 7.4e-33 145.6 260 36.2
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.2e-32 144.1 276 45.3
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.0e-29 135.2 251 32.7
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 5.5e-28 129.4 288 34.0
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.4e-23 114.0 288 32.3
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 7.7e-22 109.0 189 37.6
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.0e-21 108.6 86 64.0
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.7e-21 107.8 161 42.9
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 1.1e-20 105.1 95 54.7
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 9.4e-20 102.1 275 32.4
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 3.6e-11 73.6 222 30.6
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 1.4e-10 71.6 223 30.9
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 1.5e-09 68.2 99 41.4
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 2.4e-07 60.8 212 34.9
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 4.5e-06 56.6 208 34.6


User provided reference genes

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