Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018491 Daucus carota HOM05D005109 ORTHO05D006084 6.6e-202 707.2 373 100.0
DCAR_012551 Daucus carota HOM05D005109 ORTHO05D006084 6.4e-96 355.1 327 62.1
Dinv34633 Davidia involucrata HOM05D005109 ORTHO05D006084 6.0e-70 268.9 365 49.9
Oeu063313.1 Olea europaea HOM05D005109 ORTHO05D006084 6.7e-69 265.4 377 46.4
CSS0032892 Camellia sinensis var. sinensis HOM05D005109 ORTHO05D006084 3.8e-64 249.6 359 45.4
Sabra02G0030500 Salix brachista HOM05D005109 ORTHO05D006084 3.8e-64 249.6 379 44.9
Potri.002G037800 Populus trichocarpa HOM05D005109 ORTHO05D006084 1.1e-63 248.1 369 45.5
Manes.13G034800 Manihot esculenta HOM05D005109 ORTHO05D006084 1.2e-62 244.6 362 42.5
GSVIVG01028346001 Vitis vinifera HOM05D005109 ORTHO05D006084 2.7e-62 243.4 358 44.1
Thecc.01G257200 Theobroma cacao HOM05D005109 ORTHO05D006084 2.3e-61 240.4 362 44.5
Manes.12G033000 Manihot esculenta HOM05D005109 ORTHO05D006084 3.0e-61 240.0 361 42.7
Cc01_g18260 Coffea canephora HOM05D005109 ORTHO05D006084 1.6e-59 234.2 362 46.1
Eucgr.G01947 Eucalyptus grandis HOM05D005109 ORTHO05D006084 3.1e-58 229.9 399 42.1
Eucgr.B01549 Eucalyptus grandis HOM05D005109 ORTHO05D006084 6.9e-58 228.8 394 42.4
Gohir.A08G190200 Gossypium hirsutum HOM05D005109 ORTHO05D006084 3.4e-57 226.5 363 43.0
Gorai.004G221100 Gossypium raimondii HOM05D005109 ORTHO05D006084 3.4e-57 226.5 363 43.0
Gohir.D08G208700 Gossypium hirsutum HOM05D005109 ORTHO05D006084 1.3e-56 224.6 367 43.6
Duzib211G0434 Durio zibethinus HOM05D005109 ORTHO05D006084 1.7e-56 224.2 360 42.8
Peaxi162Scf01280g00016 Petunia axillaris HOM05D005109 ORTHO05D006084 8.4e-56 221.9 365 43.6
Sabra05G0173800 Salix brachista HOM05D005109 ORTHO05D006084 1.9e-55 220.7 365 43.0
MSTRG.17494 Avicennia marina HOM05D005109 ORTHO05D006084 2.5e-55 220.3 367 44.1
Hma1.2p1_0273F.1_g109610 Hydrangea macrophylla HOM05D005109 ORTHO05D006084 7.1e-55 218.8 364 43.1
CAN.G1147.5 Capsicum annuum HOM05D005109 ORTHO05D006084 9.3e-55 218.4 381 40.9
Migut.D00430 Erythranthe guttata HOM05D005109 ORTHO05D006084 9.3e-55 218.4 374 41.2
QL09p039103 Quercus lobata HOM05D005109 ORTHO05D006084 1.6e-54 217.6 368 41.6
Duzib138G0302 Durio zibethinus HOM05D005109 ORTHO05D006084 2.7e-54 216.9 365 41.4
Ciclev10024128m.g Citrus clementina HOM05D005109 ORTHO05D006084 1.0e-53 214.9 393 41.5
PGSC0003DMG400010318 Solanum tuberosum HOM05D005109 ORTHO05D006084 1.0e-53 214.9 376 41.8
Nitab4.5_0000470g0030 Nicotiana tabacum HOM05D005109 ORTHO05D006084 2.3e-53 213.8 364 43.7
EL10As5g23493 Beta vulgaris HOM05D005109 ORTHO05D006084 3.9e-53 213.0 374 39.0
CANSAT01G1854 Cannabis sativa HOM05D005109 ORTHO05D006084 8.7e-53 211.8 385 41.0
Duzib133G1173 Durio zibethinus HOM05D005109 ORTHO05D006084 8.7e-53 211.8 363 40.5
MBI10_g20266_MAGBIO Magnolia biondii HOM05D005109 ORTHO05D006084 1.1e-52 211.5 372 43.3
Cpa.g.sc50.15 Carica papaya HOM05D005109 ORTHO05D006084 9.7e-52 208.4 373 42.1
Sopen09g028260 Solanum pennellii HOM05D005109 ORTHO05D006084 1.3e-51 208.0 367 41.1
Prupe.8G222600 Prunus persica HOM05D005109 ORTHO05D006084 1.1e-50 204.9 384 38.8
ClCG07G001090 Citrullus lanatus HOM05D005109 ORTHO05D006084 1.4e-50 204.5 395 39.5
Gohir.A11G131200 Gossypium hirsutum HOM05D005109 ORTHO05D006084 3.1e-50 203.4 356 39.9
Cfa002435 Carpinus fangiana HOM05D005109 ORTHO05D006084 4.1e-50 203.0 388 40.5
Nn1g02784 Nelumbo nucifera HOM05D005109 ORTHO05D006084 4.1e-50 203.0 328 43.3
Migut.N02209 Erythranthe guttata HOM05D005109 ORTHO05D006084 5.3e-50 202.6 363 40.8
CiPaw.03G265200 Carya illinoinensis HOM05D005109 ORTHO05D006084 3.4e-49 199.9 370 40.0
Haze_24641 Corylus avellana HOM05D005109 ORTHO05D006084 3.4e-49 199.9 394 39.8
Gorai.007G146600 Gossypium raimondii HOM05D005109 ORTHO05D006084 7.7e-49 198.7 356 39.9
SalBow4G0920 Salvia bowleyana HOM05D005109 ORTHO05D006084 1.3e-48 198.0 369 43.6
Ah.11g049450 Amaranthus hybridus HOM05D005109 ORTHO05D006084 1.7e-48 197.6 375 40.0
PGR031G1666 Punica granatum HOM05D005109 ORTHO05D006084 2.2e-48 197.2 370 40.8
Actinidia09543 Actinidia chinensis HOM05D005109 ORTHO05D006084 2.9e-48 196.8 324 41.7
HanXRQChr04g0110521 Helianthus annuus HOM05D005109 ORTHO05D006084 5.0e-48 196.1 360 41.4
AUR62011844 Chenopodium quinoa HOM05D005109 ORTHO05D006084 1.1e-47 194.9 318 41.8
Gohir.D11G136900 Gossypium hirsutum HOM05D005109 ORTHO05D006084 1.1e-47 194.9 356 39.0
Solyc09g025260.4 Solanum lycopersicum HOM05D005109 ORTHO05D006084 1.1e-47 194.9 359 39.0
TAR633G2233 Trochodendron aralioides HOM05D005109 ORTHO05D006084 9.4e-47 191.8 361 39.1
VMungo0720G0144 Vigna mungo HOM05D005109 ORTHO05D006084 1.2e-46 191.4 379 39.8
Glyma.10G037400 Glycine max HOM05D005109 ORTHO05D006084 1.6e-46 191.0 374 40.6
MD10G1183500 Malus domestica HOM05D005109 ORTHO05D006084 1.6e-46 191.0 384 38.0
PSO832G0134 Papaver somniferum HOM05D005109 ORTHO05D006084 1.6e-46 191.0 341 40.8
MELO3C012881.2 Cucumis melo HOM05D005109 ORTHO05D006084 3.6e-46 189.9 392 38.3
COL.COLO4_03875 Corchorus olitorius HOM05D005109 ORTHO05D006084 7.9e-46 188.7 369 39.0
CsaV3_3G022220 Cucumis sativus L. HOM05D005109 ORTHO05D006084 7.9e-46 188.7 395 39.0
PSO210G5198 Papaver somniferum HOM05D005109 ORTHO05D006084 1.8e-45 187.6 340 40.3
TWI18G0717 Tripterygium wilfordii HOM05D005109 ORTHO05D006084 1.8e-45 187.6 362 39.5
ECA236G0222 Erigeron canadensis HOM05D005109 ORTHO05D006084 2.3e-45 187.2 322 42.9
Glyma.13G124000 Glycine max HOM05D005109 ORTHO05D006084 6.7e-45 185.7 366 40.2
RcHm_v2.0_Chr6g0287941 Rosa chinensis HOM05D005109 ORTHO05D006084 8.8e-45 185.3 391 36.8
Sed0018169 Sechium edule HOM05D005109 ORTHO05D006084 1.1e-44 184.9 380 39.2
THA.LOC104826217 Tarenaya hassleriana HOM05D005109 ORTHO05D006084 1.9e-44 184.1 362 40.1
MD05G1196200 Malus domestica HOM05D005109 ORTHO05D006084 4.3e-44 183.0 383 37.1
Lj5g0011614 Lotus japonicus HOM05D005109 ORTHO05D006084 7.4e-44 182.2 371 39.4
Phvul.007G192400 Phaseolus vulgaris HOM05D005109 ORTHO05D006084 2.2e-43 180.6 370 38.6
Potri.005G225200 Populus trichocarpa HOM05D005109 ORTHO05D006084 2.8e-43 180.3 365 38.1
FAN15G3301 Fragaria x ananassa HOM05D005109 ORTHO05D006084 6.3e-43 179.1 381 36.7
Nitab4.5_0005001g0040 Nicotiana tabacum HOM05D005109 ORTHO05D006084 2.4e-42 177.2 329 40.1
TWI12G1013 Tripterygium wilfordii HOM05D005109 ORTHO05D006084 2.4e-42 177.2 362 39.2
FvH4_2g21350 Fragaria vesca HOM05D005109 ORTHO05D006084 6.9e-42 175.6 381 36.2
FAN20G2708 Fragaria x ananassa HOM05D005109 ORTHO05D006084 9.1e-42 175.3 377 36.1
arahy.Tifrunner.gnm1.ann1.A1W3C7 Arachis hypogaea HOM05D005109 ORTHO05D006084 2.6e-41 173.7 366 37.7
arahy.Tifrunner.gnm1.ann1.ZTJ4VR Arachis hypogaea HOM05D005109 ORTHO05D006084 3.4e-41 173.3 370 37.3
FAN24G2940 Fragaria x ananassa HOM05D005109 ORTHO05D006084 7.7e-41 172.2 364 36.3
CARHR005720 Cardamine hirsuta HOM05D005109 ORTHO05D006084 1.3e-40 171.4 393 37.7
Lalb_Chr21g0313891 Lupinus albus HOM05D005109 ORTHO05D006084 1.3e-40 171.4 387 36.7
ATR0736G115 Amborella trichopoda HOM05D005109 ORTHO05D006084 2.2e-40 170.6 344 40.7
Aqoxy5G00221 Aquilegia oxysepala HOM05D005109 ORTHO05D006084 2.9e-40 170.2 339 38.3
AT1G06190 Arabidopsis thaliana HOM05D005109 ORTHO05D006084 3.8e-40 169.9 393 38.4
Lalb_Chr02g0152441 Lupinus albus HOM05D005109 ORTHO05D006084 3.8e-40 169.9 384 38.5
Sed0014438 Sechium edule HOM05D005109 ORTHO05D006084 2.5e-39 167.2 397 38.0
THA.LOC104800869 Tarenaya hassleriana HOM05D005109 ORTHO05D006084 3.2e-39 166.8 375 37.9
Lalb_Chr06g0170501 Lupinus albus HOM05D005109 ORTHO05D006084 4.2e-39 166.4 421 36.1
vmacro02668 Vaccinium macrocarpon HOM05D005109 ORTHO05D006084 2.7e-38 163.7 342 37.4
BcaC01g05971 Brassica carinata HOM05D005109 ORTHO05D006084 6.1e-38 162.5 336 38.1
C03p20590 Brassica napus HOM05D005109 ORTHO05D006084 6.1e-38 162.5 336 38.1
BolC3t14465H Brassica oleracea HOM05D005109 ORTHO05D006084 6.1e-38 162.5 336 38.1
Carub.0001s0555 Capsella rubella HOM05D005109 ORTHO05D006084 6.1e-38 162.5 393 37.7
unitig_8.g3734 Utricularia gibba HOM05D005109 ORTHO05D006084 6.1e-38 162.5 368 38.3
Atru.chr5.1705 Acer truncatum HOM05D005109 ORTHO05D006084 1.0e-37 161.8 359 37.3
Ca_28090_v3 Cicer arietinum L. HOM05D005109 ORTHO05D006084 1.8e-37 161.0 364 36.0
SGA_v2.0_scaffold1G00618 Striga asiatica HOM05D003989 ORTHO05D004626 3.0e-37 160.2 371 36.7
BcaC01g05975 Brassica carinata HOM05D005109 ORTHO05D006084 5.7e-36 156.0 335 37.9
C03p20550 Brassica napus HOM05D005109 ORTHO05D006084 5.7e-36 156.0 335 37.9
BolC3t14435H Brassica oleracea HOM05D005109 ORTHO05D006084 5.7e-36 156.0 335 37.9
Sp4g13630 Schrenkiella parvula HOM05D005109 ORTHO05D006084 5.7e-36 156.0 372 36.6
BcaB02g06816 Brassica carinata HOM05D005109 ORTHO05D006084 1.7e-35 154.5 349 38.1
Sp1g05000 Schrenkiella parvula HOM05D005109 ORTHO05D006084 1.7e-35 154.5 344 38.1
Aa31LG5G5770 Aethionema arabicum HOM05D005109 ORTHO05D006084 2.2e-35 154.1 382 36.6
A10p04820 Brassica napus HOM05D005109 ORTHO05D006084 3.7e-35 153.3 355 37.5
BraA10t42751Z Brassica rapa HOM05D005109 ORTHO05D006084 3.7e-35 153.3 355 37.5
TPR.G18473 Trifolium pratense HOM05D005109 ORTHO05D006084 1.1e-34 151.8 343 36.7
Rhsim13G0035600 Rhododendron simsii HOM05D005109 ORTHO05D006084 1.4e-34 151.4 395 35.2
Actinidia07301 Actinidia chinensis HOM05D005109 ORTHO05D006084 1.8e-34 151.0 200 49.0
Sc17g0000590 Simmondsia chinensis HOM05D005109 ORTHO05D006084 5.3e-34 149.4 383 35.2
A03p17410 Brassica napus HOM05D005109 ORTHO05D006084 5.9e-33 146.0 370 35.4
BraA03t11013Z Brassica rapa HOM05D005109 ORTHO05D006084 5.9e-33 146.0 370 35.4
BcaB01g04060 Brassica carinata HOM05D005109 ORTHO05D006084 7.7e-33 145.6 331 36.0
CARHR124750 Cardamine hirsuta HOM05D005109 ORTHO05D006084 7.7e-33 145.6 339 36.3
AL163U10030 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 1.3e-32 144.8 375 35.2
Medtr1g069855 Medicago truncatula HOM05D005109 ORTHO05D006084 2.9e-32 143.7 327 35.5
BcaC05g24297 Brassica carinata HOM05D005109 ORTHO05D006084 3.8e-32 143.3 345 38.0
C05p04510 Brassica napus HOM05D005109 ORTHO05D006084 3.8e-32 143.3 345 38.0
Dinv33475 Davidia involucrata HOM05D005109 ORTHO05D006084 5.0e-32 142.9 166 52.4
Cc05_g01680 Coffea canephora HOM05D005109 ORTHO05D006084 2.5e-31 140.6 174 50.0
Psat6g041760 Pisum sativum HOM05D005109 ORTHO05D006084 3.2e-31 140.2 369 34.1
Zm00001eb258380 Zea mays HOM05D005109 ORTHO05D006084 3.2e-31 140.2 385 34.0
BolC5t29222H Brassica oleracea HOM05D005109 ORTHO05D006084 7.2e-31 139.0 361 36.8
Actinidia30161 Actinidia chinensis HOM05D005109 ORTHO05D006084 6.1e-30 136.0 243 42.0
COL.COLO4_04035 Corchorus olitorius HOM05D005109 ORTHO05D006084 3.0e-29 133.7 252 40.5
SGA_v2.0_scaffold138G35226 Striga asiatica HOM05D003989 ORTHO05D004626 1.1e-28 131.7 372 35.8
Aa31LG1G7210 Aethionema arabicum HOM05D005109 ORTHO05D006084 1.5e-28 131.3 379 33.5
Thhalv10016746m.g Eutrema salsugineum HOM05D005109 ORTHO05D006084 2.0e-28 131.0 383 32.6
Os03g0183100 Oryza sativa ssp. japonica HOM05D005109 ORTHO05D006084 4.4e-28 129.8 351 31.1
Thhalv10007829m.g Eutrema salsugineum HOM05D005109 ORTHO05D006084 2.4e-26 124.0 357 33.9
Glyma.03G163800 Glycine max HOM05D005109 ORTHO05D006084 6.5e-24 115.9 373 35.9
AL4G26340 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 1.0e-21 108.6 363 31.7
HPP92_012858 Vanilla planifolia HOM05D005109 ORTHO05D006084 6.7e-21 105.9 372 31.7
AL1G16170 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 2.2e-19 100.9 387 32.0
Glyma.19G165100 Glycine max HOM05D005109 ORTHO05D006084 1.8e-18 97.8 357 30.5
Lj1C67T4 Lonicera japonica HOM05D005109 ORTHO05D006084 5.3e-18 96.3 324 32.7
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 1.2e-17 95.1 251 33.9
AT2G31150 Arabidopsis thaliana HOM05D005109 ORTHO05D006084 1.2e-14 85.1 219 35.6
Rhsim01G0262800 Rhododendron simsii HOM05D005109 ORTHO05D006084 9.1e-10 68.9 209 32.5
Hund00596 Selenicereus undatus HOM05D005109 ORTHO05D006084 2.0e-09 67.8 187 33.7
CDE02G3939 Ceratophyllum demersum HOM05D005109 ORTHO05D006084 5.0e-08 63.2 80 45.0


User provided reference genes

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