Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 4.4e-47 191.0 103 100.0
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 4.4e-47 191.0 103 100.0
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.3e-38 162.9 103 83.5
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 1.7e-38 162.5 103 79.6
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 2.2e-38 162.2 101 81.2
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 3.7e-38 161.4 103 81.6
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 4.9e-38 161.0 102 83.3
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 4.9e-38 161.0 101 82.2
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 4.9e-38 161.0 103 82.5
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 6.4e-38 160.6 103 81.6
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 6.4e-38 160.6 103 82.5
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 6.4e-38 160.6 103 82.5
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 6.4e-38 160.6 103 82.5
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 6.4e-38 160.6 103 78.6
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 8.3e-38 160.2 103 81.6
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 8.3e-38 160.2 103 82.5
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 8.3e-38 160.2 103 81.6
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 8.3e-38 160.2 101 79.2
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.3e-38 160.2 101 79.2
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.3e-38 160.2 101 79.2
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.3e-38 160.2 101 79.2
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 8.3e-38 160.2 103 81.6
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 8.3e-38 160.2 101 79.2
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.1e-37 159.8 100 85.0
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.1e-37 159.8 103 80.6
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 1.1e-37 159.8 101 82.2
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 1.1e-37 159.8 103 79.6
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 1.1e-37 159.8 103 80.6
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 1.1e-37 159.8 103 80.6
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 1.4e-37 159.5 103 80.6
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.4e-37 159.5 103 81.6
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 1.4e-37 159.5 101 79.2
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 1.9e-37 159.1 103 79.6
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 1.9e-37 159.1 103 79.6
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 2.4e-37 158.7 103 78.6
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 2.4e-37 158.7 103 80.6
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 2.4e-37 158.7 103 79.6
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 4.1e-37 157.9 100 83.0
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.1e-37 157.9 101 78.2
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 5.4e-37 157.5 102 78.4
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 5.4e-37 157.5 103 80.6
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 7.0e-37 157.1 103 76.7
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 7.0e-37 157.1 103 80.6
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 9.2e-37 156.8 103 79.6
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 9.2e-37 156.8 103 79.6
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 9.2e-37 156.8 103 79.6
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 80.6
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.2e-36 156.4 101 81.2
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 80.6
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 79.6
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 1.2e-36 156.4 102 79.4
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 79.6
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 79.6
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 79.6
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 1.2e-36 156.4 103 79.6
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 1.6e-36 156.0 103 76.7
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.6e-36 156.0 103 79.6
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 1.6e-36 156.0 103 76.7
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 79.6
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 79.6
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 75.7
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 77.7
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 2.1e-36 155.6 103 78.6
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 2.7e-36 155.2 101 78.2
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 3.5e-36 154.8 103 76.7
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 4.6e-36 154.5 103 80.6
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 4.6e-36 154.5 103 80.6
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 4.6e-36 154.5 103 77.7
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 6.0e-36 154.1 102 77.5
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 6.0e-36 154.1 102 78.4
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 7.8e-36 153.7 102 77.5
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 7.8e-36 153.7 103 77.7
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 7.8e-36 153.7 103 78.6
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 7.8e-36 153.7 103 77.7
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 7.8e-36 153.7 103 75.7
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 1.0e-35 153.3 103 78.6
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.0e-35 153.3 101 78.2
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.3e-35 152.9 103 79.6
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.3e-35 152.9 100 77.0
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 1.3e-35 152.9 103 78.6
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 1.7e-35 152.5 103 76.7
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.7e-35 152.5 102 75.5
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 1.7e-35 152.5 103 76.7
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 2.3e-35 152.1 103 76.7
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.0e-35 151.8 103 78.6
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 3.0e-35 151.8 103 77.7
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 3.0e-35 151.8 103 77.7
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 3.0e-35 151.8 103 77.7
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 5.1e-35 151.0 99 78.8
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 6.6e-35 150.6 103 76.7
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 6.6e-35 150.6 103 77.7
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 8.6e-35 150.2 101 76.2
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 8.6e-35 150.2 103 74.8
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.1e-34 149.8 103 75.7
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.5e-34 149.4 101 76.2
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 1.9e-34 149.1 100 78.0
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 2.5e-34 148.7 103 75.7
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 4.3e-34 147.9 103 73.8
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 5.6e-34 147.5 100 77.0
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 1.6e-33 146.0 100 78.0
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 2.1e-33 145.6 99 72.7
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 4.0e-32 141.4 99 71.7
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 6.8e-32 140.6 99 74.7
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 8.9e-32 140.2 99 69.7
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 2.6e-31 138.7 99 69.7
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 5.8e-31 137.5 99 72.7
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 7.5e-31 137.1 99 72.7
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 2.2e-30 135.6 99 68.7
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.1e-29 133.3 99 67.7
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 1.7e-27 125.9 101 61.4
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 8.6e-27 123.6 78 84.6
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.9e-26 122.5 77 84.4
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 3.1e-24 115.2 103 60.2
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 8.4e-22 107.1 67 80.6
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 4.2e-21 104.8 92 63.0
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 4.6e-20 101.3 63 77.8
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 3.0e-19 98.6 95 60.0
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.4e-08 63.2 39 82.1


User provided reference genes

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