Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.9e-153 545.8 277 100.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 2.5e-105 386.0 277 66.4
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.1e-104 382.9 277 67.5
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 5.2e-103 378.3 277 66.8
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.4e-92 343.6 264 62.9
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 4.2e-92 342.0 274 60.9
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 4.2e-92 342.0 279 63.4
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.6e-91 340.1 264 64.4
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 7.8e-91 337.8 266 63.2
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 5.1e-90 335.1 257 63.8
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.8e-88 329.3 276 60.9
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.8e-88 329.3 279 58.8
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 4.8e-88 328.6 274 59.5
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 2.0e-86 323.2 266 60.9
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.6e-86 321.2 276 59.4
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.3e-85 320.5 274 59.1
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 2.9e-85 319.3 278 59.0
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 1.9e-84 316.6 277 57.8
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.6e-83 313.5 277 57.0
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 3.9e-82 308.9 279 55.2
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 6.6e-82 308.1 268 55.6
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.5e-81 307.0 270 58.5
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.9e-81 306.6 227 66.5
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 4.3e-81 305.4 244 61.1
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.3e-80 303.9 271 57.9
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 2.1e-80 303.1 266 56.0
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 2.8e-80 302.8 264 59.1
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 6.2e-80 301.6 269 56.9
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 6.2e-80 301.6 279 53.0
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 4.0e-79 298.9 256 57.8
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 1.2e-78 297.4 279 52.3
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.2e-78 297.4 277 56.0
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 4.5e-78 295.4 269 55.4
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 7.6e-78 294.7 277 56.3
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 9.9e-78 294.3 277 56.7
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 2.9e-77 292.7 272 54.4
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 8.4e-77 291.2 264 54.2
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.9e-76 290.0 304 50.3
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 4.2e-76 288.9 260 58.5
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 7.9e-75 284.6 267 52.4
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.3e-74 283.9 268 54.5
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 3.0e-74 282.7 224 64.3
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.1e-73 280.8 262 53.8
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.3e-72 277.3 268 51.1
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.6e-72 276.9 268 52.2
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 1.6e-72 276.9 277 52.7
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 2.1e-72 276.6 277 52.7
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 3.7e-72 275.8 274 52.9
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 4.0e-71 272.3 277 50.2
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 5.3e-71 271.9 279 51.6
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 9.0e-71 271.2 277 51.3
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 2.0e-70 270.0 275 48.7
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 2.6e-70 269.6 278 50.7
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 3.4e-70 269.2 275 47.3
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.8e-70 268.5 256 53.1
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 7.6e-70 268.1 261 54.0
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.8e-69 265.8 279 48.0
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 3.8e-69 265.8 259 51.7
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 6.5e-69 265.0 277 49.5
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 8.4e-69 264.6 275 47.6
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.9e-68 263.5 264 48.1
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 6.0e-67 258.5 263 50.2
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.3e-66 256.5 276 47.5
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 3.0e-66 256.1 275 49.1
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 5.1e-66 255.4 265 49.1
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.1e-65 254.2 255 52.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 1.5e-65 253.8 269 49.4
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 2.5e-65 253.1 231 55.8
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.3e-64 250.8 280 47.9
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 2.1e-64 250.0 275 47.3
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 6.3e-64 248.4 270 49.6
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 2.4e-63 246.5 261 48.7
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.3e-61 240.7 290 44.8
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 5.0e-61 238.8 270 48.9
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 1.9e-60 236.9 225 55.6
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 2.1e-59 233.4 231 52.4
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.0e-58 231.1 268 45.5
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.0e-58 229.6 231 49.8
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.9e-58 229.2 287 43.6
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.3e-57 225.7 228 50.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.4e-55 220.7 262 43.9
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.8e-55 220.3 256 46.1
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 1.8e-55 220.3 278 45.3
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 3.1e-55 219.5 182 61.0
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 4.1e-55 219.2 221 53.8
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 5.3e-55 218.8 216 52.8
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.6e-54 216.5 258 44.6
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 4.6e-51 205.7 223 43.9
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.4e-50 204.1 260 45.0
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 3.3e-49 199.5 268 40.7
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 4.5e-46 189.1 194 51.5
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 5.5e-44 182.2 177 49.2
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.0e-42 177.9 175 48.6
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.3e-42 176.8 170 50.0
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 4.7e-35 152.5 140 57.1
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 9.1e-23 111.7 108 47.2
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.1e-19 100.5 85 58.8
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 2.2e-16 90.5 275 28.4
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.3e-13 80.5 59 61.0
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-12 77.8 59 59.3
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.4e-09 66.6 59 54.2
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 1.7e-08 64.3 64 50.0
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.9e-08 62.8 52 53.8
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 5.4e-07 59.3 93 43.0
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 7.0e-07 58.9 43 60.5


User provided reference genes

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