Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 0.0e+00 1507.3 742 100.0
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 0.0e+00 1117.8 744 73.9
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1097.8 742 72.2
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 0.0e+00 1087.8 744 71.8
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 0.0e+00 1086.6 744 71.5
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 0.0e+00 1081.6 744 70.8
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1080.1 744 71.2
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 0.0e+00 1080.1 738 71.8
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 0.0e+00 1075.1 744 70.7
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 0.0e+00 1075.1 738 71.3
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 5.1e-312 1073.9 738 71.4
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 5.1e-312 1073.9 759 70.1
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 1.0e-311 1073.2 738 71.5
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 1.0e-311 1072.8 741 69.6
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 1.0e-311 1072.8 741 69.5
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 1.3e-310 1069.3 741 70.0
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 5.0e-310 1067.4 744 71.0
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 5.0e-310 1067.4 750 70.0
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 2.5e-309 1065.1 738 71.0
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 3.2e-309 1064.7 744 70.2
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 4.2e-309 1064.3 741 69.1
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 1.6e-308 1062.4 744 69.9
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 3.6e-308 1061.2 750 68.7
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 3.6e-308 1061.2 738 70.1
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 3.6e-308 1061.2 738 70.9
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 1.4e-307 1059.3 738 70.9
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 1.4e-307 1059.3 741 70.0
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 1.5e-306 1055.8 738 70.6
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 7.5e-306 1053.5 741 68.7
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 1.3e-305 1052.7 741 68.4
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 2.2e-305 1052.0 738 69.4
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 3.7e-305 1051.2 744 70.4
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 4.9e-305 1050.8 738 69.6
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 6.3e-305 1050.4 741 68.8
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 1.1e-304 1049.7 749 67.7
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 4.1e-304 1047.7 741 68.8
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 5.4e-304 1047.3 734 68.8
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 9.2e-304 1046.6 750 69.7
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 1.6e-303 1045.8 744 68.8
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 2.7e-303 1045.0 760 67.0
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 3.5e-303 1044.6 744 68.1
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 2.9e-302 1041.6 741 68.2
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 2.9e-302 1041.6 741 68.2
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 5.0e-302 1040.8 756 67.6
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 6.6e-302 1040.4 741 67.9
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 6.6e-302 1040.4 741 67.7
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 1.1e-301 1039.6 744 68.8
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 2.5e-301 1038.5 744 68.0
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 2.5e-301 1038.5 741 68.7
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 9.5e-301 1036.6 745 67.7
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 9.5e-301 1036.6 741 68.0
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 1.6e-300 1035.8 741 66.9
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 6.1e-300 1033.9 738 67.5
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 1.4e-299 1032.7 743 67.7
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 5.2e-299 1030.8 750 68.5
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 1.5e-298 1029.2 738 67.6
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 2.0e-298 1028.9 759 66.5
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 2.9e-297 1025.0 743 68.8
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 6.4e-297 1023.8 738 66.7
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 1.4e-296 1022.7 744 67.5
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 1.8e-296 1022.3 751 66.2
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 3.2e-296 1021.5 664 73.5
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 5.4e-296 1020.8 741 66.8
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 5.4e-296 1020.8 768 64.8
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 1.2e-295 1019.6 680 74.1
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 2.7e-295 1018.5 755 67.8
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 4.6e-295 1017.7 738 67.1
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 1.5e-293 1012.7 661 73.7
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 1.9e-293 1012.3 738 66.7
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 7.3e-293 1010.4 664 72.4
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 2.1e-292 1008.8 739 66.8
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 2.1e-292 1008.8 738 66.8
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 1.8e-291 1005.7 738 66.4
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 2.3e-291 1005.4 738 66.4
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 3.1e-291 1005.0 738 66.3
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 1.5e-290 1002.7 738 66.0
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 1.5e-290 1002.7 739 66.3
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 9.8e-290 1000.0 775 65.4
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 9.8e-290 1000.0 738 65.6
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 1.7e-289 999.2 738 66.0
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 2.4e-288 995.3 738 66.7
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 1.6e-287 992.6 663 71.9
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 2.1e-284 982.2 667 70.8
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 8.9e-283 976.9 773 63.5
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 2.6e-282 975.3 661 70.2
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 1.2e-279 966.5 740 64.2
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 1.5e-277 959.5 718 65.7
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 7.3e-277 957.2 731 65.8
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 1.6e-276 956.1 778 61.4
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 8.1e-276 953.7 596 76.2
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 2.0e-274 949.1 742 65.0
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 5.8e-266 921.0 814 58.5
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 2.4e-248 862.4 606 68.8
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 3.0e-246 855.5 641 63.7
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 5.3e-243 844.7 740 55.1
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 2.5e-240 835.9 741 54.9
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 1.2e-239 833.6 740 56.1
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 7.2e-232 807.7 629 60.7
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 6.7e-222 774.6 654 60.6
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-215 753.1 664 54.2
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 3.6e-199 699.1 525 64.0
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 2.9e-148 530.0 591 50.3
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 4.9e-132 476.1 782 38.2
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 1.7e-116 424.5 356 56.7
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 8.5e-92 342.4 274 62.0
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 8.8e-89 332.4 277 57.8
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.7e-79 301.6 282 58.5
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 1.4e-65 255.4 235 57.4
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 1.8e-65 255.0 247 56.7
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 2.8e-58 231.1 149 71.1
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 4.1e-46 190.7 121 72.7
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 6.6e-44 183.3 136 64.7
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 2.9e-39 167.9 130 60.8
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 6.9e-25 120.2 92 58.7
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 2.4e-22 111.7 108 48.1
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 9.3e-22 109.8 153 43.8
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 1.1e-19 102.8 100 55.0
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 2.6e-16 91.7 61 68.9
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 4.9e-15 87.4 56 75.0
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 3.1e-09 68.2 43 72.1
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 5.9e-08 63.9 41 73.2
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 8.4e-07 60.1 74 47.3


User provided reference genes

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