Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018199 Daucus carota HOM05D004189 ORTHO05D004092 5.6e-305 1050.4 660 100.0
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 6.3e-54 216.5 685 36.9
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 3.1e-53 214.2 690 35.5
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 3.8e-43 180.6 681 32.7
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 8.0e-41 172.9 680 33.2
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 8.8e-40 169.5 735 34.1
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 3.3e-39 167.5 705 30.5
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.7e-38 165.2 678 32.0
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 8.2e-38 162.9 675 31.3
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 1.4e-37 162.2 738 32.7
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 2.4e-37 161.4 683 32.1
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 4.1e-37 160.6 471 33.5
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 9.1e-37 159.5 697 30.3
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 2.9e-35 154.5 438 32.6
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 2.5e-34 151.4 662 35.0
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 3.2e-34 151.0 452 35.2
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 4.2e-34 150.6 662 34.7
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 9.4e-34 149.4 705 28.5
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 8.0e-33 146.4 562 29.2
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 1.0e-32 146.0 712 31.0
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 1.4e-32 145.6 658 32.4
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.8e-32 145.2 454 31.7
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 1.8e-32 145.2 451 31.5
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 2.3e-32 144.8 439 31.9
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 2.3e-32 144.8 671 32.6
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 5.2e-32 143.7 441 33.6
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.3e-31 141.0 654 28.3
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 5.7e-31 140.2 443 30.9
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 5.7e-31 140.2 621 28.5
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 9.7e-31 139.4 491 29.7
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 3.7e-30 137.5 615 28.9
DCAR_022326 Daucus carota HOM05D004189 ORTHO05D004092 4.8e-30 137.1 74 90.5
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 2.0e-28 131.7 440 30.7
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 1.3e-27 129.0 297 38.4
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 8.5e-27 126.3 654 30.9
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 9.4e-26 122.9 301 36.5
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 1.2e-25 122.5 303 36.6
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 2.1e-25 121.7 572 27.6
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.0e-24 117.9 459 29.8
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 3.0e-24 117.9 243 37.9
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 1.5e-23 115.5 452 29.4
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 2.0e-23 115.2 638 27.3
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 3.4e-23 114.4 381 32.3
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 7.5e-23 113.2 418 30.1
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.2e-22 111.7 680 26.2
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 4.8e-22 110.5 743 33.4
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 8.3e-22 109.8 456 29.8
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 9.1e-21 106.3 496 31.9
ECA233G5127 Erigeron canadensis HOM05D004189 ORTHO05D004092 1.6e-20 105.5 351 28.8
Glyma.16G192000 Glycine max HOM05D004189 ORTHO05D004092 1.6e-20 105.5 170 44.1
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 2.0e-20 105.1 225 35.1
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 5.9e-20 103.6 718 29.7
Glyma.16G192200 Glycine max HOM05D004189 ORTHO05D004092 7.7e-20 103.2 170 44.1
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 1.0e-19 102.8 420 28.3
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.3e-19 102.4 696 25.7
TPR.G10757 Trifolium pratense HOM05D004189 ORTHO05D004092 3.8e-19 100.9 298 35.6
Glyma.16G183700 Glycine max HOM05D004189 ORTHO05D004092 5.0e-19 100.5 170 42.9
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 6.6e-19 100.1 687 26.2
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 8.6e-19 99.8 569 26.9
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 1.5e-18 99.0 296 34.1
Glyma.16G192732 Glycine max HOM05D004189 ORTHO05D004092 1.5e-18 99.0 170 42.4
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 5.5e-18 97.1 383 29.5
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 5.5e-18 97.1 753 25.8
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 7.2e-18 96.7 465 26.7
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 1.6e-17 95.5 688 24.9
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 2.1e-17 95.1 495 27.7
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 4.7e-17 94.0 296 34.8
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 6.1e-17 93.6 463 27.6
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 8.0e-17 93.2 241 34.9
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 1.0e-16 92.8 471 28.0
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 1.4e-16 92.4 464 26.7
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 3.0e-16 91.3 695 25.3
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 5.2e-16 90.5 706 25.5
CARHR265280 Cardamine hirsuta HOM05D004189 ORTHO05D004092 6.8e-16 90.1 701 27.1
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 6.8e-16 90.1 512 27.3
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 1.2e-15 89.4 616 24.8
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 2.0e-15 88.6 451 25.9
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 5.7e-15 87.0 727 25.9
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 7.5e-15 86.7 260 32.3
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 1.3e-14 85.9 744 24.1
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.7e-14 85.5 167 40.1
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 2.2e-14 85.1 449 25.6
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 2.8e-14 84.7 243 32.9
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 3.7e-14 84.3 607 24.4
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 3.7e-14 84.3 607 24.4
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 4.9e-14 84.0 449 26.9
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 1.1e-13 82.8 449 26.7
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 3.1e-13 81.3 247 31.6
FAN10G2376 Fragaria x ananassa HOM05D013146 ORTHO05D004092 5.4e-13 80.5 432 26.4
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 1.6e-12 79.0 436 26.4
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.6e-12 79.0 140 39.3
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 2.0e-12 78.6 449 26.5
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 3.5e-12 77.8 324 29.9
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 5.9e-12 77.0 251 33.5
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 7.8e-12 76.6 607 23.9
GSVIVG01028976001 Vitis vinifera HOM05D004189 ORTHO05D004092 7.8e-12 76.6 238 32.8
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.0e-11 76.3 277 29.6
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 2.3e-11 75.1 311 29.3
Sp7g23610 Schrenkiella parvula HOM05D004189 ORTHO05D004092 6.6e-11 73.6 303 29.7
THA.LOC104800253 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 6.6e-11 73.6 504 25.6
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 1.1e-10 72.8 339 26.3
AT4G25580 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 1.5e-10 72.4 316 30.1
HanXRQChr06g0183811 Helianthus annuus HOM05D004189 ORTHO05D004092 4.3e-10 70.9 439 25.3
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 4.3e-10 70.9 448 28.1
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 5.6e-10 70.5 434 25.6
Ah.07g207200 Amaranthus hybridus HOM05D032681 ORTHO05D004092 1.2e-09 69.3 476 24.6
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 1.6e-09 68.9 444 25.9
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 3.6e-09 67.8 275 30.9
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 4.7e-09 67.4 305 26.9
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 6.1e-09 67.0 377 26.5
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 8.0e-09 66.6 568 24.5
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 1.4e-08 65.9 315 28.9
Aa31LG3G8720 Aethionema arabicum HOM05D004189 ORTHO05D004092 1.8e-08 65.5 296 29.4
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 2.3e-08 65.1 447 25.1
BolC7t45929H Brassica oleracea HOM05D004189 ORTHO05D004092 8.9e-08 63.2 303 30.4
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 8.9e-08 63.2 137 38.7
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 1.2e-07 62.8 294 31.6
A03p56110 Brassica napus HOM05D004189 ORTHO05D004092 1.5e-07 62.4 303 30.0
unitig_46.g18790 Utricularia gibba HOM05D004189 ORTHO05D004092 1.5e-07 62.4 395 27.6
BraA03t14684Z Brassica rapa HOM05D004189 ORTHO05D004092 2.0e-07 62.0 303 30.0
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 3.4e-07 61.2 677 26.7
Ca_10770_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 4.4e-07 60.8 612 24.8
Sp6g14560 Schrenkiella parvula HOM05D004189 ORTHO05D004092 7.5e-07 60.1 293 28.3
PSO782G3290 Papaver somniferum HOM05D057890 ORTHO05D004092 1.3e-06 59.3 248 33.1
AL7G27520 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 3.7e-06 57.8 251 30.7
A08p21090 Brassica napus HOM05D002154 ORTHO05D002362 4.9e-06 57.4 123 36.6
Lalb_Chr21g0305031 Lupinus albus HOM05D004189 ORTHO05D004092 6.4e-06 57.0 218 30.3
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 8.3e-06 56.6 427 27.6


User provided reference genes

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