Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017785 Daucus carota HOM05D002884 ORTHO05D003178 1.8e-125 452.6 232 100.0
DCAR_006758 Daucus carota HOM05D002884 ORTHO05D003178 2.1e-68 263.1 169 87.0
DCAR_004672 Daucus carota HOM05D002884 ORTHO05D003178 1.3e-43 180.6 172 61.6
Hma1.2p1_0514F.1_g170040 Hydrangea macrophylla HOM05D002884 ORTHO05D003178 7.4e-42 174.9 171 62.6
Lj8A238T60 Lonicera japonica HOM05D002884 ORTHO05D003178 3.4e-39 166.0 191 53.9
TAR629G1766 Trochodendron aralioides HOM05D002884 ORTHO05D003178 3.8e-38 162.5 113 76.1
TAR629G3349 Trochodendron aralioides HOM05D002884 ORTHO05D003178 3.8e-38 162.5 113 76.1
ECA240G2117 Erigeron canadensis HOM05D002884 ORTHO05D003178 3.2e-37 159.5 129 69.0
Actinidia02037 Actinidia chinensis HOM05D002884 ORTHO05D003178 4.2e-37 159.1 190 53.2
Oeu031597.1 Olea europaea HOM05D002884 ORTHO05D003178 2.7e-36 156.4 174 57.5
Actinidia14527 Actinidia chinensis HOM05D002884 ORTHO05D003178 1.3e-35 154.1 185 54.6
Hma1.2p1_0371F.1_g138100 Hydrangea macrophylla HOM05D002884 ORTHO05D003178 3.0e-35 152.9 143 62.2
CSS0004594 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 5.1e-35 152.1 169 56.8
Potri.001G109500 Populus trichocarpa HOM05D002884 ORTHO05D003178 5.1e-35 152.1 181 52.5
TAR636G2592 Trochodendron aralioides HOM05D002884 ORTHO05D003178 5.1e-35 152.1 190 51.6
HanXRQChr13g0416781 Helianthus annuus HOM05D002884 ORTHO05D003178 8.7e-35 151.4 182 52.2
Dinv37684 Davidia involucrata HOM05D002884 ORTHO05D003178 1.5e-34 150.6 149 61.1
Dinv39004 Davidia involucrata HOM05D002884 ORTHO05D003178 1.5e-34 150.6 181 54.7
Lsat_1_v5_gn_6_87540 Lactuca sativa HOM05D002884 ORTHO05D003178 4.3e-34 149.1 190 51.1
Sabra03G0086200 Salix brachista HOM05D002884 ORTHO05D003178 9.6e-34 147.9 108 73.1
Rhsim11G0003600 Rhododendron simsii HOM05D002884 ORTHO05D003178 1.6e-33 147.1 177 52.5
arahy.Tifrunner.gnm1.ann1.00WUVK Arachis hypogaea HOM05D002884 ORTHO05D003178 2.8e-33 146.4 122 63.9
arahy.Tifrunner.gnm1.ann1.2WQF85 Arachis hypogaea HOM05D002884 ORTHO05D003178 2.8e-33 146.4 122 63.9
Prupe.5G091800 Prunus persica HOM05D002884 ORTHO05D003178 1.4e-32 144.1 175 53.1
PGR042G2076 Punica granatum HOM05D002884 ORTHO05D003178 1.4e-32 144.1 101 74.3
Aqoxy7G00426 Aquilegia oxysepala HOM05D002884 ORTHO05D003178 1.8e-32 143.7 141 58.9
MSTRG.12015 Avicennia marina HOM05D002884 ORTHO05D003178 1.8e-32 143.7 101 75.2
Oeu011663.1 Olea europaea HOM05D002884 ORTHO05D003178 1.8e-32 143.7 175 53.7
SalBow6G0746 Salvia bowleyana HOM05D002884 ORTHO05D003178 1.8e-32 143.7 101 74.3
Lj2A193T55 Lonicera japonica HOM05D002884 ORTHO05D003178 2.4e-32 143.3 154 58.4
CSS0002116 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 3.1e-32 142.9 147 57.8
CANSAT21G2344 Cannabis sativa HOM05D002884 ORTHO05D003178 5.3e-32 142.1 136 63.2
Haze_08941 Corylus avellana HOM05D002884 ORTHO05D003178 6.9e-32 141.7 193 50.3
Oeu059065.2 Olea europaea HOM05D002884 ORTHO05D003178 6.9e-32 141.7 141 60.3
TWI81G0934 Tripterygium wilfordii HOM05D002884 ORTHO05D003178 6.9e-32 141.7 140 60.0
TWI60G1702 Tripterygium wilfordii HOM05D002884 ORTHO05D003178 1.5e-31 140.6 140 58.6
TAR375G0217 Trochodendron aralioides HOM05D002884 ORTHO05D003178 1.5e-31 140.6 188 50.5
CAN.G981.24 Capsicum annuum HOM05D002884 ORTHO05D003178 2.6e-31 139.8 95 75.8
Cc08_g14060 Coffea canephora HOM05D002884 ORTHO05D003178 2.6e-31 139.8 140 58.6
MD04G1066700 Malus domestica HOM05D002884 ORTHO05D003178 2.6e-31 139.8 180 50.0
Eucgr.E00535 Eucalyptus grandis HOM05D002884 ORTHO05D003178 3.4e-31 139.4 106 69.8
Potri.003G122300 Populus trichocarpa HOM05D002884 ORTHO05D003178 3.4e-31 139.4 143 59.4
Cpa.g.sc74.81 Carica papaya HOM05D002884 ORTHO05D003178 4.5e-31 139.0 140 60.7
Cfa012110 Carpinus fangiana HOM05D002884 ORTHO05D003178 4.5e-31 139.0 160 54.4
CiPaw.11G140600 Carya illinoinensis HOM05D002884 ORTHO05D003178 4.5e-31 139.0 149 57.7
Lj2g0016961 Lotus japonicus HOM05D002884 ORTHO05D003178 7.6e-31 138.3 94 77.7
CsaV3_3G003750 Cucumis sativus L. HOM05D002884 ORTHO05D003178 1.0e-30 137.9 131 61.8
Lsat_1_v5_gn_3_5420 Lactuca sativa HOM05D002884 ORTHO05D003178 1.0e-30 137.9 187 49.2
Rhsim07G0094100 Rhododendron simsii HOM05D002884 ORTHO05D003178 1.0e-30 137.9 169 53.3
MELO3C014057.2 Cucumis melo HOM05D002884 ORTHO05D003178 1.3e-30 137.5 131 61.8
vmacro00201 Vaccinium macrocarpon HOM05D002884 ORTHO05D003178 1.3e-30 137.5 142 58.5
Nn6g34230 Nelumbo nucifera HOM05D002884 ORTHO05D003178 2.2e-30 136.7 153 56.2
Lalb_Chr16g0377211 Lupinus albus HOM05D002884 ORTHO05D003178 2.9e-30 136.3 94 76.6
ClCG00G000910 Citrullus lanatus HOM05D002884 ORTHO05D003178 3.8e-30 136.0 131 61.8
ClCG00G001160 Citrullus lanatus HOM05D002884 ORTHO05D003178 3.8e-30 136.0 131 61.8
ClCG10G003770 Citrullus lanatus HOM05D002884 ORTHO05D003178 3.8e-30 136.0 131 61.8
Sc01g0008750 Simmondsia chinensis HOM05D002884 ORTHO05D003178 3.8e-30 136.0 133 60.9
TPR.G19228 Trifolium pratense HOM05D002884 ORTHO05D003178 3.8e-30 136.0 104 72.1
Peaxi162Scf00714g00057 Petunia axillaris HOM05D002884 ORTHO05D003178 8.4e-30 134.8 147 54.4
Nitab4.5_0002234g0060 Nicotiana tabacum HOM05D002884 ORTHO05D003178 1.1e-29 134.4 92 75.0
Ah.12g057580 Amaranthus hybridus HOM05D002884 ORTHO05D003178 1.4e-29 134.0 126 63.5
FAN04G2772 Fragaria x ananassa HOM05D002884 ORTHO05D003178 1.4e-29 134.0 94 74.5
MBI12_g29747_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 1.4e-29 134.0 101 70.3
Sabra01G0082800 Salix brachista HOM05D002884 ORTHO05D003178 1.9e-29 133.7 134 59.7
Sopen08g028740 Solanum pennellii HOM05D002884 ORTHO05D003178 1.9e-29 133.7 138 58.0
Lalb_Chr09g0321151 Lupinus albus HOM05D002884 ORTHO05D003178 2.5e-29 133.3 94 73.4
RcHm_v2.0_Chr7g0199121 Rosa chinensis HOM05D002884 ORTHO05D003178 2.5e-29 133.3 136 58.1
Atru.chr9.1547 Acer truncatum HOM05D002884 ORTHO05D003178 3.2e-29 132.9 138 60.1
VMungo1215G1054 Vigna mungo HOM05D002884 ORTHO05D003178 3.2e-29 132.9 179 50.3
Glyma.17G131100 Glycine max HOM05D002884 ORTHO05D003178 4.2e-29 132.5 130 60.8
Lalb_Chr16g0389741 Lupinus albus HOM05D002884 ORTHO05D003178 4.2e-29 132.5 94 78.7
QL12p017410 Quercus lobata HOM05D002884 ORTHO05D003178 4.2e-29 132.5 99 70.7
FAN13G0317 Fragaria x ananassa HOM05D002884 ORTHO05D003178 5.5e-29 132.1 94 73.4
PGSC0003DMG400003048 Solanum tuberosum HOM05D002884 ORTHO05D003178 5.5e-29 132.1 94 73.4
Ca_20250_v3 Cicer arietinum L. HOM05D002884 ORTHO05D003178 9.3e-29 131.3 135 60.0
FvH4_5g01560 Fragaria vesca HOM05D002884 ORTHO05D003178 9.3e-29 131.3 92 73.9
FAN08G3344 Fragaria x ananassa HOM05D002884 ORTHO05D003178 9.3e-29 131.3 92 73.9
FAN18G2326 Fragaria x ananassa HOM05D002884 ORTHO05D003178 9.3e-29 131.3 92 73.9
COL.COLO4_05264 Corchorus olitorius HOM05D002884 ORTHO05D003178 1.2e-28 131.0 99 72.7
ECA246G0929 Erigeron canadensis HOM05D003547 ORTHO05D004236 1.2e-28 131.0 143 55.2
Manes.01G066200 Manihot esculenta HOM05D002884 ORTHO05D003178 1.2e-28 131.0 143 57.3
Medtr4g102810 Medicago truncatula HOM05D002884 ORTHO05D003178 1.2e-28 131.0 133 57.9
Psat4g066960 Pisum sativum HOM05D002884 ORTHO05D003178 1.2e-28 131.0 97 74.2
Glyma.05G049200 Glycine max HOM05D002884 ORTHO05D003178 1.6e-28 130.6 93 75.3
Gohir.D12G228000 Gossypium hirsutum HOM05D002884 ORTHO05D003178 1.6e-28 130.6 99 74.7
Gorai.008G244000 Gossypium raimondii HOM05D002884 ORTHO05D003178 1.6e-28 130.6 99 74.7
Solyc08g080410.3 Solanum lycopersicum HOM05D002884 ORTHO05D003178 2.1e-28 130.2 95 72.6
Hund11524 Selenicereus undatus HOM05D002884 ORTHO05D003178 2.7e-28 129.8 126 62.7
FAN08G2255 Fragaria x ananassa HOM05D002884 ORTHO05D003178 6.0e-28 128.6 92 72.8
Oeu048784.1 Olea europaea HOM05D002884 ORTHO05D003178 7.9e-28 128.3 161 49.1
Gohir.A12G225400 Gossypium hirsutum HOM05D002884 ORTHO05D003178 1.0e-27 127.9 99 72.7
Lalb_Chr05g0225031 Lupinus albus HOM05D002884 ORTHO05D003178 1.3e-27 127.5 94 76.6
GSVIVG01019815001 Vitis vinifera HOM05D002884 ORTHO05D003178 1.3e-27 127.5 159 53.5
Ciclev10019482m.g Citrus clementina HOM05D002884 ORTHO05D003178 3.9e-27 125.9 134 59.0
Migut.A00926 Erythranthe guttata HOM05D002884 ORTHO05D003178 3.9e-27 125.9 155 52.3
Nn1g01376 Nelumbo nucifera HOM05D002884 ORTHO05D003178 3.9e-27 125.9 145 56.6
SGA_v2.0_scaffold144G35971 Striga asiatica HOM05D002884 ORTHO05D003178 6.7e-27 125.2 177 48.0
CDE11G0083 Ceratophyllum demersum HOM05D002884 ORTHO05D003178 8.7e-27 124.8 141 53.2
PSO782G3187 Papaver somniferum HOM05D002884 ORTHO05D003178 8.7e-27 124.8 104 66.3
Thecc.03G272100 Theobroma cacao HOM05D002884 ORTHO05D003178 8.7e-27 124.8 126 60.3
PSO478G0346 Papaver somniferum HOM05D002884 ORTHO05D003178 1.1e-26 124.4 105 65.7
Sed0001920 Sechium edule HOM05D002884 ORTHO05D003178 1.1e-26 124.4 130 58.5
CiPaw.12G097600 Carya illinoinensis HOM05D002884 ORTHO05D003178 1.9e-26 123.6 142 54.2
Hund11525 Selenicereus undatus HOM05D002884 ORTHO05D003178 2.5e-26 123.2 126 61.1
CDE09G0350 Ceratophyllum demersum HOM05D002884 ORTHO05D003178 4.3e-26 122.5 141 52.5
Duzib068G1440 Durio zibethinus HOM05D002884 ORTHO05D003178 4.3e-26 122.5 146 55.5
Duzib205G1004 Durio zibethinus HOM05D002884 ORTHO05D003178 4.3e-26 122.5 144 56.2
THA.LOC104814310 Tarenaya hassleriana HOM05D002884 ORTHO05D003178 4.3e-26 122.5 142 55.6
MD06G1073600 Malus domestica HOM05D002884 ORTHO05D003178 1.3e-25 120.9 133 56.4
SHI09624 Sapria himalayana HOM05D002884 ORTHO05D003178 1.3e-25 120.9 128 58.6
BcaB05g23812 Brassica carinata HOM05D002884 ORTHO05D003178 2.8e-25 119.8 112 62.5
Phvul.003G212000 Phaseolus vulgaris HOM05D002884 ORTHO05D003178 3.7e-25 119.4 130 56.2
Zm00001eb198600 Zea mays HOM05D002884 ORTHO05D003178 3.7e-25 119.4 142 55.6
AT4G11740 Arabidopsis thaliana HOM05D002884 ORTHO05D003178 4.8e-25 119.0 179 46.9
BcaC03g16334 Brassica carinata HOM05D002884 ORTHO05D003178 8.2e-25 118.2 135 52.6
C02p41530 Brassica napus HOM05D002884 ORTHO05D003178 8.2e-25 118.2 135 52.6
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 8.2e-25 118.2 105 61.0
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 1.1e-24 117.9 176 47.2
AL6G46330 Arabidopsis lyrata HOM05D002884 ORTHO05D003178 1.4e-24 117.5 142 52.8
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 1.4e-24 117.5 101 66.3
Gohir.D09G187200 Gossypium hirsutum HOM05D002884 ORTHO05D003178 1.4e-24 117.5 101 66.3
Gorai.006G210000 Gossypium raimondii HOM05D002884 ORTHO05D003178 1.4e-24 117.5 101 66.3
SGA_v2.0_scaffold385G50454 Striga asiatica HOM05D002884 ORTHO05D003178 1.4e-24 117.5 177 46.9
BolC2t10170H Brassica oleracea HOM05D002884 ORTHO05D003178 5.3e-24 115.5 142 49.3
unitig_26.g9695 Utricularia gibba HOM05D002884 ORTHO05D003178 9.0e-24 114.8 174 46.0
CDE04G2022 Ceratophyllum demersum HOM05D002884 ORTHO05D003178 2.0e-23 113.6 131 52.7
Os08g0546400 Oryza sativa ssp. japonica HOM05D002884 ORTHO05D003178 5.9e-23 112.1 142 52.8
Os09g0525600 Oryza sativa ssp. japonica HOM05D002884 ORTHO05D003178 5.9e-23 112.1 142 52.1
EL10Ac5g12735 Beta vulgaris HOM05D002884 ORTHO05D003178 7.6e-23 111.7 92 66.3
Thhalv10028549m.g Eutrema salsugineum HOM05D002884 ORTHO05D003178 7.6e-23 111.7 142 51.4
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 1.0e-22 111.3 91 68.1
AUR62010645 Chenopodium quinoa HOM05D002884 ORTHO05D003178 1.0e-22 111.3 140 52.1
CARHR254610 Cardamine hirsuta HOM05D002884 ORTHO05D003178 1.7e-22 110.5 142 50.0
Nitab4.5_0002853g0040 Nicotiana tabacum HOM05D002884 ORTHO05D003178 2.2e-22 110.2 100 62.0
C09p34700 Brassica napus HOM05D002884 ORTHO05D003178 3.8e-22 109.4 102 61.8
Carub.0006s3083 Capsella rubella HOM05D002884 ORTHO05D003178 3.8e-22 109.4 128 53.9
Sp6g05690 Schrenkiella parvula HOM05D002884 ORTHO05D003178 3.8e-22 109.4 91 64.8
AUR62017287 Chenopodium quinoa HOM05D002884 ORTHO05D003178 5.0e-22 109.0 133 53.4
BolC9t56316H Brassica oleracea HOM05D002884 ORTHO05D003178 1.1e-21 107.8 114 57.9
BcaB01g01676 Brassica carinata HOM05D002884 ORTHO05D003178 1.4e-21 107.5 91 63.7
Mapoly0001s0364 Marchantia polymorpha HOM05D002884 ORTHO05D003178 1.9e-21 107.1 109 56.0
BcaNung06111 Brassica carinata HOM05D002884 ORTHO05D003178 3.2e-21 106.3 143 49.7
A09p27380 Brassica napus HOM05D002884 ORTHO05D003178 3.2e-21 106.3 143 49.7
THA.LOC104806375 Tarenaya hassleriana HOM05D002884 ORTHO05D003178 5.5e-21 105.5 91 67.0
BraA09t38307Z Brassica rapa HOM05D002884 ORTHO05D003178 9.4e-21 104.8 92 64.1
CARHR230100 Cardamine hirsuta HOM05D002884 ORTHO05D003178 9.4e-21 104.8 142 51.4
HanXRQChr17g0533751 Helianthus annuus HOM05D002884 ORTHO05D003178 9.4e-21 104.8 134 49.3
BraA02t07602Z Brassica rapa HOM05D002884 ORTHO05D003178 3.6e-20 102.8 88 63.6
ATR0757G204 Amborella trichopoda HOM05D002884 ORTHO05D003178 4.6e-20 102.4 126 53.2
SEGI_16894 Sequoiadendron giganteum HOM05D002884 ORTHO05D003178 1.0e-19 101.3 125 48.8
HanXRQChr13g0417491 Helianthus annuus HOM05D002884 ORTHO05D003178 5.1e-19 99.0 113 54.9
AL7G30460 Arabidopsis lyrata HOM05D002884 ORTHO05D003178 3.3e-18 96.3 87 64.4
AT4G23040 Arabidopsis thaliana HOM05D002884 ORTHO05D003178 3.3e-18 96.3 87 64.4
Carub.0007s1823 Capsella rubella HOM05D002884 ORTHO05D003178 4.3e-18 95.9 87 60.9
Zm00001eb103170 Zea mays HOM05D002884 ORTHO05D003178 7.4e-18 95.1 110 54.5
A02p26030 Brassica napus HOM05D002884 ORTHO05D003178 9.7e-18 94.7 135 45.9
SMO271G0047 Selaginella moellendorffii HOM05D002884 ORTHO05D003178 4.8e-17 92.4 143 46.9
Haze_15214 Corylus avellana HOM05D002884 ORTHO05D003178 2.6e-15 86.7 130 49.2
Atru.chr5.413 Acer truncatum HOM05D002884 ORTHO05D003178 3.4e-15 86.3 131 45.8
Thecc.01G367100 Theobroma cacao HOM05D002884 ORTHO05D003178 3.8e-14 82.8 105 48.6
CiPaw.01G054900 Carya illinoinensis HOM05D002884 ORTHO05D003178 5.5e-13 79.0 130 44.6
Ciclev10019779m.g Citrus clementina HOM05D002884 ORTHO05D003178 7.2e-13 78.6 130 43.1
Cpa.g.sc18.220 Carica papaya HOM05D002884 ORTHO05D003178 1.2e-12 77.8 175 36.6
Duzib138G0581 Durio zibethinus HOM05D002884 ORTHO05D003178 4.7e-12 75.9 140 37.1
Manes.01G261500 Manihot esculenta HOM05D002884 ORTHO05D003178 1.4e-11 74.3 139 41.7
Gorai.001G171400 Gossypium raimondii HOM05D002884 ORTHO05D003178 1.8e-11 73.9 154 36.4
Gohir.D07G149800 Gossypium hirsutum HOM05D002884 ORTHO05D003178 8.8e-11 71.6 137 37.2
Aqoxy6G01981 Aquilegia oxysepala HOM05D002884 ORTHO05D003178 3.3e-10 69.7 79 55.7
CANSAT56G1884 Cannabis sativa HOM05D002884 ORTHO05D003178 3.3e-10 69.7 140 39.3
QL08p050399 Quercus lobata HOM05D002884 ORTHO05D003178 7.4e-10 68.6 150 40.0
Gohir.A07G143900 Gossypium hirsutum HOM05D002884 ORTHO05D003178 1.3e-09 67.8 140 36.4
COL.COLO4_12615 Corchorus olitorius HOM05D002884 ORTHO05D003178 2.2e-09 67.0 139 36.7
CDE12G0835 Ceratophyllum demersum HOM05D002884 ORTHO05D003178 4.8e-09 65.9 75 54.7
QL08p050362 Quercus lobata HOM05D002884 ORTHO05D003178 6.3e-09 65.5 71 49.3
arahy.Tifrunner.gnm1.ann1.EU6ASS Arachis hypogaea HOM05D002884 ORTHO05D003178 5.3e-08 62.4 128 36.7
HPP92_022610 Vanilla planifolia HOM05D002884 ORTHO05D003178 7.0e-08 62.0 67 56.7
Potri.014G075600 Populus trichocarpa HOM05D002884 ORTHO05D003178 4.5e-07 59.3 129 39.5
Prupe.2G156600 Prunus persica HOM05D002884 ORTHO05D003178 5.9e-07 58.9 85 45.9
Sabra14G0056200 Salix brachista HOM05D002884 ORTHO05D003178 1.0e-06 58.2 147 35.4
Aqoxy4G02115 Aquilegia oxysepala HOM05D028087 ORTHO05D078758 2.2e-06 57.0 59 54.2
Aqoxy2G03803 Aquilegia oxysepala HOM05D028087 ORTHO05D077627 2.9e-06 56.6 71 47.9
RcHm_v2.0_Chr1g0352561 Rosa chinensis HOM05D002884 ORTHO05D003178 2.9e-06 56.6 129 37.2
arahy.Tifrunner.gnm1.ann1.82UWGV Arachis hypogaea HOM05D002884 ORTHO05D003178 5.0e-06 55.8 134 34.3
HanXRQChr13g0417541 Helianthus annuus HOM05D002884 ORTHO05D003178 6.5e-06 55.5 53 52.8
MD01G1050500 Malus domestica HOM05D002884 ORTHO05D003178 8.5e-06 55.1 93 46.2


User provided reference genes

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