Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 7.8e-73 276.9 132 100.0
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.6e-57 226.1 125 80.0
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.3e-56 223.0 127 74.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.5e-55 219.5 127 75.6
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.9e-55 219.2 127 75.6
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 5.6e-55 217.6 130 72.3
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 5.6e-55 217.6 130 71.5
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.3e-54 216.5 127 73.2
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.6e-54 216.1 130 71.5
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.1e-54 215.7 127 73.2
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 3.1e-53 211.8 129 70.5
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.1e-53 211.8 123 75.6
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 5.3e-53 211.1 130 70.8
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 6.9e-53 210.7 125 72.8
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 6.9e-53 210.7 125 72.8
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 9.0e-53 210.3 129 72.1
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 9.0e-53 210.3 125 72.8
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 74.0
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.2e-52 209.9 132 70.5
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.0e-52 209.1 127 72.4
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.0e-52 209.1 130 70.8
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 2.6e-52 208.8 130 68.5
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 3.4e-52 208.4 127 71.7
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 3.4e-52 208.4 129 69.8
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 3.4e-52 208.4 128 69.5
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 7.6e-52 207.2 128 71.1
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 7.6e-52 207.2 130 68.5
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 7.6e-52 207.2 128 69.5
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 9.9e-52 206.8 131 71.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.3e-51 206.5 127 69.3
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 1.7e-51 206.1 125 71.2
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 1.7e-51 206.1 126 69.8
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.7e-51 206.1 128 74.2
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 3.8e-51 204.9 127 69.3
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 3.8e-51 204.9 129 67.4
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 4.9e-51 204.5 130 68.5
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 6.4e-51 204.1 130 68.5
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 8.4e-51 203.8 129 65.1
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 8.4e-51 203.8 129 69.8
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 8.4e-51 203.8 127 70.9
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 1.1e-50 203.4 130 68.5
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 1.1e-50 203.4 130 68.5
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.1e-50 203.4 127 68.5
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.4e-50 203.0 131 68.7
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 2.4e-50 202.2 127 70.1
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 2.4e-50 202.2 127 67.7
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 3.2e-50 201.8 130 67.7
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 3.2e-50 201.8 130 67.7
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 4.2e-50 201.4 132 67.4
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 4.2e-50 201.4 126 69.0
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 4.2e-50 201.4 131 67.2
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 4.2e-50 201.4 130 67.7
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 5.5e-50 201.1 132 65.9
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 7.1e-50 200.7 132 65.2
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 7.1e-50 200.7 132 65.2
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 7.1e-50 200.7 132 65.2
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 7.1e-50 200.7 132 65.2
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 7.1e-50 200.7 132 65.2
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 7.1e-50 200.7 126 68.3
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 7.1e-50 200.7 127 66.9
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 9.3e-50 200.3 127 70.1
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.2e-49 199.9 129 68.2
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.2e-49 199.9 129 68.2
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.2e-49 199.9 126 67.5
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 1.2e-49 199.9 130 66.2
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 68.0
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 68.0
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 1.2e-49 199.9 127 66.9
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 2.1e-49 199.1 130 66.2
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 2.1e-49 199.1 129 65.9
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.7e-49 198.7 128 67.2
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 2.7e-49 198.7 130 65.4
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 3.5e-49 198.4 130 66.9
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 6.0e-49 197.6 127 65.4
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 7.9e-49 197.2 165 57.0
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 1.0e-48 196.8 127 65.4
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.0e-48 196.8 122 69.7
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 1.3e-48 196.4 128 67.2
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 1.3e-48 196.4 127 64.6
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.3e-48 196.4 130 67.7
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.8e-48 196.1 126 68.3
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.3e-48 195.7 128 66.4
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 3.0e-48 195.3 130 66.2
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 5.1e-48 194.5 128 65.6
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 8.7e-48 193.7 128 63.3
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 8.7e-48 193.7 126 65.9
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.1e-47 193.4 126 65.1
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.5e-47 193.0 123 67.5
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 1.5e-47 193.0 130 63.8
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.5e-47 193.0 127 66.1
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.3e-46 189.9 112 75.0
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.4e-45 186.4 130 61.5
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 1.5e-44 183.0 127 60.6
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 4.5e-44 181.4 131 61.1
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 5.8e-44 181.0 112 70.5
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.7e-43 179.5 126 63.5
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 2.9e-43 178.7 114 66.7
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 9.3e-42 173.7 127 58.3
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 4.1e-37 158.3 125 54.4
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 2.6e-36 155.6 109 65.1
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 1.3e-35 153.3 126 53.2
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 3.9e-32 141.7 129 49.6
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 8.7e-32 140.6 129 48.8
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 1.5e-31 139.8 125 52.8
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 2.8e-30 135.6 124 51.6
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.2e-28 130.2 153 43.8
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 6.5e-27 124.4 79 69.6
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 4.4e-23 111.7 82 59.8
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 9.7e-23 110.5 74 68.9
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.5e-20 103.2 57 73.7
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 3.8e-19 98.6 57 68.4
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 7.2e-18 94.4 53 71.7
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 6.1e-17 91.3 57 63.2
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 6.1e-17 91.3 68 60.3
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.4e-16 90.1 57 63.2
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.6e-07 59.3 43 55.8
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.4e-07 58.5 43 53.5


User provided reference genes

Program Settings