Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016594 Daucus carota HOM05D006238 ORTHO05D007458 4.8e-47 192.2 249 100.0
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 3.7e-31 139.4 231 93.9
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 6.9e-30 135.2 231 91.3
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 4.5e-29 132.5 231 91.3
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 4.5e-29 132.5 231 88.7
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 4.5e-29 132.5 229 93.0
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 5.9e-29 132.1 231 91.3
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 5.9e-29 132.1 231 91.3
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 5.9e-29 132.1 231 91.8
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 7.7e-29 131.7 231 91.3
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 1.3e-28 131.0 231 81.0
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 1.3e-28 131.0 231 90.9
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 1.7e-28 130.6 230 91.3
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 1.7e-28 130.6 230 91.3
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 2.2e-28 130.2 231 89.6
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 2.2e-28 130.2 231 90.5
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 2.2e-28 130.2 231 84.0
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 2.9e-28 129.8 231 90.5
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 2.9e-28 129.8 231 91.3
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 2.9e-28 129.8 228 84.6
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 3.8e-28 129.4 231 90.9
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 5.0e-28 129.0 231 81.8
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 6.5e-28 128.6 231 90.5
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 6.5e-28 128.6 231 90.5
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 6.5e-28 128.6 231 90.5
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 8.5e-28 128.3 229 88.6
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 8.5e-28 128.3 229 82.1
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 8.5e-28 128.3 231 83.1
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 8.5e-28 128.3 231 86.6
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 1.1e-27 127.9 231 90.9
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 1.1e-27 127.9 229 90.0
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 1.4e-27 127.5 231 81.8
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 1.4e-27 127.5 231 83.5
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 1.4e-27 127.5 231 90.0
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 1.4e-27 127.5 231 90.0
Cc04_g15060 Coffea canephora HOM05D006238 ORTHO05D007458 1.9e-27 127.1 228 90.4
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 1.9e-27 127.1 231 90.0
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 1.9e-27 127.1 229 89.5
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 3.2e-27 126.3 231 90.5
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 3.2e-27 126.3 231 88.7
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 3.2e-27 126.3 231 90.0
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 4.2e-27 125.9 226 89.8
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 5.5e-27 125.6 231 82.3
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 5.5e-27 125.6 231 89.6
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 7.2e-27 125.2 231 88.7
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 9.4e-27 124.8 231 89.2
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 9.4e-27 124.8 231 87.4
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 9.4e-27 124.8 226 90.3
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 1.2e-26 124.4 229 89.1
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 3.6e-26 122.9 231 89.2
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 3.6e-26 122.9 229 89.1
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.6e-26 122.9 231 89.2
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 7.9e-26 121.7 228 63.2
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 1.0e-25 121.3 231 88.7
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 1.0e-25 121.3 231 88.7
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 1.0e-25 121.3 231 88.7
Gorai.008G197100 Gossypium raimondii HOM05D006238 ORTHO05D007458 1.4e-25 120.9 233 87.6
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 1.8e-25 120.6 231 87.9
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 2.3e-25 120.2 235 88.1
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 2.3e-25 120.2 230 87.0
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 2.3e-25 120.2 229 87.8
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 2.3e-25 120.2 231 87.4
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 8.8e-25 118.2 229 86.9
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 1.1e-24 117.9 231 87.9
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 1.5e-24 117.5 231 88.3
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 1.5e-24 117.5 231 89.6
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 2.0e-24 117.1 230 86.1
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 2.6e-24 116.7 227 36.6
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 3.3e-24 116.3 64 87.5
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 4.4e-24 115.9 229 86.9
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 5.7e-24 115.5 230 87.4
Dinv38791 Davidia involucrata HOM05D006238 ORTHO05D007458 9.7e-24 114.8 63 88.9
Manes.06G087000 Manihot esculenta HOM05D006238 ORTHO05D007458 1.3e-23 114.4 64 87.5
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 1.3e-23 114.4 229 86.0
Cpa.g.sc94.12 Carica papaya HOM05D006238 ORTHO05D007458 2.2e-23 113.6 62 87.1
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 2.2e-23 113.6 229 86.0
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 2.8e-23 113.2 229 85.6
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 2.8e-23 113.2 229 85.6
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 2.8e-23 113.2 225 88.4
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 3.7e-23 112.8 229 84.7
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 3.7e-23 112.8 229 84.7
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 3.7e-23 112.8 229 84.7
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 4.8e-23 112.5 226 85.4
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 4.8e-23 112.5 266 50.0
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 4.8e-23 112.5 231 87.0
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 6.3e-23 112.1 231 87.0
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 8.2e-23 111.7 229 85.2
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 1.1e-22 111.3 229 86.0
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 1.1e-22 111.3 229 86.0
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 1.1e-22 111.3 229 86.0
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 1.4e-22 110.9 229 85.2
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 1.4e-22 110.9 229 85.6
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 1.4e-22 110.9 229 85.6
Phvul.009G193701 Phaseolus vulgaris HOM05D006238 ORTHO05D007458 1.4e-22 110.9 63 85.7
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 1.8e-22 110.5 229 84.7
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 2.4e-22 110.2 62 87.1
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 2.4e-22 110.2 63 85.7
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 3.1e-22 109.8 229 84.7
Nitab4.5_0005160g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 3.1e-22 109.8 62 83.9
PGSC0003DMG400005395 Solanum tuberosum HOM05D006238 ORTHO05D007458 3.1e-22 109.8 63 84.1
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 5.3e-22 109.0 231 86.6
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 9.1e-22 108.2 229 85.6
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 9.1e-22 108.2 229 84.3
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 1.2e-21 107.8 252 65.9
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.5e-21 107.5 64 79.7
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 2.0e-21 107.1 63 82.5
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 2.7e-18 96.7 63 69.8
HPP92_027112 Vanilla planifolia HOM05D006238 ORTHO05D007458 2.7e-18 96.7 63 69.8
Dinv10691 Davidia involucrata HOM05D000773 ORTHO05D000588 6.7e-17 92.0 213 89.7
Hund26925 Selenicereus undatus HOM05D006238 ORTHO05D007458 1.5e-16 90.9 66 68.2
AagrBONN_evm.TU.Sc2ySwM_228.2402 Anthoceros agrestis HOM05D006238 ORTHO05D007458 5.7e-16 89.0 61 63.9
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 1.2e-13 81.3 52 71.2
SMO364G0258 Selaginella moellendorffii HOM05D006238 ORTHO05D007458 1.0e-12 78.2 60 55.0
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 8.5e-12 75.1 61 54.1
Sabra15G0078500 Salix brachista HOM05D006238 ORTHO05D007458 2.5e-11 73.6 43 79.1
CBR_g18689 Chara braunii HOM05D006238 ORTHO05D007458 2.1e-10 70.5 59 49.2
Oeu062485.1 Olea europaea HOM05D006238 ORTHO05D007458 2.7e-10 70.1 45 75.6
AUR62008501 Chenopodium quinoa HOM05D006238 ORTHO05D007458 3.6e-10 69.7 45 71.1
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 3.6e-10 69.7 39 84.6
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 3.6e-10 69.7 39 84.6
Cpa.g.sc94.13 Carica papaya HOM05D006238 ORTHO05D007458 2.3e-09 67.0 44 75.0
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 6.7e-09 65.5 60 45.0
Peaxi162Scf00201g00133 Petunia axillaris HOM05D006238 ORTHO05D007458 8.8e-09 65.1 234 64.5
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 1.2e-08 64.7 61 45.9
Sc10g0009770 Simmondsia chinensis HOM05D006238 ORTHO05D007458 1.2e-08 64.7 42 73.8
AagrBONN_evm.TU.Sc2ySwM_228.749 Anthoceros agrestis HOM05D006395 ORTHO05D007894 2.0e-08 63.9 62 45.2
Cre12.g503600 Chlamydomonas reinhardtii HOM05D006238 ORTHO05D007458 3.3e-08 63.2 62 43.5
CBR_g52452 Chara braunii HOM05D006395 ORTHO05D007458 9.7e-08 61.6 62 43.5
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 9.7e-08 61.6 31 93.5
AUR62021591 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.3e-07 61.2 55 58.2
CDE10G0764 Ceratophyllum demersum HOM05D000773 ORTHO05D000588 2.8e-07 60.1 41 73.2
PRCOL_00001761 Prasinoderma coloniale HOM05D006238 ORTHO05D007458 3.1e-06 56.6 60 40.0
QL10p018168 Quercus lobata HOM05D006238 ORTHO05D007458 7.0e-06 55.5 51 51.0


User provided reference genes

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