Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 3.5e-67 258.1 122 100.0
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 1.1e-41 173.3 122 64.8
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 1.5e-41 172.9 122 64.8
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 1.5e-41 172.9 122 64.8
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 3.3e-41 171.8 122 63.1
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 3.3e-41 171.8 122 64.8
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 5.6e-41 171.0 122 63.9
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 1.2e-40 169.9 122 64.8
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 1.2e-40 169.9 122 64.8
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 2.8e-40 168.7 122 63.1
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 5.2e-39 164.5 119 61.3
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 1.2e-38 163.3 124 61.3
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 2.6e-38 162.2 120 60.0
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 7.6e-38 160.6 122 59.8
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 1.3e-37 159.8 122 64.8
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 6.4e-37 157.5 120 59.2
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 6.0e-35 151.0 120 55.0
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 3.0e-34 148.7 109 63.3
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 5.1e-34 147.9 120 60.0
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 1.1e-33 146.7 120 54.2
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 8.1e-32 140.6 120 54.2
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 1.8e-31 139.4 105 63.8
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 1.2e-30 136.7 120 55.8
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 5.8e-30 134.4 120 56.7
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 7.6e-30 134.0 120 55.0
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 1.7e-29 132.9 120 54.2
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 1.7e-29 132.9 122 51.6
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 1.7e-29 132.9 120 53.3
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 2.2e-29 132.5 120 55.0
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 2.2e-29 132.5 120 50.8
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 3.8e-29 131.7 120 53.3
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 3.8e-29 131.7 127 51.2
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 4.9e-29 131.3 128 50.0
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 4.9e-29 131.3 128 50.0
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 1.9e-28 129.4 120 52.5
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 1.9e-28 129.4 120 52.5
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 3.2e-28 128.6 118 48.3
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 3.2e-28 128.6 120 52.5
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 3.2e-28 128.6 118 48.3
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 5.4e-28 127.9 119 52.1
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 7.1e-28 127.5 120 51.7
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 7.1e-28 127.5 120 53.3
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 7.1e-28 127.5 120 48.3
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 9.3e-28 127.1 120 51.7
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 1.2e-27 126.7 120 49.2
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 1.6e-27 126.3 120 50.8
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 2.1e-27 125.9 119 50.4
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.1e-27 125.9 111 54.1
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 4.6e-27 124.8 120 49.2
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 4.6e-27 124.8 118 52.5
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 4.6e-27 124.8 128 49.2
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 6.0e-27 124.4 120 52.5
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 7.8e-27 124.0 118 44.1
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.3e-26 123.2 111 53.2
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 1.7e-26 122.9 120 52.5
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 1.7e-26 122.9 128 49.2
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 3.9e-26 121.7 124 51.6
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 3.9e-26 121.7 124 51.6
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 3.9e-26 121.7 124 51.6
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 3.9e-26 121.7 124 51.6
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 3.9e-26 121.7 124 51.6
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 3.9e-26 121.7 124 51.6
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 3.9e-26 121.7 119 48.7
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 3.9e-26 121.7 120 48.3
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 5.1e-26 121.3 120 51.7
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 5.1e-26 121.3 120 51.7
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 5.1e-26 121.3 120 51.7
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 1.1e-25 120.2 116 50.0
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 1.5e-25 119.8 119 49.6
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 1.5e-25 119.8 119 48.7
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 1.9e-25 119.4 124 51.6
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 1.9e-25 119.4 118 50.0
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 2.5e-25 119.0 119 48.7
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 7.3e-25 117.5 124 50.8
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 9.6e-25 117.1 124 50.8
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 9.6e-25 117.1 124 50.8
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 1.3e-24 116.7 119 48.7
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 2.1e-24 115.9 116 53.4
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 2.1e-24 115.9 121 50.4
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 2.8e-24 115.5 119 47.1
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 2.8e-24 115.5 119 48.7
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 4.8e-24 114.8 124 50.8
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 4.8e-24 114.8 127 47.2
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 6.2e-24 114.4 124 49.2
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 1.1e-23 113.6 122 47.5
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 1.1e-23 113.6 129 42.6
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 2.4e-23 112.5 125 45.6
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 3.1e-23 112.1 122 47.5
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 3.1e-23 112.1 113 46.9
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 4.0e-23 111.7 127 46.5
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 5.3e-23 111.3 124 48.4
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 3.4e-22 108.6 119 46.2
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 3.4e-22 108.6 120 44.2
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 7.6e-22 107.5 115 43.5
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 9.9e-22 107.1 119 45.4
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 2.9e-21 105.5 127 43.3
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 6.4e-21 104.4 114 47.4
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 9.3e-20 100.5 127 43.3
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 1.3e-18 96.7 99 44.4
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 1.7e-18 96.3 119 44.5
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 6.6e-18 94.4 97 44.3
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 1.1e-17 93.6 117 42.7
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 2.1e-16 89.4 121 38.8
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 8.1e-16 87.4 68 57.4
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 8.1e-16 87.4 121 38.8
Lj4A21T59 Lonicera japonica HOM05D005168 ORTHO05D006358 1.4e-15 86.7 77 50.6
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 2.2e-13 79.3 66 54.5
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 4.9e-13 78.2 121 33.9
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 1.4e-12 76.6 156 30.1
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 4.2e-12 75.1 62 53.2
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 7.1e-12 74.3 112 34.8
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 9.3e-12 73.9 82 47.6
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 2.1e-11 72.8 54 57.4
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 6.0e-11 71.2 117 35.0
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 7.9e-11 70.9 53 54.7
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 1.0e-10 70.5 59 47.5
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 1.3e-10 70.1 88 43.2
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.5e-09 66.6 92 40.2
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 1.9e-09 66.2 83 43.4
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 3.3e-09 65.5 45 66.7
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 1.3e-08 63.5 65 46.2
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 5.3e-07 58.2 91 39.6
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 1.5e-06 56.6 53 50.9
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 3.4e-06 55.5 87 36.8
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 7.6e-06 54.3 71 39.4
Lsat_1_v5_gn_2_14240 Lactuca sativa HOM05D005168 ORTHO05D006358 7.6e-06 54.3 32 59.4


User provided reference genes

Program Settings