Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 3.2e-104 381.7 189 100.0
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 3.3e-48 195.7 132 68.9
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 3.3e-48 195.7 145 64.1
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 9.5e-48 194.1 136 67.6
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 1.2e-47 193.7 140 65.7
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 1.4e-46 190.3 143 62.9
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 2.4e-46 189.5 139 65.5
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 3.1e-46 189.1 147 63.3
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 3.1e-46 189.1 137 64.2
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 4.0e-46 188.7 139 64.7
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 4.0e-46 188.7 133 70.7
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 1.5e-45 186.8 137 69.3
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 2.6e-45 186.0 142 62.0
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 2.6e-45 186.0 142 62.0
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 2.6e-45 186.0 158 57.6
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 5.8e-45 184.9 145 64.1
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 5.8e-45 184.9 142 62.0
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 5.8e-45 184.9 141 62.4
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 7.6e-45 184.5 137 68.6
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 9.9e-45 184.1 140 64.3
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 1.7e-44 183.3 140 63.6
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 2.2e-44 183.0 137 62.8
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 2.2e-44 183.0 124 68.5
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.9e-44 182.6 144 63.2
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.9e-44 182.6 141 61.7
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 4.9e-44 181.8 136 63.2
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 4.9e-44 181.8 144 63.2
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 4.9e-44 181.8 144 63.2
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 4.9e-44 181.8 139 62.6
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 6.4e-44 181.4 134 64.9
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 6.4e-44 181.4 134 64.9
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 6.4e-44 181.4 140 63.6
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 8.4e-44 181.0 125 68.8
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 1.1e-43 180.6 149 61.1
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 1.9e-43 179.9 131 65.6
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 4.2e-43 178.7 131 64.9
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 5.4e-43 178.3 130 66.2
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 5.4e-43 178.3 168 55.4
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 7.1e-43 177.9 134 64.9
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 9.2e-43 177.6 145 58.6
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 2.1e-42 176.4 138 63.8
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 2.1e-42 176.4 127 68.5
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 2.7e-42 176.0 139 61.2
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 3.5e-42 175.6 122 68.9
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 3.5e-42 175.6 153 60.8
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.5e-42 175.6 131 64.9
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.6e-42 175.3 131 64.1
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 7.8e-42 174.5 136 61.0
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 1.3e-41 173.7 152 57.2
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 1.7e-41 173.3 133 63.2
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 1.7e-41 173.3 130 63.8
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 3.0e-41 172.6 131 63.4
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 3.0e-41 172.6 131 65.6
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 3.9e-41 172.2 152 57.2
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.9e-41 172.2 131 64.1
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 5.1e-41 171.8 129 63.6
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 6.6e-41 171.4 147 58.5
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 8.7e-41 171.0 143 59.4
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 8.7e-41 171.0 146 60.3
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 8.7e-41 171.0 131 64.1
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 1.1e-40 170.6 129 62.8
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.5e-40 170.2 131 64.9
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 1.9e-40 169.9 137 60.6
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 1.9e-40 169.9 132 64.4
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 2.5e-40 169.5 128 64.1
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 4.3e-40 168.7 135 61.5
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 4.3e-40 168.7 146 59.6
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 5.6e-40 168.3 147 57.1
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 7.3e-40 167.9 137 58.4
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.2e-39 167.2 148 56.1
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 1.2e-39 167.2 135 57.8
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 1.6e-39 166.8 150 54.0
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 2.1e-39 166.4 130 60.8
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 2.1e-39 166.4 137 59.1
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 2.8e-39 166.0 134 59.7
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 3.6e-39 165.6 128 62.5
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 3.6e-39 165.6 136 56.6
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 3.6e-39 165.6 129 61.2
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 4.7e-39 165.2 127 62.2
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 6.2e-39 164.9 131 60.3
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 6.2e-39 164.9 131 61.8
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 8.1e-39 164.5 125 64.0
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 1.1e-38 164.1 143 58.0
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 1.1e-38 164.1 143 58.0
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.1e-38 164.1 140 57.9
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.8e-38 163.3 128 61.7
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.8e-38 163.3 128 61.7
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 3.1e-38 162.5 131 60.3
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 3.1e-38 162.5 126 61.1
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 4.0e-38 162.2 151 56.3
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 4.0e-38 162.2 130 60.0
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 5.3e-38 161.8 128 59.4
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 6.9e-38 161.4 130 61.5
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 9.0e-38 161.0 112 70.5
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 2.0e-37 159.8 134 59.0
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 2.0e-37 159.8 221 44.3
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 2.6e-37 159.5 136 54.4
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 2.6e-37 159.5 139 58.3
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 4.4e-37 158.7 149 52.3
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 4.9e-36 155.2 141 55.3
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 1.1e-35 154.1 128 59.4
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 1.9e-35 153.3 146 54.1
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.4e-35 152.9 107 66.4
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 9.3e-35 151.0 131 58.0
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 9.3e-35 151.0 131 58.0
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 9.3e-35 151.0 146 54.8
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 2.7e-34 149.4 131 53.4
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 2.7e-34 149.4 131 57.3
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 2.7e-34 149.4 131 57.3
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 2.7e-34 149.4 131 57.3
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 4.6e-34 148.7 133 56.4
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 6.0e-34 148.3 132 52.3
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 6.6e-33 144.8 133 54.1
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 1.5e-32 143.7 156 50.0
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 4.3e-32 142.1 125 54.4
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 1.3e-31 140.6 156 49.4
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 9.0e-30 134.4 93 68.8
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 5.8e-29 131.7 93 65.6
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 5.8e-29 131.7 106 61.3
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 4.2e-27 125.6 126 47.6
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 2.7e-26 122.9 130 44.6
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 3.9e-25 119.0 135 46.7
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 6.7e-25 118.2 126 42.9
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 8.7e-25 117.9 71 73.2
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 1.9e-24 116.7 143 40.6
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 4.3e-24 115.5 124 47.6
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 4.3e-24 115.5 139 43.9
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 7.4e-24 114.8 130 45.4
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 7.6e-21 104.8 147 38.1
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 1.6e-18 97.1 71 66.2
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 4.6e-18 95.5 71 59.2
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 3.9e-17 92.4 65 69.2
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 1.1e-14 84.3 156 34.0
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 3.1e-14 82.8 70 61.4
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 3.4e-13 79.3 75 54.7
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 2.9e-12 76.3 68 58.8
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 3.8e-12 75.9 63 58.7
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 4.2e-11 72.4 140 32.1


User provided reference genes

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