Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 7.2e-116 420.6 218 100.0
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.4e-41 172.6 223 47.1
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 6.1e-38 161.8 222 46.8
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 5.1e-37 158.7 224 45.5
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 1.1e-36 157.5 217 44.7
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 9.7e-36 154.5 229 42.8
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 2.2e-35 153.3 199 46.2
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 1.8e-34 150.2 231 43.7
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 4.1e-34 149.1 218 44.5
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 9.1e-34 147.9 228 42.5
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 1.5e-33 147.1 231 43.3
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 2.0e-33 146.7 224 43.3
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 2.6e-33 146.4 225 42.7
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 2.2e-32 143.3 224 41.1
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 3.8e-32 142.5 223 43.0
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 7.2e-31 138.3 227 41.9
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 1.2e-30 137.5 224 41.1
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 2.1e-30 136.7 222 41.0
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 1.8e-29 133.7 217 39.6
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 2.3e-29 133.3 222 40.1
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 2.3e-29 133.3 225 41.8
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 3.0e-29 132.9 225 38.2
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 1.1e-28 131.0 224 41.1
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 1.1e-28 131.0 224 42.9
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.0e-28 130.2 222 39.6
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 2.6e-28 129.8 223 40.8
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.6e-28 129.8 223 40.8
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 4.4e-28 129.0 224 40.2
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 7.4e-28 128.3 220 39.5
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 4.8e-27 125.6 215 40.0
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 6.3e-27 125.2 221 39.4
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 1.1e-26 124.4 218 38.1
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 1.1e-26 124.4 217 40.1
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.8e-26 123.6 224 39.3
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 1.8e-26 123.6 218 41.3
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 2.4e-26 123.2 217 37.3
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 2.4e-26 123.2 217 39.6
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 2.4e-26 123.2 218 38.5
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.1e-26 122.5 223 38.1
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 9.1e-26 121.3 218 40.4
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 9.1e-26 121.3 218 40.4
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 9.1e-26 121.3 222 38.7
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 9.1e-26 121.3 223 37.7
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 2.0e-25 120.2 223 39.0
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 2.0e-25 120.2 221 40.7
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.6e-25 119.8 218 40.4
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.5e-25 119.0 221 37.6
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 5.9e-25 118.6 223 37.2
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 7.7e-25 118.2 216 40.3
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.2e-24 116.7 218 39.4
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 2.9e-24 116.3 220 38.6
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 1.9e-23 113.6 221 39.8
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 5.5e-23 112.1 223 38.6
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 7.2e-23 111.7 216 36.1
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 1.6e-22 110.5 227 37.4
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 2.1e-22 110.2 197 38.1
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 2.1e-22 110.2 197 38.1
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 2.1e-22 110.2 222 36.0
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 2.7e-22 109.8 223 36.8
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 2.7e-22 109.8 223 36.8
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 3.6e-22 109.4 225 37.8
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 4.7e-22 109.0 222 37.4
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 6.1e-22 108.6 189 40.2
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 1.4e-21 107.5 224 36.6
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 1.4e-21 107.5 223 35.0
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.8e-21 107.1 218 37.2
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 2.3e-21 106.7 221 33.9
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 5.2e-21 105.5 224 37.5
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 1.5e-20 104.0 224 36.6
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 2.0e-20 103.6 198 36.9
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 2.0e-20 103.6 218 36.7
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 2.6e-20 103.2 226 35.0
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 2.6e-20 103.2 226 35.0
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 3.3e-20 102.8 221 33.9
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 4.4e-20 102.4 119 47.1
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 4.4e-20 102.4 169 39.1
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 4.4e-20 102.4 98 55.1
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 5.7e-20 102.1 220 35.9
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 7.4e-20 101.7 224 34.4
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 7.4e-20 101.7 224 34.8
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 7.4e-20 101.7 224 34.8
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 9.7e-20 101.3 222 34.7
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 9.7e-20 101.3 198 34.3
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 2.8e-19 99.8 108 49.1
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 2.8e-19 99.8 222 35.1
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 3.7e-19 99.4 217 35.0
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 4.8e-19 99.0 224 34.8
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 4.8e-19 99.0 222 33.3
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 8.2e-19 98.2 226 36.7
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 3.1e-18 96.3 224 34.4
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 4.1e-18 95.9 315 29.5
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 7.0e-18 95.1 226 36.3
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 9.1e-18 94.7 221 34.8
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 2.0e-17 93.6 239 33.5
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 2.0e-17 93.6 118 45.8
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 2.0e-17 93.6 169 39.1
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 2.6e-17 93.2 217 34.1
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 2.6e-17 93.2 191 36.6
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 2.6e-17 93.2 170 40.0
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 2.6e-17 93.2 120 47.5
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 1.0e-16 91.3 239 34.3
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.0e-16 91.3 115 44.3
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 1.0e-16 91.3 212 36.8
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 1.7e-16 90.5 185 35.7
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.8e-16 89.4 83 55.4
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 8.5e-16 88.2 211 37.0
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 4.2e-15 85.9 216 35.2
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 3.6e-14 82.8 217 31.8
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 4.4e-12 75.9 77 49.4
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 7.5e-12 75.1 95 47.4
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 8.2e-11 71.6 229 29.3
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 8.2e-11 71.6 222 30.6
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 1.8e-10 70.5 215 27.9
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 1.8e-10 70.5 177 36.7
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 3.5e-09 66.2 216 26.9
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 4.5e-09 65.9 84 46.4
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 5.9e-09 65.5 84 46.4
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 2.9e-08 63.2 192 29.2
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 5.0e-08 62.4 46 63.0
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 6.5e-08 62.0 46 60.9
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 1.1e-07 61.2 56 51.8
Lju170C28T1 Lonicera japonica HOM05D004413 ORTHO05D005199 1.9e-07 60.5 62 56.5
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 5.5e-07 58.9 46 60.9
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 5.5e-07 58.9 46 60.9
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 1.6e-06 57.4 120 35.8
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 2.1e-06 57.0 36 72.2


User provided reference genes

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