Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 0.0e+00 1666.4 923 100.0
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 0.0e+00 1411.4 924 87.1
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 8.4e-73 279.6 702 37.0
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 5.3e-67 260.4 911 31.3
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 1.7e-65 255.4 936 32.8
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.4e-62 245.7 470 42.6
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 1.1e-61 242.7 702 35.6
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 6.9e-59 233.4 748 35.4
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 1.0e-54 219.5 930 30.6
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 2.3e-54 218.4 954 31.3
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 5.7e-53 213.8 980 31.2
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 9.7e-53 213.0 766 34.5
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 1.9e-48 198.7 962 29.9
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 1.5e-45 189.1 933 29.4
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 9.7e-45 186.4 916 28.9
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 6.3e-44 183.7 935 29.9
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.1e-43 183.0 959 28.1
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 5.3e-43 180.6 747 31.7
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 1.6e-42 179.1 927 29.4
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 5.9e-42 177.2 990 28.7
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 7.2e-40 170.2 636 32.9
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.2e-39 169.5 544 32.4
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 2.1e-39 168.7 915 28.0
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 6.1e-39 167.2 1035 29.3
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 1.4e-38 166.0 710 31.1
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 5.2e-38 164.1 942 28.7
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 6.7e-38 163.7 605 32.7
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 2.0e-37 162.2 532 32.9
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 3.3e-37 161.4 753 30.9
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 1.3e-36 159.5 754 30.6
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 2.8e-36 158.3 705 31.6
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 4.8e-36 157.5 804 29.5
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 2.4e-35 155.2 812 27.7
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 2.0e-34 152.1 521 33.0
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 7.7e-34 150.2 873 28.8
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 1.0e-33 149.8 776 30.8
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 1.0e-33 149.8 998 27.2
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 1.7e-33 149.1 449 35.0
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 2.9e-33 148.3 990 26.8
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 3.8e-33 147.9 623 31.0
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 2.5e-32 145.2 402 35.8
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 6.1e-31 140.6 743 28.1
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 1.0e-30 139.8 726 30.3
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 4.0e-30 137.9 937 26.7
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 5.2e-30 137.5 695 29.2
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 6.8e-30 137.1 467 30.6
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 2.6e-29 135.2 479 34.2
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 3.4e-29 134.8 325 35.1
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 9.8e-29 133.3 547 33.8
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 1.3e-28 132.9 465 31.6
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 1.3e-28 132.9 503 33.8
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 1.3e-28 132.9 548 31.4
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 1.7e-28 132.5 515 31.7
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 2.2e-28 132.1 242 44.6
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 8.3e-28 130.2 690 31.3
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 2.4e-27 128.6 930 26.5
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 3.1e-27 128.3 495 33.5
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 3.1e-27 128.3 542 30.4
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 3.1e-27 128.3 567 31.9
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 9.1e-27 126.7 373 33.5
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 9.1e-27 126.7 467 33.2
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 2.0e-26 125.6 380 32.6
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 2.7e-26 125.2 303 36.6
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.5e-26 124.8 680 31.6
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 7.7e-26 123.6 531 31.3
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.3e-25 122.1 993 27.5
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 5.0e-25 120.9 266 35.7
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 6.6e-25 120.6 887 27.4
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 8.6e-25 120.2 362 36.2
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.1e-24 119.8 287 36.2
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 1.9e-24 119.0 485 30.9
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.5e-24 118.6 1002 27.0
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 7.2e-24 117.1 430 33.3
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 2.1e-23 115.5 621 30.9
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 8.0e-23 113.6 723 27.7
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 1.4e-22 112.8 497 27.4
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 2.3e-22 112.1 709 26.4
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 1.2e-21 109.8 335 33.4
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 1.2e-21 109.8 239 41.4
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 2.6e-21 108.6 381 30.2
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 4.4e-21 107.8 369 32.5
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 4.4e-21 107.8 389 31.6
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 4.4e-21 107.8 389 31.6
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 2.2e-20 105.5 253 36.4
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 2.2e-20 105.5 253 36.4
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 2.2e-20 105.5 253 36.4
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 3.1e-19 101.7 277 29.6
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 3.1e-19 101.7 322 35.1
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 4.1e-19 101.3 377 32.4
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 5.4e-19 100.9 577 29.8
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 5.4e-19 100.9 376 35.4
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 7.0e-19 100.5 634 26.2
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 1.2e-18 99.8 426 30.3
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 4.5e-18 97.8 348 31.3
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 7.8e-18 97.1 314 34.1
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.0e-17 96.7 442 28.1
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.7e-17 95.9 455 27.5
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 1.7e-17 95.9 223 42.6
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 3.8e-17 94.7 295 35.6
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 2.5e-16 92.0 508 31.1
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 2.5e-16 92.0 435 33.1
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 7.3e-16 90.5 116 49.1
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 9.5e-16 90.1 405 28.9
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 1.6e-15 89.4 1032 24.2
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 4.7e-15 87.8 741 26.3
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 6.1e-15 87.4 582 29.0
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.0e-14 86.7 123 54.5
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 5.2e-14 84.3 281 33.1
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 5.2e-14 84.3 73 53.4
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 5.8e-13 80.9 285 27.7
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 5.8e-13 80.9 60 63.3
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 1.7e-12 79.3 619 23.9
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 8.3e-12 77.0 165 33.9
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 8.3e-12 77.0 198 39.9
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 1.1e-11 76.6 136 48.5
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 7.0e-11 73.9 60 58.3
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 7.0e-11 73.9 361 28.8
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 1.0e-09 70.1 971 22.7
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 2.3e-09 68.9 670 24.2
AUR62029046 Chenopodium quinoa HOM05D036879 ORTHO05D005895 3.3e-08 65.1 384 26.8
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 9.5e-08 63.5 326 30.7
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 1.1e-06 60.1 59 54.2
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 1.1e-06 60.1 59 54.2
Hma1.2p1_1540F.1_g289660 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.4e-06 59.7 162 29.6
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 2.3e-06 58.9 388 27.3


User provided reference genes

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