Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 5.0e-202 707.6 366 100.0
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.7e-123 446.0 334 72.8
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 2.5e-121 439.5 386 64.8
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 9.6e-121 437.6 386 64.0
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.3e-120 437.2 377 65.0
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.1e-120 436.4 388 65.2
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 6.9e-119 431.4 332 71.1
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.6e-118 429.5 389 63.8
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 3.4e-118 429.1 384 61.7
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 2.2e-117 426.4 401 61.8
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 6.4e-117 424.9 390 61.8
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 8.4e-117 424.5 325 69.8
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 3.2e-116 422.5 380 63.4
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 5.5e-116 421.8 388 62.9
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 5.5e-116 421.8 389 60.7
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.2e-115 420.6 352 65.6
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 1.2e-115 420.6 340 68.2
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.6e-115 420.2 380 63.2
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 2.1e-115 419.9 300 73.3
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 7.9e-115 417.9 386 60.9
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 6.7e-114 414.8 341 65.1
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 8.7e-114 414.5 387 62.3
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.1e-113 414.1 390 62.3
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 1.1e-113 414.1 403 60.3
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 4.3e-113 412.1 386 61.9
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 5.6e-113 411.8 388 62.4
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 7.4e-113 411.4 362 65.7
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 7.4e-113 411.4 385 62.3
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.4e-113 411.4 385 62.3
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 2.1e-112 409.8 366 62.0
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.8e-112 409.5 385 62.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.2e-112 408.3 385 63.1
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 8.1e-112 407.9 384 60.7
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 8.1e-112 407.9 387 61.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.4e-111 407.1 341 66.9
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.4e-111 407.1 387 60.7
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.8e-111 406.8 387 60.7
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 2.4e-111 406.4 385 62.6
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.4e-111 406.4 330 67.6
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 3.1e-111 406.0 342 64.9
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 3.1e-111 406.0 290 74.1
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 9.0e-111 404.4 364 62.4
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 2.0e-110 403.3 322 67.1
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.6e-110 402.9 324 67.3
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 5.8e-110 401.7 384 60.4
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 7.6e-110 401.4 270 76.7
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.2e-109 399.8 259 79.2
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 2.9e-109 399.4 391 60.9
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.9e-109 399.4 330 64.8
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 3.8e-109 399.1 355 63.1
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 6.5e-109 398.3 335 65.7
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 8.4e-109 397.9 385 59.7
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.4e-108 397.1 335 66.0
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.4e-108 397.1 335 66.0
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.4e-108 397.1 334 64.4
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.4e-108 397.1 327 66.7
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.9e-108 396.7 389 62.0
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.9e-108 396.7 355 62.3
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.5e-108 396.4 338 65.4
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 4.2e-108 395.6 385 59.5
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.1e-108 394.8 260 78.8
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 9.3e-108 394.4 322 66.1
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.2e-107 394.0 392 58.4
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.6e-107 393.7 345 64.6
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.1e-107 393.3 268 75.7
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 7.9e-107 391.3 309 68.0
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-106 390.6 271 74.2
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.3e-106 390.6 387 58.9
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 5.1e-106 388.7 324 64.8
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 6.7e-106 388.3 323 65.3
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 6.7e-106 388.3 328 65.2
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 8.7e-106 387.9 269 74.7
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 8.7e-106 387.9 294 69.4
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.1e-105 387.5 376 59.3
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 3.3e-105 386.0 271 72.7
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.3e-104 384.0 337 63.8
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 5.9e-102 375.2 315 65.1
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 2.2e-101 373.2 370 59.2
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.4e-100 370.5 308 64.3
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 2.5e-100 369.8 247 76.9
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 3.2e-100 369.4 280 70.7
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.2e-100 369.4 344 58.4
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 9.3e-100 367.9 318 64.2
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 1.3e-98 364.0 331 62.8
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.9e-97 360.1 243 78.6
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 5.7e-97 358.6 271 68.3
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.3e-96 357.5 315 62.9
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 2.8e-96 356.3 324 62.7
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.7e-96 355.9 420 53.3
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 2.6e-94 349.7 270 68.9
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 9.4e-92 341.3 321 60.1
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 2.1e-91 340.1 476 46.2
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 1.4e-90 337.4 481 45.3
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.4e-90 337.4 271 66.4
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.0e-90 336.3 336 58.9
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.1e-87 327.8 271 62.7
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.4e-87 327.4 305 60.0
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 6.9e-87 325.1 369 54.5
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 4.5e-86 322.4 364 53.3
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 3.0e-82 309.7 403 48.9
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.2e-82 308.9 215 74.0
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.8e-80 303.1 207 76.3
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.2e-78 297.7 211 73.9
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 6.5e-77 292.0 178 83.1
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 2.6e-73 280.0 268 56.0
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.3e-72 277.7 303 54.8
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 4.8e-72 275.8 263 56.3
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 1.3e-69 267.7 289 56.7
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 6.5e-69 265.4 396 46.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 2.3e-66 256.9 177 70.6
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 5.2e-66 255.8 410 44.6
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.2e-65 254.6 269 52.8
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.3e-64 251.1 258 53.1
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 5.5e-60 235.7 147 78.2
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 9.8e-57 224.9 262 46.6
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.7e-56 224.2 129 86.8
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.7e-56 224.2 272 48.9
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.3e-53 213.8 136 78.7
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 5.4e-47 192.6 115 86.1
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.6e-46 191.0 196 54.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.0e-42 178.3 126 73.8
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.6e-41 173.7 108 77.8
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.4e-33 146.4 251 34.7
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 6.2e-27 125.9 175 41.7
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 4.9e-24 116.3 90 66.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-22 110.5 159 37.1
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 4.9e-16 89.7 82 65.9
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.5e-12 77.4 152 39.5
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 1.6e-11 74.7 41 90.2
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 2.4e-10 70.9 38 92.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 7.6e-09 65.9 244 25.8
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 1.7e-08 64.7 51 64.7
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 3.8e-08 63.5 36 83.3


User provided reference genes

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