Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 2.0e-143 512.7 305 100.0
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 2.8e-33 146.7 299 38.1
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 1.4e-32 144.4 299 37.8
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 3.8e-30 136.3 300 36.3
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.9e-29 134.0 301 35.5
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 2.1e-28 130.6 306 36.9
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 1.0e-27 128.3 287 36.6
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 5.7e-26 122.5 302 35.4
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 1.3e-25 121.3 285 35.1
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 1.7e-25 120.9 311 42.4
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 1.1e-24 118.2 306 33.0
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.1e-24 118.2 301 32.2
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 1.8e-24 117.5 287 34.1
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 3.1e-24 116.7 291 35.7
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 9.1e-24 115.2 310 34.2
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.2e-23 114.8 301 42.9
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 1.6e-23 114.4 305 31.8
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.5e-23 113.2 295 43.7
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 5.9e-23 112.5 304 39.8
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 7.7e-23 112.1 287 30.7
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 3.8e-22 109.8 309 31.7
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 6.5e-22 109.0 282 32.6
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 8.5e-22 108.6 307 36.2
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.1e-21 108.2 300 32.3
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 1.1e-21 108.2 301 32.2
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 1.5e-21 107.8 294 34.7
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 1.9e-21 107.5 298 32.6
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 5.5e-21 105.9 282 35.1
DCAR_021655 Daucus carota HOM05D002201 ORTHO05D007560 1.2e-20 104.8 70 74.3
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 1.6e-20 104.4 287 31.4
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 2.1e-20 104.0 322 38.8
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 2.7e-20 103.6 300 40.0
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 2.7e-20 103.6 286 32.2
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 2.7e-20 103.6 307 39.4
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.1e-20 102.4 304 38.2
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 8.0e-20 102.1 284 30.6
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 2.3e-19 100.5 303 38.9
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 2.3e-19 100.5 308 39.3
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 5.2e-19 99.4 325 36.9
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 8.8e-19 98.6 284 32.4
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 1.2e-18 98.2 296 32.1
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 1.2e-18 98.2 301 29.9
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 1.5e-18 97.8 323 39.0
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 2.0e-18 97.4 304 34.5
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.0e-18 97.4 270 37.4
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.0e-18 97.4 270 37.4
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 1.7e-17 94.4 307 29.3
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 4.8e-17 92.8 301 39.9
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 4.8e-17 92.8 297 30.0
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.3e-17 92.4 174 37.9
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.3e-17 92.4 302 36.4
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 8.2e-17 92.0 308 29.9
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 8.2e-17 92.0 116 50.0
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 8.2e-17 92.0 297 31.0
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.1e-16 91.7 253 33.6
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 4.1e-16 89.7 302 29.8
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 5.3e-16 89.4 283 29.3
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 9.1e-16 88.6 285 33.3
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 2.0e-15 87.4 294 27.6
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 3.5e-15 86.7 301 28.9
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 5.9e-15 85.9 267 30.3
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 7.7e-15 85.5 288 33.0
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 1.0e-14 85.1 280 31.8
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 1.0e-14 85.1 301 30.9
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-14 84.0 291 37.5
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.2e-14 84.0 291 37.5
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 2.2e-14 84.0 292 36.6
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 3.8e-14 83.2 293 35.5
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 3.8e-14 83.2 83 59.0
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 3.8e-14 83.2 301 28.9
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 3.8e-14 83.2 292 39.7
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 5.0e-14 82.8 285 28.1
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 6.5e-14 82.4 298 32.2
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 2.5e-13 80.5 301 35.2
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 2.5e-13 80.5 303 31.7
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 2.5e-13 80.5 298 38.6
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 3.2e-13 80.1 293 34.8
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 3.2e-13 80.1 302 38.1
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 3.2e-13 80.1 283 29.7
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 4.2e-13 79.7 302 37.4
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 1.2e-12 78.2 283 38.2
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 2.1e-12 77.4 283 30.4
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.1e-12 77.4 289 38.4
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 4.7e-12 76.3 294 35.4
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 4.7e-12 76.3 323 29.7
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 8.0e-12 75.5 273 36.3
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 1.4e-11 74.7 298 38.6
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.4e-11 74.7 117 44.4
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 2.3e-11 73.9 275 29.1
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 2.3e-11 73.9 293 37.9
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 4.0e-11 73.2 292 33.6
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 5.2e-11 72.8 291 32.3
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 5.2e-11 72.8 286 25.9
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.8e-11 72.4 81 51.9
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 6.8e-11 72.4 284 37.0
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 8.8e-11 72.0 117 41.0
HanXRQChr16g0511321 Helianthus annuus HOM05D003759 ORTHO05D004149 1.5e-10 71.2 72 55.6
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.5e-10 71.2 299 37.1
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 2.0e-10 70.9 278 28.4
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 2.6e-10 70.5 262 28.6
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 4.4e-10 69.7 276 28.3
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 4.4e-10 69.7 276 28.3
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 5.7e-10 69.3 276 27.2
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 5.7e-10 69.3 276 27.2
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 5.7e-10 69.3 148 38.5
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 7.5e-10 68.9 289 36.7
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 7.5e-10 68.9 276 28.3
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 9.8e-10 68.6 266 35.3
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 9.8e-10 68.6 111 44.1
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 1.3e-09 68.2 127 37.0
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 2.2e-09 67.4 303 37.3
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.8e-09 67.0 271 29.9
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 2.8e-09 67.0 304 26.3
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 3.7e-09 66.6 142 34.5
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.7e-09 66.6 369 31.4
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.7e-09 66.6 369 31.4
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 4.8e-09 66.2 274 27.4
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 4.8e-09 66.2 274 27.4
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.8e-09 66.2 105 41.0
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 6.3e-09 65.9 276 36.6
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 8.3e-09 65.5 295 26.4
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 1.1e-08 65.1 123 39.0
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 1.4e-08 64.7 303 35.3
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.8e-08 64.3 111 37.8
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.8e-08 64.3 105 41.0
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 3.1e-08 63.5 290 27.9
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 3.1e-08 63.5 134 35.8
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 4.1e-08 63.2 303 36.6
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 4.1e-08 63.2 114 41.2
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 4.1e-08 63.2 297 36.4
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 4.1e-08 63.2 77 51.9
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 5.4e-08 62.8 290 27.9
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 5.4e-08 62.8 278 26.6
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 5.4e-08 62.8 278 26.6
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 5.4e-08 62.8 278 26.6
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 5.4e-08 62.8 284 26.4
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 5.4e-08 62.8 93 47.3
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 7.0e-08 62.4 284 26.4
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 7.0e-08 62.4 293 35.2
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 7.0e-08 62.4 108 38.0
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 9.1e-08 62.0 290 27.2
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 1.6e-07 61.2 121 38.0
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.6e-07 61.2 98 41.8
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.6e-07 61.2 98 41.8
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 1.6e-07 61.2 127 34.6
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 2.0e-07 60.8 281 28.1
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 2.0e-07 60.8 286 28.0
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 2.0e-07 60.8 260 27.7
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 2.7e-07 60.5 289 27.0
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 2.7e-07 60.5 280 27.9
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 2.7e-07 60.5 289 24.6
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 2.7e-07 60.5 286 26.2
FAN23G1979 Fragaria x ananassa HOM05D003759 ORTHO05D004149 2.7e-07 60.5 303 35.0
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 3.5e-07 60.1 131 35.1
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 3.5e-07 60.1 282 36.2
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 4.5e-07 59.7 297 24.9
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 4.5e-07 59.7 267 27.3
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 4.5e-07 59.7 91 44.0
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 5.9e-07 59.3 296 24.7
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 5.9e-07 59.3 90 40.0
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 5.9e-07 59.3 128 31.2
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 7.7e-07 58.9 105 40.0
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 7.7e-07 58.9 105 40.0
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 7.7e-07 58.9 240 37.5
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 7.7e-07 58.9 141 31.9
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 7.7e-07 58.9 264 37.5
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 1.0e-06 58.5 286 27.6
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.7e-06 57.8 263 27.8
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.7e-06 57.8 131 34.4
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.7e-06 57.8 117 36.8
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 2.9e-06 57.0 303 35.0
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 3.8e-06 56.6 101 38.6
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 3.8e-06 56.6 118 36.4
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 3.8e-06 56.6 72 43.1
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 6.5e-06 55.8 113 37.2
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 8.6e-06 55.5 136 36.0


User provided reference genes

Program Settings