Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 3.4e-92 341.7 174 100.0
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 3.6e-49 198.7 147 70.1
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 6.7e-48 194.5 161 64.0
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.0e-47 193.0 134 70.9
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 5.7e-47 191.4 134 70.1
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.3e-46 190.3 179 61.5
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.7e-46 189.9 125 74.4
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 1.7e-46 189.9 123 73.2
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 2.8e-46 189.1 142 67.6
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 2.8e-46 189.1 174 59.2
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 4.8e-46 188.3 143 64.3
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 4.8e-46 188.3 174 58.6
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 8.2e-46 187.6 167 60.5
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 8.2e-46 187.6 137 69.3
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 1.1e-45 187.2 148 60.8
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.1e-45 187.2 162 61.1
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.4e-45 186.8 128 71.9
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 4.1e-45 185.3 159 61.0
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 5.3e-45 184.9 174 58.0
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 7.0e-45 184.5 134 68.7
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 7.0e-45 184.5 154 62.3
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 7.0e-45 184.5 126 69.8
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 7.0e-45 184.5 174 57.5
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 9.1e-45 184.1 126 69.0
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 9.1e-45 184.1 174 58.0
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 1.2e-44 183.7 135 70.4
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 2.0e-44 183.0 109 78.9
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 2.0e-44 183.0 154 61.7
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.0e-44 183.0 122 70.5
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 2.0e-44 183.0 131 67.9
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 2.0e-44 183.0 125 69.6
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 4.5e-44 181.8 154 61.0
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 4.5e-44 181.8 173 61.3
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 5.9e-44 181.4 151 61.6
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 5.9e-44 181.4 125 69.6
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 5.9e-44 181.4 125 69.6
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 5.9e-44 181.4 125 69.6
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 5.9e-44 181.4 165 59.4
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 5.9e-44 181.4 144 63.2
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 7.7e-44 181.0 159 61.6
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 7.7e-44 181.0 173 57.2
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.0e-43 180.6 157 59.9
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.0e-43 180.6 145 64.1
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 1.0e-43 180.6 130 70.0
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 1.7e-43 179.9 159 61.0
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.7e-43 179.9 160 61.2
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 1.7e-43 179.9 173 58.4
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-43 179.9 146 65.1
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 2.9e-43 179.1 174 59.2
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 2.9e-43 179.1 129 66.7
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 3.8e-43 178.7 143 62.9
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 3.8e-43 178.7 176 57.4
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 6.5e-43 177.9 140 64.3
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 6.5e-43 177.9 139 62.6
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 8.5e-43 177.6 160 56.9
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.9e-42 176.4 173 61.3
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 1.9e-42 176.4 147 65.3
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.9e-42 176.4 109 75.2
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.2e-42 175.6 123 71.5
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 4.2e-42 175.3 162 57.4
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 4.2e-42 175.3 191 53.9
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 1.2e-41 173.7 110 77.3
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 2.7e-41 172.6 168 58.9
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 3.6e-41 172.2 141 64.5
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 4.7e-41 171.8 163 55.8
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 6.1e-41 171.4 169 52.7
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 6.1e-41 171.4 162 56.8
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 6.1e-41 171.4 111 73.9
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 3.0e-40 169.1 157 59.2
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 3.0e-40 169.1 144 63.2
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 4.0e-40 168.7 123 69.1
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 5.2e-40 168.3 109 75.2
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 8.8e-40 167.5 108 75.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 5.7e-39 164.9 115 73.0
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 2.2e-38 162.9 103 72.8
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 8.2e-38 161.0 102 71.6
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.2e-36 157.1 98 72.4
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.2e-36 157.1 98 72.4
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 1.2e-36 157.1 167 56.3
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 7.7e-36 154.5 108 69.4
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 2.9e-35 152.5 157 54.8
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 6.5e-35 151.4 165 52.1
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.1e-34 150.6 176 48.3
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.9e-34 149.8 168 50.0
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 2.5e-34 149.4 109 66.1
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 2.5e-34 149.4 150 58.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 2.5e-34 149.4 177 50.8
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 4.2e-34 148.7 104 70.2
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 9.4e-34 147.5 131 58.8
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.6e-33 146.7 155 50.3
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 6.1e-33 144.8 168 49.4
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 2.3e-32 142.9 127 56.7
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 7.5e-31 137.9 174 45.4
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 2.2e-30 136.3 101 70.3
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 3.7e-30 135.6 110 63.6
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.7e-27 126.7 87 70.1
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 5.5e-26 121.7 97 60.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 3.6e-17 92.4 74 62.2
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.5e-12 75.9 99 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 1.5e-07 60.5 132 31.1
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 4.4e-07 58.9 69 44.9
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 5.8e-07 58.5 127 31.5
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 1.7e-06 57.0 38 65.8
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 1.7e-06 57.0 38 65.8


User provided reference genes

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