Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.3e-249 865.9 429 100.0
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.3e-249 865.9 429 100.0
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 4.1e-179 631.7 427 71.2
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 7.7e-178 627.5 424 72.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.7e-177 626.3 440 70.7
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.7e-177 626.3 422 71.3
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 8.5e-177 624.0 425 71.1
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 9.4e-176 620.5 418 71.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.2e-175 620.2 418 71.5
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 4.7e-175 618.2 418 71.8
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.0e-174 617.1 424 71.7
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 3.0e-174 615.5 439 68.3
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 6.7e-174 614.4 432 69.0
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.5e-173 613.2 432 69.0
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 1.5e-173 613.2 428 68.9
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.5e-173 613.2 423 70.9
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.5e-173 613.2 420 71.7
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.6e-173 612.5 418 70.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 4.4e-173 611.7 420 69.0
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 5.7e-173 611.3 419 70.4
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 7.4e-173 610.9 425 69.9
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.7e-172 609.8 421 70.1
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.2e-172 609.4 426 69.2
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.8e-172 609.0 456 66.4
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 3.7e-172 608.6 425 69.6
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.1e-171 607.1 420 70.7
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.4e-171 606.7 425 69.4
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.8e-171 606.3 422 70.4
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.3e-171 604.7 425 69.4
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 9.1e-171 604.0 418 70.3
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.2e-170 603.6 424 69.8
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.5e-170 603.2 428 68.0
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 2.6e-170 602.4 418 70.8
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.6e-170 602.4 419 69.7
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 4.5e-170 601.7 426 69.5
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 4.5e-170 601.7 428 68.0
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 4.5e-170 601.7 420 70.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.7e-169 599.7 420 68.1
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.7e-169 599.7 421 67.7
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 4.2e-168 595.1 425 68.7
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 5.5e-168 594.7 426 68.3
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 9.4e-168 594.0 428 66.8
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.6e-167 593.2 424 68.9
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 2.7e-167 592.4 422 69.2
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 2.7e-167 592.4 438 68.0
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 6.1e-167 591.3 412 70.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 8.0e-167 590.9 424 68.4
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.8e-166 589.7 443 65.9
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.8e-166 589.7 424 69.3
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.3e-166 589.3 420 67.4
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 2.3e-166 589.3 424 67.9
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.1e-165 587.0 420 68.1
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.0e-165 586.3 432 66.9
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.0e-165 586.3 432 66.9
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.6e-165 585.9 420 68.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.3e-165 585.5 419 66.8
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.3e-165 585.5 420 68.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 4.4e-165 585.1 420 67.9
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 9.7e-165 583.9 458 63.3
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.7e-164 582.0 421 66.3
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 4.8e-164 581.6 430 67.2
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.4e-163 580.1 418 68.4
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.1e-163 578.9 421 66.0
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 1.6e-162 576.6 419 67.3
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 2.0e-162 576.2 420 66.9
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.0e-162 576.2 419 67.5
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 5.9e-162 574.7 424 67.9
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.9e-162 574.7 420 66.2
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 1.3e-161 573.5 433 65.1
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-161 572.4 432 66.2
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 8.5e-161 570.9 417 65.5
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.1e-160 570.5 423 66.7
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.9e-160 569.7 420 65.7
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 2.5e-160 569.3 418 65.3
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 4.2e-160 568.5 418 65.6
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 4.2e-160 568.5 431 65.9
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 5.5e-160 568.2 420 67.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 7.2e-160 567.8 431 65.9
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.6e-159 566.6 424 64.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 4.7e-159 565.1 422 65.4
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.0e-159 564.3 420 65.5
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.4e-158 563.5 424 65.8
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.4e-158 563.5 424 65.8
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.4e-158 563.5 466 59.9
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 2.3e-158 562.8 422 65.4
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 2.3e-158 562.8 424 65.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 2.3e-158 562.8 424 65.8
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.3e-158 562.8 430 65.1
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 4.0e-158 562.0 423 65.5
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.2e-158 561.6 420 64.8
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-157 560.5 420 64.8
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 8.2e-156 554.3 423 64.3
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.4e-155 553.5 530 57.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 7.0e-155 551.2 416 64.9
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.0e-154 549.7 420 64.0
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 7.2e-152 541.2 419 64.7
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 8.8e-150 534.3 427 61.4
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 6.3e-148 528.1 422 60.9
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 3.1e-147 525.8 416 62.5
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 7.2e-144 514.6 421 60.3
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 9.5e-144 514.2 413 62.5
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.2e-138 497.3 354 68.1
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 6.1e-135 485.0 425 56.7
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.8e-134 483.4 431 56.4
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 6.8e-134 481.5 334 72.2
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 6.0e-130 468.4 427 56.7
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.3e-129 467.2 432 53.0
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 4.3e-128 462.2 418 58.1
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 4.7e-127 458.8 426 53.1
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 2.0e-117 426.8 353 62.3
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.6e-117 426.4 289 68.9
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.7e-116 422.5 441 47.6
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 7.8e-114 414.8 425 53.2
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 2.1e-111 406.8 280 69.3
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 9.6e-104 381.3 263 69.2
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 5.3e-102 375.6 420 48.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 8.4e-84 315.1 419 42.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 9.3e-83 311.6 193 76.2
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 7.4e-72 275.4 235 55.3
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 3.1e-62 243.4 182 67.6
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.9e-59 234.2 289 47.1
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.7e-47 194.5 136 71.3
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.0e-30 136.0 91 69.2
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.5e-27 127.5 92 60.9
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 7.2e-27 125.9 98 62.2
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.4e-22 110.9 88 59.1
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 5.0e-12 76.6 363 23.7
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 6.2e-10 69.7 91 41.8
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.2e-07 61.2 41 61.0


User provided reference genes

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