Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.0e-189 665.6 341 100.0
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.6e-160 568.9 341 85.9
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 4.9e-159 564.7 341 83.0
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 4.5e-157 558.1 341 83.0
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 7.7e-157 557.4 342 82.2
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 7.7e-157 557.4 342 82.2
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 1.2e-154 550.1 342 82.5
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 4.7e-154 548.1 342 81.6
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.0e-153 547.0 343 81.9
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.3e-153 545.8 341 80.6
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 4.0e-153 545.0 342 80.7
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 4.0e-153 545.0 341 81.2
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 2.0e-152 542.7 342 81.0
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 3.4e-152 542.0 341 79.5
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 5.7e-152 541.2 342 81.3
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 7.5e-152 540.8 342 80.4
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 3.7e-151 538.5 343 80.2
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.9e-151 538.1 344 80.2
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 8.3e-151 537.3 342 79.8
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 1.8e-150 536.2 347 78.7
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 1.8e-150 536.2 326 81.9
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 2.4e-150 535.8 343 79.0
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 3.2e-150 535.4 349 78.2
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 3.2e-150 535.4 342 79.8
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 3.2e-150 535.4 344 79.4
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 7.0e-150 534.3 323 81.7
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 2.0e-149 532.7 348 78.4
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 2.7e-149 532.3 323 81.7
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 2.7e-149 532.3 343 79.9
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 4.6e-149 531.6 341 80.4
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 4.6e-149 531.6 351 77.8
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 5.9e-149 531.2 345 78.6
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.3e-148 530.0 348 78.2
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 3.0e-148 528.9 339 79.1
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 5.0e-148 528.1 353 77.1
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 6.6e-148 527.7 355 76.3
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.9e-147 526.2 339 79.1
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.9e-147 526.2 346 77.5
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 2.5e-147 525.8 345 77.7
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 3.3e-147 525.4 341 78.3
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 3.3e-147 525.4 346 77.5
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 3.3e-147 525.4 346 77.5
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 3.3e-147 525.4 327 79.8
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 5.6e-147 524.6 342 78.1
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 7.3e-147 524.2 338 77.2
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 7.3e-147 524.2 340 77.6
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 7.3e-147 524.2 345 77.1
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.5e-147 523.9 345 77.4
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 1.6e-146 523.1 345 77.4
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.6e-146 523.1 344 77.9
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 1.6e-146 523.1 353 76.5
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.8e-146 522.3 323 80.5
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 6.2e-146 521.2 338 76.9
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 6.2e-146 521.2 338 76.9
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 6.2e-146 521.2 342 76.6
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 8.0e-146 520.8 319 80.9
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.8e-145 519.6 323 80.8
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 3.1e-145 518.8 339 77.9
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 3.1e-145 518.8 343 77.3
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.2e-145 518.1 323 80.5
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 8.9e-145 517.3 344 77.9
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 8.9e-145 517.3 330 80.3
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.0e-144 516.2 345 76.8
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 3.4e-144 515.4 343 76.1
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 5.8e-144 514.6 342 78.1
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 7.5e-144 514.2 338 76.6
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 2.9e-143 512.3 351 74.6
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 4.9e-143 511.5 323 78.0
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 6.4e-143 511.1 328 79.0
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.1e-142 510.4 319 80.6
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.4e-142 510.0 319 80.3
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 1.9e-142 509.6 326 78.2
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 1.9e-142 509.6 326 78.5
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 3.2e-142 508.8 323 78.3
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.1e-142 508.4 326 78.8
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 4.1e-142 508.4 319 79.9
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 5.4e-142 508.1 348 75.0
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.7e-141 505.8 341 74.5
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 3.5e-141 505.4 347 74.1
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 7.8e-141 504.2 343 74.9
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.3e-140 503.4 343 74.1
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 2.3e-140 502.7 323 77.1
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 3.0e-140 502.3 344 77.0
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 8.6e-140 500.7 343 77.0
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 3.3e-139 498.8 323 75.9
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 5.6e-139 498.0 369 69.9
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 7.3e-139 497.7 323 75.5
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 1.2e-138 496.9 342 72.8
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 1.2e-138 496.9 342 72.8
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 1.2e-138 496.9 342 72.8
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 1.6e-138 496.5 341 73.9
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 2.8e-138 495.7 323 74.9
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 2.8e-138 495.7 324 75.9
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 3.6e-138 495.4 337 74.8
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 1.8e-137 493.0 342 71.9
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 1.8e-137 493.0 342 71.9
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 1.8e-137 493.0 344 73.5
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 2.3e-137 492.7 324 75.0
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 2.3e-137 492.7 324 75.6
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 3.1e-137 492.3 323 75.2
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 3.1e-137 492.3 323 74.6
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 4.0e-137 491.9 343 71.4
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 5.2e-137 491.5 323 74.0
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 6.8e-137 491.1 323 73.7
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 6.8e-137 491.1 323 73.7
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 6.8e-137 491.1 323 73.7
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.2e-136 490.3 331 73.4
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 2.0e-136 489.6 323 75.2
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 2.2e-135 486.1 324 73.8
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 2.9e-135 485.7 362 69.9
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 7.1e-134 481.1 342 71.3
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.7e-130 468.4 344 73.8
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.7e-130 468.4 297 78.1
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 6.8e-129 464.5 384 65.4
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.3e-127 460.3 341 70.4
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 1.9e-126 456.4 340 70.0
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 4.1e-126 455.3 341 69.8
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.2e-126 454.1 345 67.8
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 1.2e-125 453.8 323 70.6
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 4.6e-125 451.8 320 67.5
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.0e-124 450.7 297 78.8
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.0e-124 450.7 297 78.8
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.0e-124 449.1 332 66.3
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.1e-123 447.2 344 69.2
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.9e-123 446.4 324 68.5
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 2.5e-123 446.0 345 65.8
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 4.3e-123 445.3 323 69.3
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 4.3e-123 445.3 323 69.3
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 7.3e-123 444.5 332 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.4e-121 440.3 315 67.9
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 3.1e-121 439.1 324 67.0
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 3.2e-118 429.1 323 69.0
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 3.9e-116 422.2 318 63.8
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 3.4e-112 409.1 285 74.0
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.7e-111 406.8 318 63.8
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.6e-109 400.2 322 60.9
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.1e-106 389.8 327 59.0
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 2.9e-103 379.4 231 81.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.6e-96 356.3 229 77.3
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 7.4e-91 338.2 231 70.6
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 1.2e-88 330.9 201 80.6
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.0e-84 316.2 298 54.7
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 5.3e-81 305.4 205 76.6
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 8.8e-76 288.1 246 63.8
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 8.8e-68 261.5 185 73.5
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.2e-66 255.0 186 64.5
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 8.2e-66 255.0 186 64.5
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.3e-58 231.1 165 66.1
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.3e-55 221.1 131 80.9
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 6.1e-53 212.2 119 85.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 8.0e-53 211.8 123 82.9
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 7.5e-51 205.3 122 77.0
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 3.0e-44 183.3 164 59.1
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 1.5e-43 181.0 164 59.1
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 6.3e-42 175.6 164 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.2e-37 161.4 123 63.4
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 8.9e-28 128.6 70 88.6
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 2.0e-27 127.5 118 62.7
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.9e-25 120.9 92 70.7
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.4e-25 120.6 208 38.0
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 3.9e-23 113.2 92 66.3
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 4.4e-19 99.8 78 62.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 1.4e-17 94.7 71 67.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.2e-17 93.6 119 44.5
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.6e-13 81.3 78 53.8
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.1e-12 78.6 145 41.4
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 7.1e-09 65.9 42 81.0
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 5.1e-07 59.7 51 60.8
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 2.5e-06 57.4 36 66.7


User provided reference genes

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