Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014150 Daucus carota HOM05D000317 ORTHO05D000032 2.2e-165 585.5 288 100.0
Lsat_1_v5_gn_3_67301 Lactuca sativa HOM05D000317 ORTHO05D000032 2.7e-25 120.2 212 43.9
Lj4C255T10 Lonicera japonica HOM05D000317 ORTHO05D000032 2.7e-25 120.2 225 41.3
CSS0039972 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 1.0e-24 118.2 238 43.7
HanXRQChr17g0554961 Helianthus annuus HOM05D000317 ORTHO05D000032 1.0e-24 118.2 193 45.1
Oeu009428.1 Olea europaea HOM05D000317 ORTHO05D000032 5.0e-24 115.9 233 42.9
Oeu048962.1 Olea europaea HOM05D000317 ORTHO05D000032 1.1e-23 114.8 233 43.3
Duzib138G0727 Durio zibethinus HOM05D000317 ORTHO05D000032 4.3e-23 112.8 191 46.6
Actinidia17181 Actinidia chinensis HOM05D000317 ORTHO05D000032 1.6e-22 110.9 216 43.1
Hma1.2p1_0034F.1_g021260 Hydrangea macrophylla HOM05D000317 ORTHO05D000032 2.8e-22 110.2 185 46.5
COL.COLO4_19782 Corchorus olitorius HOM05D000317 ORTHO05D000032 6.2e-22 109.0 196 41.3
HanXRQChr16g0532741 Helianthus annuus HOM05D000317 ORTHO05D000032 1.0e-21 108.2 195 45.1
CiPaw.03G075400 Carya illinoinensis HOM05D000317 ORTHO05D000032 3.1e-21 106.7 214 42.1
Hma1.2p1_0158F.1_g069860 Hydrangea macrophylla HOM05D000317 ORTHO05D000032 6.8e-21 105.5 239 38.1
Cpa.g.sc1066.1 Carica papaya HOM05D000317 ORTHO05D000032 8.9e-21 105.1 249 38.2
Haze_14299 Corylus avellana HOM05D000317 ORTHO05D000032 8.9e-21 105.1 176 46.0
Dinv19062 Davidia involucrata HOM05D000317 ORTHO05D000032 1.2e-20 104.8 231 40.7
Dinv28223 Davidia involucrata HOM05D000317 ORTHO05D000032 1.2e-20 104.8 196 46.9
Manes.01G121700 Manihot esculenta HOM05D000317 ORTHO05D000032 1.5e-20 104.4 236 39.0
MD09G1265400 Malus domestica HOM05D000317 ORTHO05D000032 3.4e-20 103.2 182 44.5
Peaxi162Scf00078g00177 Petunia axillaris HOM05D000317 ORTHO05D000032 5.8e-20 102.4 198 42.4
Thecc.04G001800 Theobroma cacao HOM05D000317 ORTHO05D000032 5.8e-20 102.4 225 41.8
Potri.017G137600 Populus trichocarpa HOM05D000317 ORTHO05D000032 7.5e-20 102.1 252 38.5
CiPaw.04G048400 Carya illinoinensis HOM05D000317 ORTHO05D000032 9.8e-20 101.7 224 41.1
Sabra17G0114800 Salix brachista HOM05D000317 ORTHO05D000032 2.2e-19 100.5 251 38.6
Manes.02G079700 Manihot esculenta HOM05D000317 ORTHO05D000032 2.9e-19 100.1 232 38.4
MSTRG.15647 Avicennia marina HOM05D000317 ORTHO05D000032 3.7e-19 99.8 207 42.0
Sabra17G0112100 Salix brachista HOM05D000317 ORTHO05D000032 6.4e-19 99.0 251 38.2
TAR629G1535 Trochodendron aralioides HOM05D000317 ORTHO05D000032 6.4e-19 99.0 241 40.2
Actinidia01602 Actinidia chinensis HOM05D000317 ORTHO05D000032 8.3e-19 98.6 215 39.5
MD17G1261500 Malus domestica HOM05D000317 ORTHO05D000032 1.1e-18 98.2 196 40.8
MSTRG.2631 Avicennia marina HOM05D000317 ORTHO05D000032 3.2e-18 96.7 229 40.6
Potri.004G082400 Populus trichocarpa HOM05D000317 ORTHO05D000032 5.4e-18 95.9 255 37.6
QL02p059955 Quercus lobata HOM05D000317 ORTHO05D000032 5.4e-18 95.9 195 43.6
Sabra04G0054900 Salix brachista HOM05D000317 ORTHO05D000032 7.0e-18 95.5 256 37.1
Eucgr.F02896 Eucalyptus grandis HOM05D000317 ORTHO05D000032 1.6e-17 94.4 219 40.2
MSTRG.3691 Avicennia marina HOM05D000317 ORTHO05D000032 2.0e-17 94.0 203 41.9
Peaxi162Scf00424g00110 Petunia axillaris HOM05D000317 ORTHO05D000032 2.7e-17 93.6 185 40.0
Nitab4.5_0001088g0210 Nicotiana tabacum HOM05D000317 ORTHO05D000032 4.6e-17 92.8 212 39.6
Nitab4.5_0002465g0020 Nicotiana tabacum HOM05D000317 ORTHO05D000032 6.0e-17 92.4 215 39.5
Prupe.3G163500 Prunus persica HOM05D000317 ORTHO05D000032 1.0e-16 91.7 196 39.8
VMungo0647G1448 Vigna mungo HOM05D000317 ORTHO05D000032 1.3e-16 91.3 231 38.5
CSS0004133 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 3.0e-16 90.1 186 38.2
Atru.chr1.2039 Acer truncatum HOM05D000317 ORTHO05D000032 3.9e-16 89.7 203 43.3
GSVIVG01026319001 Vitis vinifera HOM05D000317 ORTHO05D000032 1.5e-15 87.8 207 41.5
Phvul.008G238900 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 1.9e-15 87.4 218 38.5
TWI74G0929 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 1.9e-15 87.4 176 43.2
LjContig00141g0024795 Lotus japonicus HOM05D000317 ORTHO05D000032 2.5e-15 87.0 198 38.4
TAR371G1064 Trochodendron aralioides HOM05D000317 ORTHO05D000032 3.3e-15 86.7 236 39.0
Lj6g0024021 Lotus japonicus HOM05D000317 ORTHO05D000032 5.6e-15 85.9 231 36.4
TAR622G1373 Trochodendron aralioides HOM05D000317 ORTHO05D000032 5.6e-15 85.9 242 36.4
Medtr3g064840 Medicago truncatula HOM05D000317 ORTHO05D000032 2.1e-14 84.0 226 39.4
Glyma.14G211900 Glycine max HOM05D000317 ORTHO05D000032 2.3e-13 80.5 223 36.3
Rhsim10G0182700 Rhododendron simsii HOM05D000317 ORTHO05D000032 3.1e-13 80.1 218 37.2
TPR.G26659 Trifolium pratense HOM05D000317 ORTHO05D000032 3.1e-13 80.1 233 38.2
Lj2A514T45 Lonicera japonica HOM05D000317 ORTHO05D000032 8.9e-13 78.6 200 37.5
Ca_27805_v3 Cicer arietinum L. HOM05D000317 ORTHO05D000032 1.2e-12 78.2 100 50.0
Lalb_Chr17g0345921 Lupinus albus HOM05D000317 ORTHO05D000032 1.2e-12 78.2 189 39.7
VMungo1383G3644 Vigna mungo HOM05D000317 ORTHO05D000032 1.5e-12 77.8 205 37.1
arahy.Tifrunner.gnm1.ann1.QX8C58 Arachis hypogaea HOM05D000317 ORTHO05D000032 3.4e-12 76.6 180 35.6
Phvul.001G227900 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 3.4e-12 76.6 194 37.1
Cc07_g13030 Coffea canephora HOM05D000317 ORTHO05D000032 4.4e-12 76.3 179 39.7
Psat0s1519g0040 Pisum sativum HOM05D000317 ORTHO05D000032 7.5e-12 75.5 98 55.1
PGSC0003DMG400013324 Solanum tuberosum HOM05D000317 ORTHO05D000032 7.5e-12 75.5 205 35.6
Lalb_Chr18g0053641 Lupinus albus HOM05D000317 ORTHO05D000032 1.7e-11 74.3 240 35.0
unitig_748.g8454 Utricularia gibba HOM05D000317 ORTHO05D000032 2.2e-11 73.9 213 36.6
Sopen11g006610 Solanum pennellii HOM05D000317 ORTHO05D000032 2.9e-11 73.6 213 35.7
SGA_v2.0_scaffold115G32091 Striga asiatica HOM05D000317 ORTHO05D000032 4.9e-11 72.8 180 36.1
SHI30115 Sapria himalayana HOM05D000317 ORTHO05D000032 6.4e-11 72.4 216 34.7
Glyma.11G213700 Glycine max HOM05D000317 ORTHO05D000032 8.3e-11 72.0 246 32.5
TWI53G0839 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 8.3e-11 72.0 181 39.8
arahy.Tifrunner.gnm1.ann1.1Z7GQF Arachis hypogaea HOM05D000317 ORTHO05D000032 1.4e-10 71.2 175 35.4
ATR0598G215 Amborella trichopoda HOM05D000317 ORTHO05D000032 1.9e-10 70.9 185 37.8
Solyc11g011770.3 Solanum lycopersicum HOM05D000317 ORTHO05D000032 3.2e-10 70.1 217 34.6
C02p08420 Brassica napus HOM05D000317 ORTHO05D000032 5.4e-10 69.3 177 37.9
BolC2t06760H Brassica oleracea HOM05D000317 ORTHO05D000032 5.4e-10 69.3 177 37.9
BcaC03g18500 Brassica carinata HOM05D000317 ORTHO05D000032 7.1e-10 68.9 177 37.9
PGSC0003DMG400006988 Solanum tuberosum HOM05D000317 ORTHO05D000032 7.1e-10 68.9 191 36.1
THA.LOC104802943 Tarenaya hassleriana HOM05D000317 ORTHO05D000032 9.2e-10 68.6 216 35.2
Lalb_Chr10g0104151 Lupinus albus HOM05D000317 ORTHO05D000032 1.6e-09 67.8 194 35.1
SalBow5G3740 Salvia bowleyana HOM05D000317 ORTHO05D000032 2.1e-09 67.4 170 41.8
Glyma.02G242100 Glycine max HOM05D000317 ORTHO05D000032 4.6e-09 66.2 226 35.0
Carub.0006s1476 Capsella rubella HOM05D000317 ORTHO05D000032 6.0e-09 65.9 187 34.2
Glyma.18G043000 Glycine max HOM05D000317 ORTHO05D000032 6.0e-09 65.9 206 33.0
Nitab4.5_0003836g0060 Nicotiana tabacum HOM05D000317 ORTHO05D000032 7.8e-09 65.5 147 38.8
SalBow3G1698 Salvia bowleyana HOM05D000317 ORTHO05D000032 1.0e-08 65.1 170 40.0
Migut.K01107 Erythranthe guttata HOM05D000317 ORTHO05D000032 1.7e-08 64.3 182 34.1
A02p03630 Brassica napus HOM05D000317 ORTHO05D000032 2.3e-08 63.9 177 35.6
BraA02t05332Z Brassica rapa HOM05D000317 ORTHO05D000032 2.3e-08 63.9 177 35.6
ClCG05G010540 Citrullus lanatus HOM05D000317 ORTHO05D000032 3.0e-08 63.5 176 38.1
Sed0005905 Sechium edule HOM05D000317 ORTHO05D000032 3.9e-08 63.2 166 38.0
Nitab4.5_0007572g0030 Nicotiana tabacum HOM05D000317 ORTHO05D000032 5.1e-08 62.8 146 39.0
unitig_0.g1687 Utricularia gibba HOM05D000317 ORTHO05D000032 5.1e-08 62.8 161 38.5
AL6G27520 Arabidopsis lyrata HOM05D000317 ORTHO05D000032 6.6e-08 62.4 192 31.8
CAN.G112.6 Capsicum annuum HOM05D000317 ORTHO05D000032 6.6e-08 62.4 193 29.5
CAN.G222.154 Capsicum annuum HOM05D000317 ORTHO05D000032 1.1e-07 61.6 223 33.6
QL10p031917 Quercus lobata HOM05D000317 ORTHO05D000032 1.1e-07 61.6 184 33.7
MELO3C019573.2 Cucumis melo HOM05D000317 ORTHO05D000032 1.5e-07 61.2 171 36.3
Lalb_Chr15g0085121 Lupinus albus HOM05D000317 ORTHO05D000032 4.3e-07 59.7 243 31.3
Cfa020649 Carpinus fangiana HOM05D000317 ORTHO05D000032 5.6e-07 59.3 121 39.7
TWI77G0625 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 5.6e-07 59.3 158 36.1
Sp6g27600 Schrenkiella parvula HOM05D000317 ORTHO05D000032 7.3e-07 58.9 201 33.3
BcaB08g36839 Brassica carinata HOM05D000317 ORTHO05D000032 9.5e-07 58.5 144 35.4
A03p07880 Brassica napus HOM05D000317 ORTHO05D000032 9.5e-07 58.5 127 37.0
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 9.5e-07 58.5 127 37.0
C03p09080 Brassica napus HOM05D000317 ORTHO05D000032 2.1e-06 57.4 127 37.0
C09p60600 Brassica napus HOM05D000317 ORTHO05D000032 2.1e-06 57.4 170 35.9
BolC3t13403H Brassica oleracea HOM05D000317 ORTHO05D000032 2.1e-06 57.4 127 37.0
BolC9t58893H Brassica oleracea HOM05D000317 ORTHO05D000032 2.1e-06 57.4 170 35.9
A10p22650 Brassica napus HOM05D000317 ORTHO05D000032 2.8e-06 57.0 170 34.1
BraA10t44326Z Brassica rapa HOM05D000317 ORTHO05D000032 2.8e-06 57.0 170 34.1
Cpa.g.sc3.342 Carica papaya HOM05D000317 ORTHO05D000032 3.6e-06 56.6 189 33.3
Sed0006493 Sechium edule HOM05D000317 ORTHO05D000032 3.6e-06 56.6 221 30.3
BcaB01g04975 Brassica carinata HOM05D000317 ORTHO05D000032 4.7e-06 56.2 133 39.1
CDE05G1012 Ceratophyllum demersum HOM05D000317 ORTHO05D000032 6.2e-06 55.8 169 34.9
CsaV3_3G017970 Cucumis sativus L. HOM05D000317 ORTHO05D000032 6.2e-06 55.8 173 35.8
CDE05G2154 Ceratophyllum demersum HOM05D000317 ORTHO05D000032 8.1e-06 55.5 215 31.6


User provided reference genes

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