Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 0.0e+00 1138.6 569 100.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 8.9e-182 641.0 584 59.4
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.5e-176 623.6 554 60.5
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 5.6e-176 621.7 541 60.4
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 2.0e-173 613.2 547 59.8
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.9e-172 609.4 560 60.9
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.5e-168 597.0 546 57.7
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.6e-167 593.6 579 55.3
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.1e-167 593.2 546 59.0
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 2.1e-167 593.2 631 54.0
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 2.6e-165 586.3 568 56.3
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 7.6e-165 584.7 557 58.2
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 7.6e-165 584.7 575 56.2
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.3e-164 583.9 580 56.2
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 2.2e-164 583.2 554 57.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.8e-164 582.4 547 58.3
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.6e-162 577.0 553 57.0
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 7.8e-162 574.7 587 56.9
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.3e-161 573.2 633 52.0
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 6.6e-161 571.6 534 56.2
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 7.3e-160 568.2 549 56.8
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 7.3e-160 568.2 545 55.8
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.2e-159 567.4 548 54.7
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 1.6e-159 567.0 582 53.4
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 2.8e-159 566.2 579 53.7
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 4.7e-159 565.5 562 55.2
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 1.1e-158 564.3 563 54.9
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 1.1e-158 564.3 571 54.5
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.4e-158 563.1 590 54.2
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.0e-157 560.1 560 55.5
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 2.0e-157 560.1 583 53.3
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.3e-156 557.4 486 62.3
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.7e-156 557.0 547 54.8
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.2e-156 556.6 560 55.0
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 6.4e-156 555.1 543 58.2
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 6.4e-156 555.1 556 54.7
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 6.4e-156 555.1 550 57.1
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.4e-155 553.9 563 53.8
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.9e-155 553.5 542 55.9
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.2e-154 550.8 566 52.7
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 2.3e-153 546.6 536 55.6
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 6.6e-153 545.0 534 54.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.6e-151 540.4 536 54.5
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 8.1e-151 538.1 530 55.3
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 3.1e-150 536.2 578 52.1
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 4.0e-150 535.8 537 54.6
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 6.9e-150 535.0 532 55.5
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 6.9e-150 535.0 535 55.1
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.0e-149 533.5 562 52.1
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 5.8e-149 531.9 530 54.3
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 9.9e-149 531.2 554 52.2
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 2.9e-148 529.6 521 56.2
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 1.4e-147 527.3 579 51.1
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 7.1e-147 525.0 558 53.4
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 9.3e-147 524.6 538 54.5
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 1.2e-146 524.2 556 52.3
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.7e-146 523.1 557 52.1
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 2.7e-146 523.1 553 52.3
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.8e-145 520.4 530 53.8
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 2.3e-145 520.0 530 53.6
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.0e-145 519.6 586 51.4
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 3.9e-145 519.2 530 53.6
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 6.7e-145 518.5 554 52.3
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.1e-144 517.7 555 52.4
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.9e-144 516.9 489 55.4
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 3.3e-144 516.2 552 51.3
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 7.4e-144 515.0 527 53.7
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 7.4e-144 515.0 557 51.7
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.6e-143 513.8 556 53.4
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.6e-143 513.8 542 52.8
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 4.8e-143 512.3 528 54.2
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 5.3e-142 508.8 597 48.1
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-140 504.2 531 54.6
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 4.9e-140 502.3 528 54.5
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 4.9e-140 502.3 528 54.5
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 7.1e-139 498.4 553 52.3
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 6.0e-138 495.4 435 59.3
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 3.9e-137 492.7 536 50.9
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 6.7e-137 491.9 551 50.6
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 7.4e-136 488.4 528 52.5
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.8e-135 486.5 553 50.3
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 2.8e-135 486.5 544 50.9
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 4.0e-134 482.6 536 50.7
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 9.0e-134 481.5 571 50.4
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.8e-129 467.2 558 48.7
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 8.7e-129 464.9 495 49.9
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.9e-128 463.8 549 48.1
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 1.9e-128 463.8 454 56.4
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.9e-128 463.8 589 49.1
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 3.1e-126 456.4 484 52.7
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.3e-126 455.7 528 50.0
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 6.9e-126 455.3 558 46.6
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 9.7e-120 434.9 411 57.9
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.2e-117 427.9 359 62.7
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 2.9e-116 423.3 395 57.2
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.7e-111 407.5 273 73.3
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.4e-105 387.9 279 68.8
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 4.4e-104 382.9 595 40.3
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 2.6e-96 357.1 444 47.1
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 2.6e-96 357.1 584 38.4
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 7.5e-96 355.5 547 41.7
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 5.9e-93 345.9 408 48.3
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 8.3e-87 325.5 244 66.8
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.9e-84 317.0 290 57.9
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 6.8e-81 305.8 293 53.6
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.6e-74 284.6 231 60.6
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.4e-70 271.6 477 36.9
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.7e-68 264.6 255 56.1
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 2.6e-48 197.6 265 40.4
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.6e-45 188.3 511 28.8
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 4.6e-45 186.8 219 49.3
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 3.9e-44 183.7 166 56.0
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.9e-36 157.1 203 41.9
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 5.1e-36 156.8 202 45.0
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.4e-33 147.9 202 45.5
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 2.6e-32 144.4 211 45.0
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.0e-28 132.5 116 62.1
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.5e-27 127.9 251 37.5
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 7.1e-22 109.8 118 44.9
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 1.0e-20 105.9 323 27.6
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 2.5e-19 101.3 162 37.0
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.6e-18 98.6 203 32.5
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.1e-18 98.2 147 42.2
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 4.8e-18 97.1 148 35.1
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 4.0e-17 94.0 45 93.3
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 9.0e-17 92.8 80 60.0
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 2.2e-15 88.2 144 41.7
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.9e-14 85.1 163 35.6
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 7.9e-13 79.7 65 61.5
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.8e-12 78.6 44 79.5
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.9e-09 66.6 111 38.7
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 9.4e-06 56.2 46 63.0


User provided reference genes

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