Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 2.1e-71 272.3 141 100.0
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 3.3e-61 238.4 139 89.2
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 3.0e-54 215.3 142 83.1
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 1.9e-53 212.6 139 78.4
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 3.3e-53 211.8 140 81.4
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 4.3e-53 211.5 141 79.4
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 7.4e-53 210.7 141 80.9
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 2.8e-52 208.8 141 80.1
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 3.6e-52 208.4 141 79.4
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 1.8e-51 206.1 139 77.0
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 1.8e-51 206.1 142 78.2
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 2.4e-51 205.7 142 81.0
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 2.4e-51 205.7 139 79.9
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 4.0e-51 204.9 142 80.3
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 6.9e-51 204.1 142 80.3
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 9.0e-51 203.8 142 80.3
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 9.0e-51 203.8 142 79.6
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 1.2e-50 203.4 141 74.5
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 1.5e-50 203.0 142 78.2
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 2.0e-50 202.6 142 80.3
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 2.0e-50 202.6 142 80.3
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 2.0e-50 202.6 142 79.6
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 2.0e-50 202.6 142 79.6
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 3.4e-50 201.8 142 77.5
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 7.6e-50 200.7 142 77.5
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 9.9e-50 200.3 142 76.1
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 1.3e-49 199.9 137 80.3
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 2.2e-49 199.1 141 77.3
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 4.9e-49 198.0 141 76.6
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 4.9e-49 198.0 142 73.9
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 6.4e-49 197.6 142 76.8
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 1.1e-48 196.8 142 76.8
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 1.1e-48 196.8 142 76.8
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 1.4e-48 196.4 142 73.9
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.4e-48 196.4 140 75.0
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 2.4e-48 195.7 142 76.8
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 2.4e-48 195.7 136 77.2
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 2.4e-48 195.7 139 74.1
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 3.2e-48 195.3 139 72.7
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 3.2e-48 195.3 142 75.4
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 4.2e-48 194.9 142 73.9
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 4.2e-48 194.9 142 73.9
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 4.2e-48 194.9 143 76.2
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 4.2e-48 194.9 142 75.4
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 4.2e-48 194.9 139 72.7
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 4.2e-48 194.9 139 74.1
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 5.5e-48 194.5 143 74.1
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 5.5e-48 194.5 143 74.1
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 7.1e-48 194.1 141 73.0
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 7.1e-48 194.1 142 77.5
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 9.3e-48 193.7 144 76.4
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 9.3e-48 193.7 143 75.5
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 1.2e-47 193.4 142 73.2
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 1.2e-47 193.4 142 73.2
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 1.2e-47 193.4 142 73.2
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 1.2e-47 193.4 142 73.2
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 1.2e-47 193.4 141 73.8
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 1.6e-47 193.0 143 72.7
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 1.6e-47 193.0 143 72.7
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 1.6e-47 193.0 141 74.5
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 2.1e-47 192.6 141 73.8
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 2.1e-47 192.6 143 72.7
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 2.1e-47 192.6 142 73.9
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 2.1e-47 192.6 143 72.7
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 2.1e-47 192.6 143 72.7
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 2.1e-47 192.6 145 74.5
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 2.1e-47 192.6 141 73.8
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 2.7e-47 192.2 143 72.7
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 2.7e-47 192.2 143 72.7
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 2.7e-47 192.2 142 71.8
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 3.5e-47 191.8 138 72.5
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 4.6e-47 191.4 143 72.7
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 4.6e-47 191.4 139 72.7
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 4.6e-47 191.4 139 73.4
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 4.6e-47 191.4 143 74.1
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 7.9e-47 190.7 142 72.5
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 7.9e-47 190.7 143 71.3
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 7.9e-47 190.7 141 73.0
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 7.9e-47 190.7 142 74.6
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 1.0e-46 190.3 142 73.2
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 1.0e-46 190.3 141 73.0
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 1.0e-46 190.3 141 73.0
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 1.0e-46 190.3 141 73.0
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 1.0e-46 190.3 141 73.0
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 1.0e-46 190.3 141 73.0
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 1.0e-46 190.3 142 73.2
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 1.0e-46 190.3 140 75.0
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 1.3e-46 189.9 142 73.2
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 1.8e-46 189.5 140 75.0
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.8e-46 189.5 140 74.3
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 1.8e-46 189.5 140 74.3
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 2.3e-46 189.1 143 70.6
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 2.3e-46 189.1 136 77.2
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 3.0e-46 188.7 142 73.9
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 3.0e-46 188.7 137 75.2
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 3.9e-46 188.3 141 71.6
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 3.9e-46 188.3 142 73.9
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 6.7e-46 187.6 143 72.7
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 8.7e-46 187.2 139 75.5
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 8.7e-46 187.2 142 73.2
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 1.1e-45 186.8 142 73.2
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 1.5e-45 186.4 143 76.9
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 1.9e-45 186.0 142 74.6
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.9e-45 186.0 145 71.7
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 1.9e-45 186.0 141 72.3
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 2.5e-45 185.7 135 75.6
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 3.3e-45 185.3 140 72.9
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 4.3e-45 184.9 141 72.3
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 4.3e-45 184.9 142 73.9
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 4.3e-45 184.9 140 70.7
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 4.3e-45 184.9 137 72.3
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 4.3e-45 184.9 137 72.3
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 4.3e-45 184.9 142 74.6
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 7.4e-45 184.1 142 72.5
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 7.4e-45 184.1 141 70.9
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 1.3e-44 183.3 142 72.5
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 3.7e-44 181.8 139 70.5
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 3.7e-44 181.8 143 70.6
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 4.8e-44 181.4 140 69.3
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 8.1e-44 180.6 143 66.4
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 8.1e-44 180.6 142 71.8
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 3.1e-43 178.7 156 66.0
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 3.1e-43 178.7 144 71.5
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 5.3e-43 177.9 141 70.9
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 1.5e-42 176.4 141 68.8
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 2.6e-42 175.6 141 69.5
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 5.8e-42 174.5 144 69.4
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 3.8e-41 171.8 142 69.0
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 6.5e-41 171.0 143 67.1
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 8.4e-41 170.6 143 67.8
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 1.8e-38 162.9 117 73.5
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 5.1e-38 161.4 111 78.4
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 8.7e-38 160.6 139 63.3
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 8.7e-38 160.6 142 63.4
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 1.9e-37 159.5 141 63.8
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 3.3e-37 158.7 142 66.9
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 7.4e-37 157.5 141 61.7
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 9.6e-37 157.1 160 58.1
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 6.3e-36 154.5 154 59.1
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 4.1e-35 151.8 118 67.8
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 4.5e-34 148.3 115 71.3
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 1.7e-33 146.4 137 58.4
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 2.2e-33 146.0 139 57.6
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 1.1e-32 143.7 88 81.8
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 1.1e-32 143.7 142 62.7
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.9e-32 142.9 126 61.9
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 2.3e-30 136.0 118 61.0
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 1.1e-29 133.7 143 55.9
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 3.3e-29 132.1 89 75.3
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 3.3e-29 132.1 145 58.6
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.6e-28 129.8 120 59.2
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.6e-28 129.8 142 54.2
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 4.1e-27 125.2 90 73.3
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.5e-26 123.2 147 51.0
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 2.0e-26 122.9 148 52.0
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 3.4e-26 122.1 92 76.1
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 4.5e-26 121.7 141 51.8
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 1.8e-22 109.8 109 58.7
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 3.1e-19 99.0 66 69.7
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 5.9e-18 94.7 80 67.5
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 5.9e-18 94.7 52 82.7
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 7.7e-18 94.4 88 53.4
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 1.3e-17 93.6 83 59.0
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 6.5e-17 91.3 141 46.1
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 1.8e-14 83.2 87 60.9


User provided reference genes

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