Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 6.0e-69 266.2 127 100.0
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 4.3e-43 180.3 112 75.0
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 2.2e-39 167.9 113 69.0
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.9e-39 167.5 113 69.0
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.4e-38 165.2 113 68.1
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.2e-38 164.1 113 68.1
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.8e-36 158.3 113 62.8
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 4.4e-35 153.7 112 61.6
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 7.4e-35 152.9 120 60.8
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 7.4e-35 152.9 113 62.8
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.3e-34 152.1 113 62.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 2.2e-34 151.4 113 62.8
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 3.7e-34 150.6 113 62.8
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.6e-32 145.2 114 61.4
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 2.0e-32 144.8 113 57.5
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 2.0e-32 144.8 113 57.5
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 2.0e-32 144.8 113 57.5
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 2.6e-32 144.4 113 61.1
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 7.7e-32 142.9 113 61.9
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 7.7e-32 142.9 113 57.5
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.0e-31 142.5 113 57.5
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.3e-31 142.1 113 57.5
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 2.2e-31 141.4 113 59.3
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 2.9e-31 141.0 113 57.5
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 2.9e-31 141.0 113 57.5
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 2.9e-31 141.0 117 55.6
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 3.8e-31 140.6 113 57.5
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 3.8e-31 140.6 114 61.4
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 5.0e-31 140.2 116 60.3
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 5.0e-31 140.2 111 55.9
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.5e-30 138.7 113 60.2
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.9e-30 138.3 107 61.7
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.9e-30 138.3 111 57.7
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 2.5e-30 137.9 113 56.6
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 3.2e-30 137.5 113 55.8
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.2e-30 137.5 113 61.1
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.2e-30 137.5 113 61.1
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 4.2e-30 137.1 113 54.9
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 7.2e-30 136.3 113 61.1
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 7.2e-30 136.3 113 61.1
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 7.2e-30 136.3 112 58.0
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 9.4e-30 136.0 113 54.0
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 1.6e-29 135.2 113 54.9
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 2.7e-29 134.4 112 54.5
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 2.7e-29 134.4 113 57.5
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 3.6e-29 134.0 107 60.7
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 4.7e-29 133.7 113 59.3
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 6.1e-29 133.3 107 60.7
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 8.0e-29 132.9 107 59.8
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 8.0e-29 132.9 115 58.3
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 8.0e-29 132.9 115 55.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 8.0e-29 132.9 107 58.9
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 2.3e-28 131.3 113 54.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 2.3e-28 131.3 115 54.8
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 5.2e-28 130.2 115 54.8
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 8.8e-28 129.4 117 49.6
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 1.5e-27 128.6 114 57.0
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 2.0e-27 128.3 121 54.5
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 2.0e-27 128.3 115 53.0
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.6e-27 127.9 109 56.9
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 4.4e-27 127.1 110 59.1
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 4.4e-27 127.1 121 53.7
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 4.4e-27 127.1 121 53.7
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 5.7e-27 126.7 121 52.9
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.5e-27 126.3 120 53.3
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 7.5e-27 126.3 114 56.1
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 9.7e-27 125.9 109 54.1
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 2.2e-26 124.8 70 80.0
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 8.2e-26 122.9 116 51.7
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.4e-25 122.1 94 61.7
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 7.0e-25 119.8 119 51.3
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.2e-24 119.0 84 63.1
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 5.9e-24 116.7 118 52.5
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.0e-23 115.9 121 51.2
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 1.7e-23 115.2 127 48.8
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 2.9e-23 114.4 116 50.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 3.8e-23 114.0 115 51.3
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.1e-22 112.5 70 70.0
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 1.9e-22 111.7 97 54.6
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 3.2e-22 110.9 117 49.6
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 7.2e-22 109.8 119 48.7
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 1.2e-19 102.4 113 46.9
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 2.2e-18 98.2 105 51.4
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 8.3e-18 96.3 117 46.2
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 5.4e-17 93.6 124 43.5
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.6e-16 92.0 126 42.9
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 2.7e-16 91.3 125 40.8
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 4.5e-16 90.5 123 44.7
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.0e-15 89.4 119 44.5
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.3e-15 89.0 124 43.5
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.1e-14 85.9 121 43.0
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.1e-14 85.9 128 41.4
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.9e-14 85.1 114 43.9
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 1.9e-14 85.1 114 43.9
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 3.2e-14 84.3 73 50.7
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 7.2e-14 83.2 114 43.9
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 7.2e-14 83.2 90 48.9
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 9.4e-14 82.8 94 47.9
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 9.4e-14 82.8 90 48.9
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 2.1e-13 81.6 81 50.6
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.4e-11 73.9 113 33.6
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 9.8e-11 72.8 87 37.9
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 3.7e-10 70.9 42 71.4


User provided reference genes

Program Settings