Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 0.0e+00 1354.3 682 100.0
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 9.8e-303 1043.1 678 78.2
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 2.0e-300 1035.4 692 76.4
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 4.5e-300 1034.2 702 76.1
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 4.2e-298 1027.7 677 77.7
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 3.6e-297 1024.6 680 76.3
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 1.4e-296 1022.7 677 76.5
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 8.3e-294 1013.4 677 75.9
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 7.0e-293 1010.4 678 74.8
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 2.9e-291 1005.0 677 74.2
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 8.6e-291 1003.4 680 75.6
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 3.3e-290 1001.5 683 75.7
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 2.3e-288 995.3 671 74.2
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 9.8e-287 989.9 682 72.9
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 1.3e-286 989.6 669 74.3
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 2.2e-286 988.8 673 74.9
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 4.9e-286 987.6 676 74.4
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 1.2e-284 983.0 680 72.8
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 7.8e-284 980.3 676 73.7
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 4.7e-281 971.1 692 72.4
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 4.7e-281 971.1 692 72.4
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 3.1e-280 968.4 680 72.5
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 8.9e-280 966.8 693 71.1
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 1.2e-279 966.5 676 71.7
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 2.0e-279 965.7 678 72.9
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 2.0e-279 965.7 676 72.6
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 3.4e-279 964.9 678 72.7
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 9.8e-279 963.4 733 70.0
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 3.7e-278 961.4 668 71.9
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 6.4e-278 960.7 710 69.9
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 4.1e-277 958.0 681 70.3
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.6e-276 956.1 680 69.9
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 1.6e-276 956.1 680 69.9
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 2.3e-275 952.2 677 71.8
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 7.3e-274 947.2 680 69.7
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 2.8e-273 945.3 658 71.3
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.1e-272 943.3 678 70.5
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 3.1e-272 941.8 676 68.6
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 2.1e-268 929.1 679 71.3
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 2.1e-268 929.1 680 71.3
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 3.3e-266 921.8 684 68.1
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 9.6e-266 920.2 650 72.2
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 4.7e-265 917.9 658 68.7
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 5.2e-264 914.4 677 67.4
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 8.9e-264 913.7 655 70.1
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 2.6e-263 912.1 685 68.2
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 3.8e-262 908.3 690 67.4
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 1.4e-261 906.4 675 68.4
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 2.4e-261 905.6 680 67.2
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 5.4e-261 904.4 679 69.2
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 1.2e-260 903.3 680 66.8
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 2.7e-260 902.1 680 68.5
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 6.0e-260 901.0 681 68.6
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 1.0e-259 900.2 680 66.8
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 1.3e-259 899.8 679 67.5
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.3e-259 899.8 680 68.8
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 8.7e-259 897.1 680 65.7
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 5.6e-258 894.4 680 69.1
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 6.2e-257 891.0 719 65.0
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 8.1e-257 890.6 719 65.0
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 1.4e-256 889.8 681 67.0
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 5.3e-256 887.9 719 64.0
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 1.5e-255 886.3 680 66.0
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 1.5e-255 886.3 683 68.5
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 1.3e-254 883.2 669 66.7
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 1.3e-254 883.2 677 65.4
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 1.2e-252 876.7 678 65.3
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 9.6e-250 867.1 680 66.3
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 5.8e-247 857.8 678 64.6
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 1.3e-246 856.7 673 65.4
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.0e-243 847.0 1003 49.8
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 5.1e-243 844.7 669 64.9
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.8e-240 836.3 690 62.5
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 1.5e-239 833.2 691 62.8
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 2.0e-239 832.8 688 63.2
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 1.0e-238 830.5 692 63.6
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 1.3e-238 830.1 689 63.1
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 2.2e-238 829.3 589 70.5
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 2.5e-237 825.9 690 62.2
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 9.3e-237 823.9 687 62.4
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.6e-236 823.2 687 62.4
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 2.7e-236 822.4 687 62.4
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 4.3e-234 815.1 689 61.5
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 2.1e-233 812.8 689 61.4
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 2.7e-228 795.8 674 61.1
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 3.0e-227 792.3 508 75.8
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 5.1e-227 791.6 694 60.7
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 3.3e-226 788.9 694 60.5
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 1.3e-225 786.9 691 60.6
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 1.3e-225 786.9 691 60.6
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.4e-219 766.9 718 58.4
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.4e-213 746.9 681 59.6
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 1.5e-210 736.9 692 57.5
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 4.4e-210 735.3 448 79.2
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 2.0e-207 726.5 705 53.6
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 6.1e-204 714.9 509 69.5
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 4.4e-202 708.8 677 54.5
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 5.7e-202 708.4 702 52.0
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 2.2e-201 706.4 828 48.7
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 2.2e-198 696.4 667 54.3
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 3.2e-197 692.6 658 56.1
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.0e-195 687.6 433 78.1
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 2.2e-193 679.9 542 63.8
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 2.3e-187 659.8 680 55.3
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 1.4e-179 634.0 428 70.1
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 3.3e-165 586.3 705 45.0
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 4.4e-162 575.9 528 57.4
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.8e-156 556.6 579 54.2
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 1.9e-149 533.9 550 53.8
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 2.2e-145 520.4 680 42.8
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 3.2e-144 516.5 710 41.0
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.2e-127 461.5 419 63.2
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 3.3e-125 453.4 434 56.5
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 3.4e-122 443.4 429 55.0
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 5.1e-118 429.5 540 42.8
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-99 368.2 435 49.2
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 7.9e-95 352.4 658 38.6
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 7.9e-95 352.4 295 61.4
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.5e-88 331.6 219 74.9
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-87 327.8 370 48.6
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 5.2e-86 323.2 610 35.7
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-84 318.2 304 53.3
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 5.4e-75 286.6 362 48.3
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 1.1e-72 278.9 259 62.9
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 1.7e-68 265.0 263 58.9
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 9.2e-67 259.2 240 54.6
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 8.0e-63 246.1 256 56.6
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 1.0e-62 245.7 252 54.0
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.8e-62 245.0 262 51.9
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 2.6e-61 241.1 256 55.9
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 9.2e-59 232.6 130 84.6
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 3.9e-57 227.3 205 56.6
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 1.2e-55 222.2 137 80.3
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 1.7e-49 201.8 234 53.8
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 3.0e-49 201.1 107 86.9
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 9.2e-43 179.5 133 64.7
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 6.0e-42 176.8 115 76.5
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 7.3e-40 169.9 102 79.4
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 1.6e-39 168.7 102 78.4
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 4.4e-37 160.6 89 84.3
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 4.4e-37 160.6 89 84.3
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 4.4e-37 160.6 89 84.3
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 2.2e-36 158.3 103 75.7
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 2.9e-36 157.9 145 57.9
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 8.4e-36 156.4 202 47.0
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.1e-35 156.0 85 84.7
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 1.9e-35 155.2 116 69.8
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 9.2e-35 152.9 169 47.3
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 1.6e-34 152.1 168 53.0
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 2.7e-34 151.4 107 63.6
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 6.6e-33 146.7 227 40.1
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 2.5e-32 144.8 79 82.3
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 9.6e-32 142.9 79 82.3
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 1.6e-31 142.1 106 65.1
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 2.0e-29 135.2 207 38.2
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 7.1e-27 126.7 70 77.1
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 4.3e-24 117.5 65 75.4
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 7.6e-21 106.7 103 58.3
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 9.9e-21 106.3 190 40.0
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 6.4e-20 103.6 60 80.0
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 1.1e-19 102.8 89 52.8
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 3.2e-19 101.3 60 80.0
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 4.2e-19 100.9 88 56.8
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 5.4e-19 100.5 56 76.8
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 7.1e-19 100.1 95 55.8
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 1.2e-18 99.4 56 75.0
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 2.1e-18 98.6 56 76.8
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-18 98.6 64 71.9
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 5.1e-17 94.0 82 59.8
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 4.3e-16 90.9 96 50.0
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 6.2e-15 87.0 50 80.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 6.2e-15 87.0 50 80.0
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 1.1e-14 86.3 56 67.9
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-14 86.3 127 39.4
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 1.4e-14 85.9 55 65.5
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 1.8e-14 85.5 48 79.2
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.8e-14 85.5 63 68.3
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 3.1e-14 84.7 47 83.0
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-12 79.0 70 61.4
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 1.9e-11 75.5 71 62.0
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 2.4e-11 75.1 82 51.2
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 5.5e-11 73.9 95 49.5
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 6.0e-10 70.5 162 35.8
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 2.5e-08 65.1 176 33.5
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 3.3e-08 64.7 147 32.7
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 5.6e-08 63.9 39 71.8
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.3e-07 62.8 94 43.6
Medtr8g007590 Medicago truncatula HOM05D003729 ORTHO05D004384 2.4e-06 58.5 36 63.9
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 2.4e-06 58.5 32 84.4


User provided reference genes

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