Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013591 Daucus carota HOM05D003921 ORTHO05D004394 5.4e-173 610.9 310 100.0
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 1.8e-19 100.9 108 53.7
DCAR_029242 Daucus carota HOM05D000534 ORTHO05D018172 1.2e-15 88.2 57 70.2
DCAR_018080 Daucus carota HOM05D002169 ORTHO05D018172 2.3e-14 84.0 98 55.1
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 4.8e-12 76.3 96 43.8
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 6.2e-12 75.9 106 41.5
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 8.1e-12 75.5 96 45.8
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 8.1e-12 75.5 96 43.8
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 8.1e-12 75.5 96 43.8
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 2.4e-11 73.9 115 40.9
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 2.4e-11 73.9 117 41.9
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 3.1e-11 73.6 103 41.7
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 3.1e-11 73.6 105 41.9
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 3.1e-11 73.6 105 41.9
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 4.0e-11 73.2 100 44.0
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 5.3e-11 72.8 114 40.4
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 1.5e-10 71.2 115 40.0
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.0e-10 70.9 118 40.7
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.0e-10 70.9 135 38.5
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 4.5e-10 69.7 123 38.2
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 4.5e-10 69.7 123 38.2
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 5.8e-10 69.3 103 41.7
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 9.9e-10 68.6 148 34.5
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 1.3e-09 68.2 133 36.8
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 1.3e-09 68.2 130 38.5
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-09 68.2 118 37.3
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-09 68.2 118 37.3
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 1.3e-09 68.2 95 41.1
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 1.3e-09 68.2 112 37.5
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 1.3e-09 68.2 115 39.1
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 1.3e-09 68.2 101 40.6
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.7e-09 67.8 114 39.5
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 1.7e-09 67.8 112 38.4
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 1.7e-09 67.8 97 45.4
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 1.7e-09 67.8 101 40.6
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 1.7e-09 67.8 137 34.3
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 2.2e-09 67.4 100 41.0
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.2e-09 67.4 242 29.3
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 2.2e-09 67.4 112 40.2
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 2.9e-09 67.0 96 41.7
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.9e-09 67.0 118 36.4
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 2.9e-09 67.0 114 38.6
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.9e-09 67.0 101 40.6
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 3.8e-09 66.6 134 37.3
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.8e-09 66.6 147 34.0
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 3.8e-09 66.6 120 40.0
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 4.9e-09 66.2 112 37.5
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 4.9e-09 66.2 106 41.5
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 4.9e-09 66.2 106 41.5
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 6.4e-09 65.9 116 36.2
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 6.4e-09 65.9 134 35.8
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 8.4e-09 65.5 124 36.3
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 1.1e-08 65.1 134 36.6
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 1.1e-08 65.1 114 38.6
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 1.9e-08 64.3 112 38.4
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 1.9e-08 64.3 101 41.6
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.9e-08 64.3 112 37.5
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.4e-08 63.9 100 43.0
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.4e-08 63.9 103 37.9
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.4e-08 63.9 103 37.9
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 3.2e-08 63.5 112 39.3
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 3.2e-08 63.5 104 39.4
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 3.2e-08 63.5 129 38.0
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.4e-08 62.8 105 43.8
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 5.4e-08 62.8 91 41.8
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 7.1e-08 62.4 108 36.1
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 7.1e-08 62.4 85 38.8
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 9.3e-08 62.0 131 37.4
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 1.2e-07 61.6 63 47.6
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 1.2e-07 61.6 95 42.1
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 1.2e-07 61.6 101 39.6
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 1.6e-07 61.2 108 38.0
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.6e-07 61.2 103 36.9
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 2.1e-07 60.8 124 36.3
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 2.7e-07 60.5 110 41.8
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 2.7e-07 60.5 101 37.6
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 3.5e-07 60.1 107 35.5
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 4.6e-07 59.7 100 39.0
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 4.6e-07 59.7 116 37.9
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.0e-07 59.3 103 40.8
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 6.0e-07 59.3 116 37.1
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 7.9e-07 58.9 116 38.8
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.0e-06 58.5 107 42.1
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 1.0e-06 58.5 101 36.6
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 1.3e-06 58.2 116 39.7
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 1.3e-06 58.2 116 38.8
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 1.8e-06 57.8 138 36.2
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 2.3e-06 57.4 100 40.0
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 2.3e-06 57.4 97 38.1
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 3.0e-06 57.0 119 37.8
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 3.9e-06 56.6 102 39.2
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.1e-06 56.2 94 42.6
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 5.1e-06 56.2 112 35.7
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 5.1e-06 56.2 112 34.8
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 5.1e-06 56.2 104 35.6
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 5.1e-06 56.2 96 36.5
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 6.7e-06 55.8 104 36.5
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 6.7e-06 55.8 91 38.5
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 8.7e-06 55.5 100 40.0
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 8.7e-06 55.5 112 35.7


User provided reference genes

Program Settings